KMC003298A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC003298A_C01 KMC003298A_c01
aaaagaaaaattagtgatatgatttgtcatagatagaaaatgcaagaaagagatAAAAAA
ACAAATGAAAATAAGATTGAATAGAAAGTGAAGTGTGAATAAAATATTAATGTAGAATGT
AGATCTGCGCTATTTTCTTTTAGTACATCCATCAAGCAAGGGAGCTAGTTTAGTTTGCAG
GTTTGGTGACAAGGGTTCTGAGGTGGTCTATGAGGACGGTGAGAGAGTTGTAGGAGGATC
CACCTTGTTGAACGGCTTTCCAAGCTTTGTCTTGCACCTCTTTGGCTTTGCTTCTGATTT
CTGCACCTTCCTCACCCATTAAACTCTTTACTGCCTTCTCTATACGTTCTCCACTCACCA
CTTTCTTCTTACCATCATACGGTGATATGCTCCATTCAGCTGCGCCAACCTCCACCCCAA
AACCATGCACCTCTGTTATCAGCTTCTCGTTATAGTACTGGTCACTGAATCCTGGCATGG
TAATCATGGGAACCCCAGCACTGATAGCTTCCACAACCGCGTTCCATCCGCAGTGCGTTA
GAAACCCACCGGTCGCCAGATGATTCAAAATCAACGGCTGTGGGGCCCAACCCTTG


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC003298A_C01 KMC003298A_c01
         (596 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAA36410.1| UDP-glycose:flavonoid glycosyltransferase [Vigna...   240  1e-62
emb|CAB88666.1| putative UDP-glycose [Cicer arietinum]                212  3e-54
emb|CAB56231.1| betanidin-5-O-glucosyltransferase [Dorotheanthus...   155  4e-37
dbj|BAB63778.1| putative salicylate-induced glucosyltransferase ...   145  4e-34
dbj|BAB63773.1| putative salicylate-induced glucosyltransferase ...   141  6e-33

>dbj|BAA36410.1| UDP-glycose:flavonoid glycosyltransferase [Vigna mungo]
          Length = 477

 Score =  240 bits (612), Expect = 1e-62
 Identities = 115/137 (83%), Positives = 126/137 (91%), Gaps = 2/137 (1%)
 Frame = -2

Query: 595 KGWAPQPLILNHLATGGFLTHCGWNAVVEAISAGVPMITMPGFSDQYYNEKLITEVHGFG 416
           KGWAPQPLILNH A GGFLTHCGWNAVVEAISAGVPM+TMPGFSDQY+NEKLITEVHGFG
Sbjct: 336 KGWAPQPLILNHPAVGGFLTHCGWNAVVEAISAGVPMVTMPGFSDQYFNEKLITEVHGFG 395

Query: 415 VEVGAAEWSISPYDGKKKVVSGERIEKAVKSLM--GEEGAEIRSKAKEVQDKAWKAVQQG 242
           VEVGAAEWSISPY+GKK V+SGERIEKAVK LM  G EG +IR KAKE+QDKAW+AVQ+G
Sbjct: 396 VEVGAAEWSISPYEGKKTVLSGERIEKAVKRLMDKGNEGEKIRKKAKEMQDKAWRAVQEG 455

Query: 241 GSSYNSLTVLIDHLRTL 191
           GSS+N+LT LIDHL+ L
Sbjct: 456 GSSHNNLTALIDHLKAL 472

>emb|CAB88666.1| putative UDP-glycose [Cicer arietinum]
          Length = 438

 Score =  212 bits (540), Expect = 3e-54
 Identities = 101/138 (73%), Positives = 118/138 (85%), Gaps = 2/138 (1%)
 Frame = -2

Query: 595 KGWAPQPLILNHLATGGFLTHCGWNAVVEAISAGVPMITMPGFSDQYYNEKLITEVHGFG 416
           KGW PQPLIL+H + GGFLTHCGWNA VEAIS+GVPMITMPGF DQYYNEKL+TEVH  G
Sbjct: 293 KGWVPQPLILDHPSIGGFLTHCGWNATVEAISSGVPMITMPGFGDQYYNEKLVTEVHRIG 352

Query: 415 VEVGAAEWSISPYDGKKKVVSGERIEKAVKSLMGEEGA--EIRSKAKEVQDKAWKAVQQG 242
           VEVGAAEWS+SPYD KK VVS ERIEK VKSLM  +G   EIR +AK++++KAWKAVQ+G
Sbjct: 353 VEVGAAEWSMSPYDAKKTVVSWERIEKGVKSLMDGDGGGNEIRKRAKDMKEKAWKAVQEG 412

Query: 241 GSSYNSLTVLIDHLRTLV 188
           GSS N LT L+D+L+++V
Sbjct: 413 GSSQNCLTALVDYLQSVV 430

>emb|CAB56231.1| betanidin-5-O-glucosyltransferase [Dorotheanthus bellidiformis]
          Length = 489

 Score =  155 bits (392), Expect = 4e-37
 Identities = 71/134 (52%), Positives = 104/134 (76%), Gaps = 1/134 (0%)
 Frame = -2

Query: 595 KGWAPQPLILNHLATGGFLTHCGWNAVVEAISAGVPMITMPGFSDQYYNEKLITEVHGFG 416
           +GWAPQ LIL H ATGGFLTHCGWN+ +E ISAGVPM+T P F++Q++NE+L+T++   G
Sbjct: 350 RGWAPQVLILEHEATGGFLTHCGWNSALEGISAGVPMVTWPTFAEQFHNEQLLTQILKVG 409

Query: 415 VEVGAAEWSISPYDGKKKVVSGERIEKAVKSLM-GEEGAEIRSKAKEVQDKAWKAVQQGG 239
           V VG+ +W++ P    + V+  E IEKAV+ +M GEEG E R +AK++++ AW+A+++GG
Sbjct: 410 VAVGSKKWTLKP--SIEDVIKAEDIEKAVREVMVGEEGEERRRRAKKLKEMAWRAIEEGG 467

Query: 238 SSYNSLTVLIDHLR 197
           SSY+ L+ LI+ L+
Sbjct: 468 SSYSDLSALIEELK 481

>dbj|BAB63778.1| putative salicylate-induced glucosyltransferase [Oryza sativa
           (japonica cultivar-group)]
          Length = 496

 Score =  145 bits (366), Expect = 4e-34
 Identities = 72/134 (53%), Positives = 100/134 (73%), Gaps = 2/134 (1%)
 Frame = -2

Query: 595 KGWAPQPLILNHLATGGFLTHCGWNAVVEAISAGVPMITMPGFSDQYYNEKLITEVHGFG 416
           +GWAPQ L+LNH A GGF+THCGWN+V+EA+SAGVPM+  P ++DQ+YNEKLI E+   G
Sbjct: 355 RGWAPQVLVLNHPAVGGFVTHCGWNSVLEAVSAGVPMVAWPRYTDQFYNEKLIVEMLKVG 414

Query: 415 VEVGAAEWSISPYDGKKKVVSGERIEKAVKSLM--GEEGAEIRSKAKEVQDKAWKAVQQG 242
           V VGA E++ S  D + +V++GE I +A+  +M  GEEG  +R K KE+++KA  AV++G
Sbjct: 415 VGVGAREFA-SFIDHRSQVIAGEVIAEAIGRVMGEGEEGEAMRKKVKELREKARSAVKEG 473

Query: 241 GSSYNSLTVLIDHL 200
           GSSY+    L+D L
Sbjct: 474 GSSYDDAGRLLDEL 487

>dbj|BAB63773.1| putative salicylate-induced glucosyltransferase [Oryza sativa
           (japonica cultivar-group)]
          Length = 491

 Score =  141 bits (356), Expect = 6e-33
 Identities = 69/134 (51%), Positives = 99/134 (73%), Gaps = 2/134 (1%)
 Frame = -2

Query: 595 KGWAPQPLILNHLATGGFLTHCGWNAVVEAISAGVPMITMPGFSDQYYNEKLITEVHGFG 416
           +GWAPQ LILNH A GGF+THCGWN+ +EA++AGVPM+T P ++DQ+YNEKLITEV   G
Sbjct: 350 RGWAPQMLILNHPAVGGFVTHCGWNSTLEAVTAGVPMVTWPRYADQFYNEKLITEVLEVG 409

Query: 415 VEVGAAEWSISPYDGKKKVVSGERIEKAVKSLM--GEEGAEIRSKAKEVQDKAWKAVQQG 242
           V VG+ +++ S  + ++ ++ GE +  A+  +M  GEEG  IR KA E+  KA  A+++G
Sbjct: 410 VGVGSMDFA-SKLENRRVIIGGEVVAGAIGRVMGDGEEGEAIRKKATELGVKARGALEKG 468

Query: 241 GSSYNSLTVLIDHL 200
           GSSY+ + +L+D L
Sbjct: 469 GSSYDDVGILMDEL 482

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 539,625,853
Number of Sequences: 1393205
Number of extensions: 12449274
Number of successful extensions: 44355
Number of sequences better than 10.0: 738
Number of HSP's better than 10.0 without gapping: 41863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44017
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23140425222
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 GNf071f07 BP072638 1 113
2 MFB007d05_f BP034410 55 539
3 GNf032f10 BP069715 55 597
4 MR012b03_f BP076841 79 532
5 MR032g12_f BP078493 83 537




Lotus japonicus
Kazusa DNA Research Institute