Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003281A_C01 KMC003281A_c01
(688 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q41142|PDA1_RICCO Phospholipase D alpha 1 precursor (PLD 1) (... 261 5e-69
pir||T10171 phospholipase D (EC 3.1.4.4) - castor bean gi|169884... 261 5e-69
gb|AAG45485.1| phospholipase PLDa1 [Lycopersicon esculentum] 254 6e-67
sp|O04865|PDA1_VIGUN Phospholipase D alpha 1 (PLD alpha 1) (Chol... 254 6e-67
gb|AAF17557.1|AF201661_1 phospholipase D alpha [Lycopersicon esc... 254 6e-67
>sp|Q41142|PDA1_RICCO Phospholipase D alpha 1 precursor (PLD 1) (Choline phosphatase 1)
(Phosphatidylcholine-hydrolyzing phospholipase D 1)
gi|1438075|gb|AAB04095.1| phospholipase D
Length = 808
Score = 261 bits (668), Expect = 5e-69
Identities = 122/136 (89%), Positives = 131/136 (95%)
Frame = -2
Query: 687 GSANINQRSMDGARDSEIAMGAYQPYHLAARQPARGQIHGFRMSLWYEHLGMLDDSFNNP 508
GSANINQRSMDGARDSEIAMGAYQP+HL+ RQPARGQIHGFRMSLWYEHLGMLD+SF NP
Sbjct: 673 GSANINQRSMDGARDSEIAMGAYQPHHLSTRQPARGQIHGFRMSLWYEHLGMLDESFLNP 732
Query: 507 ENEECVRKVNQIADKYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGFEFFPDTKA 328
E+EECVRKVNQ+A+KYWDLYSSE+LEHDLPGHLLRYPIGV+ EGDVTELPG EFFPDTKA
Sbjct: 733 ESEECVRKVNQMAEKYWDLYSSETLEHDLPGHLLRYPIGVASEGDVTELPGTEFFPDTKA 792
Query: 327 RVLGGKADYLPPILTT 280
RVLG K+DYLPPILTT
Sbjct: 793 RVLGAKSDYLPPILTT 808
>pir||T10171 phospholipase D (EC 3.1.4.4) - castor bean gi|1698844|gb|AAB37305.1|
phospholipase D [Ricinus communis]
Length = 808
Score = 261 bits (668), Expect = 5e-69
Identities = 122/136 (89%), Positives = 131/136 (95%)
Frame = -2
Query: 687 GSANINQRSMDGARDSEIAMGAYQPYHLAARQPARGQIHGFRMSLWYEHLGMLDDSFNNP 508
GSANINQRSMDGARDSEIAMGAYQP+HL+ RQPARGQIHGFRMSLWYEHLGMLD+SF NP
Sbjct: 673 GSANINQRSMDGARDSEIAMGAYQPHHLSTRQPARGQIHGFRMSLWYEHLGMLDESFLNP 732
Query: 507 ENEECVRKVNQIADKYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGFEFFPDTKA 328
E+EECVRKVNQ+A+KYWDLYSSE+LEHDLPGHLLRYPIGV+ EGDVTELPG EFFPDTKA
Sbjct: 733 ESEECVRKVNQMAEKYWDLYSSETLEHDLPGHLLRYPIGVASEGDVTELPGTEFFPDTKA 792
Query: 327 RVLGGKADYLPPILTT 280
RVLG K+DYLPPILTT
Sbjct: 793 RVLGAKSDYLPPILTT 808
>gb|AAG45485.1| phospholipase PLDa1 [Lycopersicon esculentum]
Length = 809
Score = 254 bits (650), Expect = 6e-67
Identities = 118/136 (86%), Positives = 128/136 (93%)
Frame = -2
Query: 687 GSANINQRSMDGARDSEIAMGAYQPYHLAARQPARGQIHGFRMSLWYEHLGMLDDSFNNP 508
GSANINQRSMDGARDSEIAMGAYQPYHLA +PARGQ+HGFRM+LWYEHLGMLD++F +P
Sbjct: 674 GSANINQRSMDGARDSEIAMGAYQPYHLATSKPARGQVHGFRMALWYEHLGMLDETFQHP 733
Query: 507 ENEECVRKVNQIADKYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGFEFFPDTKA 328
E+EECVRKVNQIADKYWDLYSSESLE DLPGHLLRYPIGV+ EGD+TELPG EFFPDTKA
Sbjct: 734 ESEECVRKVNQIADKYWDLYSSESLERDLPGHLLRYPIGVASEGDITELPGHEFFPDTKA 793
Query: 327 RVLGGKADYLPPILTT 280
RVLG K+DYLPP LTT
Sbjct: 794 RVLGTKSDYLPPNLTT 809
>sp|O04865|PDA1_VIGUN Phospholipase D alpha 1 (PLD alpha 1) (Choline phosphatase 1)
(Phosphatidylcholine-hydrolyzing phospholipase D 1)
gi|7488886|pir||T11695 phospholipase D (EC 3.1.4.4) -
cowpea gi|1928979|gb|AAB51392.1| phospholipase D [Vigna
unguiculata]
Length = 809
Score = 254 bits (650), Expect = 6e-67
Identities = 118/136 (86%), Positives = 126/136 (91%)
Frame = -2
Query: 687 GSANINQRSMDGARDSEIAMGAYQPYHLAARQPARGQIHGFRMSLWYEHLGMLDDSFNNP 508
GSANINQRSMDGARDSEIAMG YQPYHLA QPARGQ++GFRMSLWYEHLGML D+F P
Sbjct: 674 GSANINQRSMDGARDSEIAMGGYQPYHLANTQPARGQVYGFRMSLWYEHLGMLHDTFQRP 733
Query: 507 ENEECVRKVNQIADKYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGFEFFPDTKA 328
E+EEC+ KVNQIADKYWDLYSSESLE DLPGHLLRYPIGV+ EG+VTELPGFEFFPDTKA
Sbjct: 734 ESEECINKVNQIADKYWDLYSSESLERDLPGHLLRYPIGVASEGEVTELPGFEFFPDTKA 793
Query: 327 RVLGGKADYLPPILTT 280
R+LG KADYLPPILTT
Sbjct: 794 RILGAKADYLPPILTT 809
>gb|AAF17557.1|AF201661_1 phospholipase D alpha [Lycopersicon esculentum]
Length = 809
Score = 254 bits (650), Expect = 6e-67
Identities = 118/136 (86%), Positives = 128/136 (93%)
Frame = -2
Query: 687 GSANINQRSMDGARDSEIAMGAYQPYHLAARQPARGQIHGFRMSLWYEHLGMLDDSFNNP 508
GSANINQRSMDGARDSEIAMGAYQPYHLA +PARGQ+HGFRM+LWYEHLGMLD++F +P
Sbjct: 674 GSANINQRSMDGARDSEIAMGAYQPYHLATSKPARGQVHGFRMALWYEHLGMLDETFQHP 733
Query: 507 ENEECVRKVNQIADKYWDLYSSESLEHDLPGHLLRYPIGVSGEGDVTELPGFEFFPDTKA 328
E+EECVRKVNQIADKYWDLYSSESLE DLPGHLLRYPIGV+ EGD+TELPG EFFPDTKA
Sbjct: 734 ESEECVRKVNQIADKYWDLYSSESLERDLPGHLLRYPIGVASEGDITELPGHEFFPDTKA 793
Query: 327 RVLGGKADYLPPILTT 280
RVLG K+DYLPP LTT
Sbjct: 794 RVLGTKSDYLPPNLTT 809
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 603,556,576
Number of Sequences: 1393205
Number of extensions: 13426461
Number of successful extensions: 34458
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 33184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34346
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 30835865868
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
