Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003327A_C01 KMC003327A_c01
(464 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T03739 nitrilase (EC 3.5.5.1) 4B - common tobacco gi|118161... 107 8e-23
sp|Q42965|NRL4_TOBAC Nitrilase 4 gi|7435979|pir||T03736 nitrilas... 104 5e-22
pir||T52266 nitrilase-like protein [imported] - rice gi|4835588|... 97 6e-20
ref|NP_197622.1| Nitrilase 4 (sp P46011); protein id: At5g22300.... 94 9e-19
gb|AAM65906.1| Nitrilase 4 (sp P46011) [Arabidopsis thaliana] 94 9e-19
>pir||T03739 nitrilase (EC 3.5.5.1) 4B - common tobacco
gi|1181615|dbj|BAA11770.1| nitrilase [Nicotiana tabacum]
Length = 348
Score = 107 bits (266), Expect = 8e-23
Identities = 51/61 (83%), Positives = 57/61 (92%)
Frame = -2
Query: 463 LAGPNYEGEALISADLDLGEIARAKFDFDVVGHYSRPEVLSLSVKDHPTNPVTFASTSTK 284
LAGPNYEGEALISADLDLGEIARAKFDFDVVGHY+RPEVLSL V+DH +PV+F STS+K
Sbjct: 283 LAGPNYEGEALISADLDLGEIARAKFDFDVVGHYARPEVLSLIVRDHAVSPVSFTSTSSK 342
Query: 283 S 281
+
Sbjct: 343 A 343
>sp|Q42965|NRL4_TOBAC Nitrilase 4 gi|7435979|pir||T03736 nitrilase (EC 3.5.5.1) - common
tobacco gi|1171482|dbj|BAA09645.1| nitrilase [Nicotiana
tabacum]
Length = 349
Score = 104 bits (259), Expect = 5e-22
Identities = 50/61 (81%), Positives = 56/61 (90%)
Frame = -2
Query: 463 LAGPNYEGEALISADLDLGEIARAKFDFDVVGHYSRPEVLSLSVKDHPTNPVTFASTSTK 284
LAGPNY GEALISADLDLGEIARAKFDFDVVGHY+RPEVLSL V+DH +PV+F STS+K
Sbjct: 284 LAGPNYVGEALISADLDLGEIARAKFDFDVVGHYARPEVLSLIVRDHAVSPVSFTSTSSK 343
Query: 283 S 281
+
Sbjct: 344 A 344
>pir||T52266 nitrilase-like protein [imported] - rice gi|4835588|dbj|BAA77679.1|
nitrilase-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 362
Score = 97.4 bits (241), Expect = 6e-20
Identities = 47/61 (77%), Positives = 52/61 (85%)
Frame = -2
Query: 463 LAGPNYEGEALISADLDLGEIARAKFDFDVVGHYSRPEVLSLSVKDHPTNPVTFASTSTK 284
LAGPNYEGEALI+ADLDLGEI RAKFDFDVVGHY+RPEVLSL V D P PV+F S + K
Sbjct: 290 LAGPNYEGEALITADLDLGEIVRAKFDFDVVGHYARPEVLSLVVNDQPHLPVSFTSAAEK 349
Query: 283 S 281
+
Sbjct: 350 T 350
>ref|NP_197622.1| Nitrilase 4 (sp P46011); protein id: At5g22300.1, supported by
cDNA: 6220., supported by cDNA: gi_13937219, supported
by cDNA: gi_508736 [Arabidopsis thaliana]
gi|1171771|sp|P46011|NRL4_ARATH Nitrilase 4
gi|25290268|pir||T52265 nitrilase (EC 3.5.5.1) 4
[imported] - Arabidopsis thaliana
gi|508737|gb|AAA19628.1| nitrilase
gi|9757810|dbj|BAB08328.1| Nitrilase 4 [Arabidopsis
thaliana] gi|13937220|gb|AAK50102.1|AF372965_1
AT5g22300/MWD9_8 [Arabidopsis thaliana]
gi|21700879|gb|AAM70563.1| AT5g22300/MWD9_8 [Arabidopsis
thaliana]
Length = 355
Score = 93.6 bits (231), Expect = 9e-19
Identities = 42/57 (73%), Positives = 51/57 (88%)
Frame = -2
Query: 463 LAGPNYEGEALISADLDLGEIARAKFDFDVVGHYSRPEVLSLSVKDHPTNPVTFAST 293
LAGPNY GEALI+ADLDLG+IARAKFDFDVVGHYSRPEV SL++++HP V+F ++
Sbjct: 291 LAGPNYRGEALITADLDLGDIARAKFDFDVVGHYSRPEVFSLNIREHPRKAVSFKTS 347
>gb|AAM65906.1| Nitrilase 4 (sp P46011) [Arabidopsis thaliana]
Length = 346
Score = 93.6 bits (231), Expect = 9e-19
Identities = 42/57 (73%), Positives = 51/57 (88%)
Frame = -2
Query: 463 LAGPNYEGEALISADLDLGEIARAKFDFDVVGHYSRPEVLSLSVKDHPTNPVTFAST 293
LAGPNY GEALI+ADLDLG+IARAKFDFDVVGHYSRPEV SL++++HP V+F ++
Sbjct: 282 LAGPNYRGEALITADLDLGDIARAKFDFDVVGHYSRPEVFSLNIREHPRKAVSFKTS 338
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 413,739,150
Number of Sequences: 1393205
Number of extensions: 8399588
Number of successful extensions: 16438
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 16103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16437
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 12291312054
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
