Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003261A_C02 KMC003261A_c02
(903 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF67262.1|AF165186_1 MAP kinase kinase [Nicotiana tabacum] 98 2e-19
emb|CAC69138.1| MAP kinase kinase [Medicago sativa subsp. x varia] 94 2e-18
emb|CAA04261.2| MAP kinase kinase [Lycopersicon esculentum] 90 5e-17
pir||T06583 protein kinase MEK1 - tomato 90 5e-17
emb|CAD45180.1| putative mitogen-activated protein kinase kinase... 88 2e-16
>gb|AAF67262.1|AF165186_1 MAP kinase kinase [Nicotiana tabacum]
Length = 357
Score = 97.8 bits (242), Expect = 2e-19
Identities = 44/69 (63%), Positives = 56/69 (80%)
Frame = -3
Query: 901 IVENPSPSVSFDEFSSEFCSFIAACLQKNPKDRPSAPELMRHPFINMYDDLAVDLSAYFS 722
IV+ P+PS D+FS +FCSFI+AC+QK+ KDR SA ELMRHPFI MYDDL +DL +YF+
Sbjct: 286 IVDQPAPSAPPDQFSPQFCSFISACVQKDQKDRLSANELMRHPFITMYDDLDIDLGSYFT 345
Query: 721 NAGPTFATI 695
+AGP AT+
Sbjct: 346 SAGPPLATL 354
>emb|CAC69138.1| MAP kinase kinase [Medicago sativa subsp. x varia]
Length = 356
Score = 94.4 bits (233), Expect = 2e-18
Identities = 46/69 (66%), Positives = 54/69 (77%)
Frame = -3
Query: 901 IVENPSPSVSFDEFSSEFCSFIAACLQKNPKDRPSAPELMRHPFINMYDDLAVDLSAYFS 722
IV+ P PS ++FSSEFCSFI+ACLQK+P R SA ELM PFI+MYDDL VDLSAYFS
Sbjct: 288 IVDKPPPSAPSEQFSSEFCSFISACLQKDPGSRLSAQELMELPFISMYDDLHVDLSAYFS 347
Query: 721 NAGPTFATI 695
+AG AT+
Sbjct: 348 DAGSPLATL 356
>emb|CAA04261.2| MAP kinase kinase [Lycopersicon esculentum]
Length = 357
Score = 89.7 bits (221), Expect = 5e-17
Identities = 40/69 (57%), Positives = 52/69 (74%)
Frame = -3
Query: 901 IVENPSPSVSFDEFSSEFCSFIAACLQKNPKDRPSAPELMRHPFINMYDDLAVDLSAYFS 722
IV+ P P D+FS +FCSFI+AC+QK+ KDR SA +LM HPFI MYDD +DL +YF+
Sbjct: 286 IVDQPEPCAPPDQFSPQFCSFISACVQKHQKDRLSANDLMSHPFITMYDDQDIDLGSYFT 345
Query: 721 NAGPTFATI 695
+AGP AT+
Sbjct: 346 SAGPPLATL 354
>pir||T06583 protein kinase MEK1 - tomato
Length = 357
Score = 89.7 bits (221), Expect = 5e-17
Identities = 40/69 (57%), Positives = 52/69 (74%)
Frame = -3
Query: 901 IVENPSPSVSFDEFSSEFCSFIAACLQKNPKDRPSAPELMRHPFINMYDDLAVDLSAYFS 722
IV+ P P D+FS +FCSFI+AC+QK+ KDR SA +LM HPFI MYDD +DL +YF+
Sbjct: 286 IVDQPEPCAPPDQFSPQFCSFISACVQKHQKDRLSANDLMSHPFITMYDDQDIDLGSYFT 345
Query: 721 NAGPTFATI 695
+AGP AT+
Sbjct: 346 SAGPPLATL 354
>emb|CAD45180.1| putative mitogen-activated protein kinase kinase [Oryza sativa]
Length = 333
Score = 87.8 bits (216), Expect = 2e-16
Identities = 37/68 (54%), Positives = 51/68 (74%)
Frame = -3
Query: 901 IVENPSPSVSFDEFSSEFCSFIAACLQKNPKDRPSAPELMRHPFINMYDDLAVDLSAYFS 722
+V++P PS D+FS EFCSF++AC+QKN DR SA L+ HPF++MYDDL +DL++YF+
Sbjct: 256 VVDHPPPSAPSDQFSEEFCSFVSACIQKNASDRSSAQILLNHPFLSMYDDLNIDLASYFT 315
Query: 721 NAGPTFAT 698
G AT
Sbjct: 316 TDGSPLAT 323
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 718,725,685
Number of Sequences: 1393205
Number of extensions: 14930750
Number of successful extensions: 32970
Number of sequences better than 10.0: 623
Number of HSP's better than 10.0 without gapping: 31862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32965
length of database: 448,689,247
effective HSP length: 123
effective length of database: 277,325,032
effective search space used: 49086530664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
