Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003324A_C01 KMC003324A_c01
(575 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||S47312 cysteine proteinase (EC 3.4.22.-) precursor - spring... 129 3e-29
pir||T46630 cysteine proteinase (EC 3.4.22.-) 1 precursor [simil... 119 4e-26
pir||T12039 cysteine proteinase (EC 3.4.22.-) 1 precursor - kidn... 119 4e-26
pir||T06529 cysteine proteinase (EC 3.4.22.-) - garden pea gi|11... 110 1e-23
pir||S49451 cysteine proteinase (EC 3.4.22.-) - chickpea gi|5585... 99 3e-20
>pir||S47312 cysteine proteinase (EC 3.4.22.-) precursor - spring vetch
gi|535473|emb|CAA53377.1| cysteine protease [Vicia
sativa]
Length = 368
Score = 129 bits (323), Expect = 3e-29
Identities = 61/78 (78%), Positives = 69/78 (88%), Gaps = 1/78 (1%)
Frame = -2
Query: 574 VVFGYGSENGKD*WLVRNSWGTHWGEDGYFKLERNVKHTYTGKCGIAMEASYPVKNGQNS 395
V+ GYGSENG D WLVRNSWGT+WGEDGYFK+ERNVK T+TGKCGIA+EASYPVK G+NS
Sbjct: 291 VIVGYGSENGLDYWLVRNSWGTNWGEDGYFKMERNVKGTHTGKCGIAVEASYPVKYGKNS 350
Query: 394 AIST-SAYENAEVYVSSA 344
A++T SAYE EV VSSA
Sbjct: 351 AVTTNSAYEKTEVLVSSA 368
>pir||T46630 cysteine proteinase (EC 3.4.22.-) 1 precursor [similarity] - kidney
bean gi|1256830|gb|AAB68374.1| cysteine endopeptidase 1
[Phaseolus vulgaris] gi|2959418|emb|CAA12118.1| cysteine
protease [Phaseolus vulgaris]
Length = 364
Score = 119 bits (297), Expect = 4e-26
Identities = 54/77 (70%), Positives = 62/77 (80%)
Frame = -2
Query: 574 VVFGYGSENGKD*WLVRNSWGTHWGEDGYFKLERNVKHTYTGKCGIAMEASYPVKNGQNS 395
VV GYG+ENG D WLVRNSWGT WGEDGYFK+ERNV+ T GKCGIAM+ SYPVK G NS
Sbjct: 288 VVVGYGTENGVDYWLVRNSWGTGWGEDGYFKMERNVRSTSEGKCGIAMDCSYPVKYGLNS 347
Query: 394 AISTSAYENAEVYVSSA 344
A+ +S YE+ E +SSA
Sbjct: 348 AVPSSVYESTEASISSA 364
>pir||T12039 cysteine proteinase (EC 3.4.22.-) 1 precursor - kidney bean
gi|2511689|emb|CAB17074.1| cysteine proteinase precursor
[Phaseolus vulgaris]
Length = 364
Score = 119 bits (297), Expect = 4e-26
Identities = 54/77 (70%), Positives = 62/77 (80%)
Frame = -2
Query: 574 VVFGYGSENGKD*WLVRNSWGTHWGEDGYFKLERNVKHTYTGKCGIAMEASYPVKNGQNS 395
VV GYG+ENG D WLVRNSWGT WGEDGYFK+ERNV+ T GKCGIAM+ SYPVK G NS
Sbjct: 288 VVVGYGTENGVDYWLVRNSWGTGWGEDGYFKMERNVRSTSEGKCGIAMDCSYPVKYGLNS 347
Query: 394 AISTSAYENAEVYVSSA 344
A+ +S YE+ E +SSA
Sbjct: 348 AVPSSVYESTEASISSA 364
>pir||T06529 cysteine proteinase (EC 3.4.22.-) - garden pea
gi|1174171|gb|AAB41816.1| NTH1 [Pisum sativum]
Length = 367
Score = 110 bits (275), Expect = 1e-23
Identities = 48/74 (64%), Positives = 60/74 (80%)
Frame = -2
Query: 574 VVFGYGSENGKD*WLVRNSWGTHWGEDGYFKLERNVKHTYTGKCGIAMEASYPVKNGQNS 395
VV GYGSENGKD WLV+NSWGT+WGE GY K+ERN+K+T TGKCGIAM+A+YP K +NS
Sbjct: 284 VVVGYGSENGKDYWLVKNSWGTNWGERGYLKIERNLKNTNTGKCGIAMDATYPTKLRENS 343
Query: 394 AISTSAYENAEVYV 353
++ S YE ++ V
Sbjct: 344 EVTNSGYEKLQMLV 357
>pir||S49451 cysteine proteinase (EC 3.4.22.-) - chickpea
gi|558563|emb|CAA57538.1| cysteine proteinase [Cicer
arietinum]
Length = 325
Score = 99.4 bits (246), Expect = 3e-20
Identities = 52/78 (66%), Positives = 59/78 (74%), Gaps = 1/78 (1%)
Frame = -2
Query: 574 VVFGYGSENGKD*WLVRNSWGTHWGEDGYFKL-ERNVKHTYTGKCGIAMEASYPVKNGQN 398
VV GYGSENG D WLVRNSWGT+WGEDGYFK+ RNVK Y KCGIAMEASYPVK GQN
Sbjct: 254 VVVGYGSENGVDYWLVRNSWGTNWGEDGYFKIASRNVKSLYR-KCGIAMEASYPVKYGQN 312
Query: 397 SAISTSAYENAEVYVSSA 344
+ + ++YV+SA
Sbjct: 313 TNSAA-----PQLYVTSA 325
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 477,982,927
Number of Sequences: 1393205
Number of extensions: 9922521
Number of successful extensions: 22939
Number of sequences better than 10.0: 979
Number of HSP's better than 10.0 without gapping: 22083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22647
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21530810025
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
