Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003349A_C01 KMC003349A_c01
(519 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_187696.1| glyoxalase II (hydroxyacylglutathione hydrolase... 95 6e-19
gb|AAC49867.1| glyoxalase II cytoplasmic isozyme [Arabidopsis th... 95 6e-19
ref|NP_440270.1| glyoxalase II [Synechocystis sp. PCC 6803] gi|2... 59 3e-08
ref|NP_203500.1| hydroxyacyl glutathione hydrolase; glyoxalase I... 55 4e-07
ref|NP_077246.1| hydroxyacyl glutathione hydrolase; glyoxylase 2... 55 6e-07
>ref|NP_187696.1| glyoxalase II (hydroxyacylglutathione hydrolase)(GLX2-2); protein
id: At3g10850.1, supported by cDNA: gi_15450456,
supported by cDNA: gi_2570341 [Arabidopsis thaliana]
gi|3913733|sp|O24496|GL2C_ARATH Hydroxyacylglutathione
hydrolase cytoplasmic (Glyoxalase II) (Glx II)
gi|1924921|emb|CAA69644.1| hydroxyacylglutathione
hydrolase [Arabidopsis thaliana]
gi|6630545|gb|AAF19564.1|AC011708_7
hydroxyacylglutathione hydrolase cytoplasmic (glyoxalase
II) (GLX II) [Arabidopsis thaliana]
gi|15450457|gb|AAK96522.1| AT3g10850/T7M13_7
[Arabidopsis thaliana] gi|23507765|gb|AAN38686.1|
At3g10850/T7M13_7 [Arabidopsis thaliana]
Length = 258
Score = 94.7 bits (234), Expect = 6e-19
Identities = 42/61 (68%), Positives = 50/61 (81%)
Frame = -1
Query: 519 LTWAQNQRQAGQPTIPSTIEEELETNPFMRIDLPEIQEKVGFKSPVEALGELRKLKDNWR 340
L WA+ QRQA PTIPST+EEELETNPFMR+D PEIQEK+G KSP++ + E+R KD WR
Sbjct: 198 LAWARQQRQADLPTIPSTLEEELETNPFMRVDKPEIQEKLGCKSPIDTMREVRNKKDQWR 257
Query: 339 G 337
G
Sbjct: 258 G 258
>gb|AAC49867.1| glyoxalase II cytoplasmic isozyme [Arabidopsis thaliana]
Length = 256
Score = 94.7 bits (234), Expect = 6e-19
Identities = 42/61 (68%), Positives = 50/61 (81%)
Frame = -1
Query: 519 LTWAQNQRQAGQPTIPSTIEEELETNPFMRIDLPEIQEKVGFKSPVEALGELRKLKDNWR 340
L WA+ QRQA PTIPST+EEELETNPFMR+D PEIQEK+G KSP++ + E+R KD WR
Sbjct: 196 LAWARQQRQADLPTIPSTLEEELETNPFMRVDKPEIQEKLGCKSPIDTMREVRNKKDQWR 255
Query: 339 G 337
G
Sbjct: 256 G 256
>ref|NP_440270.1| glyoxalase II [Synechocystis sp. PCC 6803]
gi|2494855|sp|P72933|GLO2_SYNY3 Probable
hydroxyacylglutathione hydrolase (Glyoxalase II) (Glx
II) gi|7446948|pir||S74799 glyoxalase II - Synechocystis
sp. (strain PCC 6803) gi|1652024|dbj|BAA16950.1|
glyoxalase II [Synechocystis sp. PCC 6803]
Length = 257
Score = 58.9 bits (141), Expect = 3e-08
Identities = 28/55 (50%), Positives = 34/55 (60%)
Frame = -1
Query: 507 QNQRQAGQPTIPSTIEEELETNPFMRIDLPEIQEKVGFKSPVEALGELRKLKDNW 343
Q RQ GQ TIPS + E TNPF+R D P IQ +VG P G+LR +KDN+
Sbjct: 203 QGDRQRGQATIPSWLGTEKRTNPFLRWDNPAIQARVGMTEPARVFGKLRGMKDNF 257
>ref|NP_203500.1| hydroxyacyl glutathione hydrolase; glyoxalase II; round spermatid
protein RSP29 [Rattus norvegicus]
gi|3913728|sp|O35952|GLO2_RAT Hydroxyacylglutathione
hydrolase (Glyoxalase II) (Glx II) (Round spermatid
protein RSP29) gi|7446953|pir||JC5826
hydroxyacylglutathione hydrolase (EC 3.1.2.6) - rat
gi|2459803|gb|AAC39944.1| RSP29 [Rattus norvegicus]
Length = 260
Score = 55.5 bits (132), Expect = 4e-07
Identities = 23/60 (38%), Positives = 36/60 (59%)
Frame = -1
Query: 519 LTWAQNQRQAGQPTIPSTIEEELETNPFMRIDLPEIQEKVGFKSPVEALGELRKLKDNWR 340
L WA+ + G+PT+PST+ EE NPFMR+ +Q+ G PV + +R+ KD ++
Sbjct: 197 LAWAKEKNAIGEPTVPSTLAEEFTYNPFMRVKEKTVQQHAGETDPVTTMRAIRREKDQFK 256
>ref|NP_077246.1| hydroxyacyl glutathione hydrolase; glyoxylase 2; glyoxalase II;
round spermatid protein RSP29 [Mus musculus]
gi|25452978|sp|Q99KB8|GLO2_MOUSE Hydroxyacylglutathione
hydrolase (Glyoxalase II) (Glx II)
gi|13435786|gb|AAH04749.1| Similar to hydroxyacyl
glutathione hydrolase [Mus musculus]
gi|18043760|gb|AAH19817.1| Unknown (protein for
MGC:29966) [Mus musculus]
Length = 260
Score = 54.7 bits (130), Expect = 6e-07
Identities = 23/60 (38%), Positives = 36/60 (59%)
Frame = -1
Query: 519 LTWAQNQRQAGQPTIPSTIEEELETNPFMRIDLPEIQEKVGFKSPVEALGELRKLKDNWR 340
L WA+ + G+PT+PST+ EE NPFMR+ +Q+ G PV + +R+ KD ++
Sbjct: 197 LAWAKEKYAIGEPTVPSTLAEEFTYNPFMRVKEKTVQQHAGETDPVTTMRAIRREKDQFK 256
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 429,410,118
Number of Sequences: 1393205
Number of extensions: 8747742
Number of successful extensions: 26849
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 26170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26841
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16442828304
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
