Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003342A_C01 KMC003342A_c01
(509 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
prf||2205248A Ser/Thr kinase 134 6e-31
gb|AAC61805.1| Pto kinase interactor 1 [Lycopersicon esculentum] 134 6e-31
ref|NP_191781.1| serine/threonine protein kinase-like protein; p... 126 2e-28
ref|NP_182229.1| putative protein kinase; protein id: At2g47060.... 125 3e-28
pir||A96522 protein F21D18.6 [imported] - Arabidopsis thaliana g... 107 6e-23
>prf||2205248A Ser/Thr kinase
Length = 370
Score = 134 bits (337), Expect = 6e-31
Identities = 61/102 (59%), Positives = 84/102 (81%)
Frame = +2
Query: 203 MSCFNCCEEDDFHKTAESGGPYVVKNPSGNDGNHHASETAKQGGQTVKPQPIEVPNISED 382
MSCF+CC++DD H+ ++G P++ N +GN+G A+E+A++ QTV QPI VP+I+ D
Sbjct: 1 MSCFSCCDDDDMHRATDNG-PFMAHNSAGNNGGQRATESAQRETQTVNIQPIAVPSIAVD 59
Query: 383 ELKEVTDNFGQDSLIGEGSYGRVYYGVLKNGQAAAIKKLDAS 508
ELK++TDNFG +LIGEGSYGRVY+GVLK+G+AAAIKKLD+S
Sbjct: 60 ELKDITDNFGSKALIGEGSYGRVYHGVLKSGRAAAIKKLDSS 101
>gb|AAC61805.1| Pto kinase interactor 1 [Lycopersicon esculentum]
Length = 354
Score = 134 bits (337), Expect = 6e-31
Identities = 61/102 (59%), Positives = 84/102 (81%)
Frame = +2
Query: 203 MSCFNCCEEDDFHKTAESGGPYVVKNPSGNDGNHHASETAKQGGQTVKPQPIEVPNISED 382
MSCF+CC++DD H+ ++G P++ N +GN+G A+E+A++ QTV QPI VP+I+ D
Sbjct: 1 MSCFSCCDDDDMHRATDNG-PFMAHNSAGNNGGQRATESAQRETQTVNIQPIAVPSIAVD 59
Query: 383 ELKEVTDNFGQDSLIGEGSYGRVYYGVLKNGQAAAIKKLDAS 508
ELK++TDNFG +LIGEGSYGRVY+GVLK+G+AAAIKKLD+S
Sbjct: 60 ELKDITDNFGSKALIGEGSYGRVYHGVLKSGRAAAIKKLDSS 101
>ref|NP_191781.1| serine/threonine protein kinase-like protein; protein id:
At3g62220.1 [Arabidopsis thaliana]
gi|11259788|pir||T48014 serine/threonine protein
kinase-like protein - Arabidopsis thaliana
gi|6899932|emb|CAB71882.1| serine/threonine protein
kinase-like protein [Arabidopsis thaliana]
Length = 361
Score = 126 bits (316), Expect = 2e-28
Identities = 62/102 (60%), Positives = 74/102 (71%)
Frame = +2
Query: 203 MSCFNCCEEDDFHKTAESGGPYVVKNPSGNDGNHHASETAKQGGQTVKPQPIEVPNISED 382
MSCF CC EDD + GG + K GNDG + SETA++G Q+VK QPIEV I D
Sbjct: 1 MSCFGCCREDDLPGANDYGGHNMTKQSGGNDGRRNGSETAQKGAQSVKVQPIEVAAILAD 60
Query: 383 ELKEVTDNFGQDSLIGEGSYGRVYYGVLKNGQAAAIKKLDAS 508
EL E T++FG +SLIGEGSY RVY+GVLKNGQ AAIKKLD++
Sbjct: 61 ELIEATNDFGTNSLIGEGSYARVYHGVLKNGQRAAIKKLDSN 102
>ref|NP_182229.1| putative protein kinase; protein id: At2g47060.1, supported by
cDNA: gi_13272438, supported by cDNA: gi_19424107,
supported by cDNA: gi_21281065 [Arabidopsis thaliana]
gi|7434311|pir||T02181 probable protein kinase
[imported] - Arabidopsis thaliana
gi|3522961|gb|AAC34243.1| putative protein kinase
[Arabidopsis thaliana]
gi|13272439|gb|AAK17158.1|AF325090_1 putative protein
kinase [Arabidopsis thaliana] gi|19424108|gb|AAL87347.1|
putative protein kinase [Arabidopsis thaliana]
gi|21281066|gb|AAM45092.1| putative protein kinase
[Arabidopsis thaliana]
Length = 365
Score = 125 bits (314), Expect = 3e-28
Identities = 67/106 (63%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Frame = +2
Query: 203 MSCFNCC-EEDDFHKTAESGGPYVVKN--PSGNDGNHH-ASETAKQGGQTVKPQPIEVPN 370
MSCF CC E+DD HKTA+ GG + P GND HH ASETA++G VK QPIEVP
Sbjct: 1 MSCFGCCGEDDDMHKTADYGGRHNQAKHFPPGNDARHHQASETAQKGPPVVKLQPIEVPI 60
Query: 371 ISEDELKEVTDNFGQDSLIGEGSYGRVYYGVLKNGQAAAIKKLDAS 508
I ELKE TD+FG +SLIGEGSYGRVYYGVL N +AIKKLD++
Sbjct: 61 IPFSELKEATDDFGSNSLIGEGSYGRVYYGVLNNDLPSAIKKLDSN 106
>pir||A96522 protein F21D18.6 [imported] - Arabidopsis thaliana
gi|8778533|gb|AAF79541.1|AC023673_29 F21D18.6
[Arabidopsis thaliana]
Length = 732
Score = 107 bits (268), Expect = 6e-23
Identities = 52/102 (50%), Positives = 67/102 (64%)
Frame = +2
Query: 203 MSCFNCCEEDDFHKTAESGGPYVVKNPSGNDGNHHASETAKQGGQTVKPQPIEVPNISED 382
MSCF C +DF ++G P NP+G +G H+ + QPI VP I D
Sbjct: 1 MSCFGWCGSEDFRNATDTG-PRPAHNPAGYNGGHYQRADPPMNQPVIPMQPISVPAIPVD 59
Query: 383 ELKEVTDNFGQDSLIGEGSYGRVYYGVLKNGQAAAIKKLDAS 508
EL+++TDN+G +LIGEGSYGRV+YGVLK+G AAAIKKLD+S
Sbjct: 60 ELRDITDNYGSKTLIGEGSYGRVFYGVLKSGGAAAIKKLDSS 101
Score = 87.0 bits (214), Expect = 1e-16
Identities = 48/117 (41%), Positives = 63/117 (53%), Gaps = 17/117 (14%)
Frame = +2
Query: 200 IMSCFNCCEEDDFHKTAESG---------------GPYV--VKNPSGNDGNHHASETAKQ 328
IMSCF C +D A++G P V + G +G HH
Sbjct: 350 IMSCFGWCGSEDVRNPADTGPSQAHNSIGSSHISTAPLVFELNRCKGYNGRHHQRADPPM 409
Query: 329 GGQTVKPQPIEVPNISEDELKEVTDNFGQDSLIGEGSYGRVYYGVLKNGQAAAIKKL 499
V QPI VP I DEL+++T+NF + L+G+GSYGRV+YGVLK+G+ AAIKKL
Sbjct: 410 NQPVVNMQPIAVPAIPVDELEDITENFSSEVLVGKGSYGRVFYGVLKSGKEAAIKKL 466
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 408,952,971
Number of Sequences: 1393205
Number of extensions: 8547033
Number of successful extensions: 29645
Number of sequences better than 10.0: 1291
Number of HSP's better than 10.0 without gapping: 28804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29601
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15942513235
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
