Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003257A_C01 KMC003257A_c01
(571 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_193677.2| pectinacetylesterase family; protein id: At4g19... 152 4e-36
pir||S68805 pectin acetylesterase (EC 3.1.1.-) precursor - mung ... 150 1e-35
ref|NP_198019.2| pectinacetylesterase, putative; protein id: At5... 119 3e-26
pir||T01197 pectin acetylesterase homolog F21E10.11 - Arabidopsi... 119 3e-26
gb|AAF26093.1|AC012393_19 putative pectinacetylesterase [Arabido... 113 2e-24
>ref|NP_193677.2| pectinacetylesterase family; protein id: At4g19420.1 [Arabidopsis
thaliana]
Length = 397
Score = 152 bits (383), Expect = 4e-36
Identities = 65/99 (65%), Positives = 76/99 (76%)
Frame = -2
Query: 570 DINNCSPDPLDLMQGFRTEFLRALTVLGNSPSKGMFIDSCYAHCPTEMQETWFTSDSPVV 391
DI NC P + +MQ FR EFL A+ LG S S+GMFIDSCY HC TE Q +WF DSP++
Sbjct: 293 DIKNCHPSQIKVMQDFRLEFLSAVIGLGRSSSRGMFIDSCYTHCQTETQTSWFWQDSPIL 352
Query: 390 NKTTIAKAVADWFYERRLFHQIDCPYPCNPTCHNRVFEP 274
N+TTIAKAV DW Y+R LF +IDCPYPCNPTCH+RVF P
Sbjct: 353 NRTTIAKAVGDWVYDRTLFQKIDCPYPCNPTCHHRVFTP 391
>pir||S68805 pectin acetylesterase (EC 3.1.1.-) precursor - mung bean
gi|1431629|emb|CAA67728.1| pectinacetylesterase
precursor [Vigna radiata]
Length = 399
Score = 150 bits (378), Expect = 1e-35
Identities = 65/98 (66%), Positives = 75/98 (76%)
Frame = -2
Query: 570 DINNCSPDPLDLMQGFRTEFLRALTVLGNSPSKGMFIDSCYAHCPTEMQETWFTSDSPVV 391
DI CS + L MQ FRT+FLRA +GNSPSKG FID CYAHC T QETW +DSPV+
Sbjct: 295 DIKKCSSNQLSAMQVFRTDFLRAFGAVGNSPSKGHFIDGCYAHCQTGTQETWLRNDSPVL 354
Query: 390 NKTTIAKAVADWFYERRLFHQIDCPYPCNPTCHNRVFE 277
TTIAKAV DW+Y+R+ F QIDC YPCNPTCHNR+F+
Sbjct: 355 GSTTIAKAVGDWYYDRKPFKQIDCAYPCNPTCHNRIFD 392
>ref|NP_198019.2| pectinacetylesterase, putative; protein id: At5g26665.1
[Arabidopsis thaliana]
Length = 423
Score = 119 bits (297), Expect = 3e-26
Identities = 48/93 (51%), Positives = 66/93 (70%)
Frame = -2
Query: 558 CSPDPLDLMQGFRTEFLRALTVLGNSPSKGMFIDSCYAHCPTEMQETWFTSDSPVVNKTT 379
C+P + +QGFR + LRA++ NS G+FI+SC+AHC TE Q+TWF DSPV++K
Sbjct: 330 CTPAQIRFLQGFRNQMLRAVSGFSNSKKNGLFINSCFAHCQTERQDTWFADDSPVIHKKA 389
Query: 378 IAKAVADWFYERRLFHQIDCPYPCNPTCHNRVF 280
+A AV DW+++R IDCPYPC+ +CHN VF
Sbjct: 390 VAIAVGDWYFDRAEVKLIDCPYPCDRSCHNLVF 422
>pir||T01197 pectin acetylesterase homolog F21E10.11 - Arabidopsis thaliana
gi|3047082|gb|AAC13595.1| similar to Vigna radiata
pectinacetylesterase precursor (GB:X99348) [Arabidopsis
thaliana]
Length = 422
Score = 119 bits (297), Expect = 3e-26
Identities = 48/93 (51%), Positives = 66/93 (70%)
Frame = -2
Query: 558 CSPDPLDLMQGFRTEFLRALTVLGNSPSKGMFIDSCYAHCPTEMQETWFTSDSPVVNKTT 379
C+P + +QGFR + LRA++ NS G+FI+SC+AHC TE Q+TWF DSPV++K
Sbjct: 329 CTPAQIRFLQGFRNQMLRAVSGFSNSKKNGLFINSCFAHCQTERQDTWFADDSPVIHKKA 388
Query: 378 IAKAVADWFYERRLFHQIDCPYPCNPTCHNRVF 280
+A AV DW+++R IDCPYPC+ +CHN VF
Sbjct: 389 VAIAVGDWYFDRAEVKLIDCPYPCDRSCHNLVF 421
>gb|AAF26093.1|AC012393_19 putative pectinacetylesterase [Arabidopsis thaliana]
Length = 371
Score = 113 bits (282), Expect = 2e-24
Identities = 46/93 (49%), Positives = 62/93 (66%)
Frame = -2
Query: 558 CSPDPLDLMQGFRTEFLRALTVLGNSPSKGMFIDSCYAHCPTEMQETWFTSDSPVVNKTT 379
C+P L +QGFR + LR + S G+FI+SC+AHC TE Q+TWF DSPV+ K
Sbjct: 278 CTPAQLRFLQGFREQMLRVVKGFSMSRQNGLFINSCFAHCQTERQDTWFADDSPVIRKKA 337
Query: 378 IAKAVADWFYERRLFHQIDCPYPCNPTCHNRVF 280
+A AV DW+++R +DCPYPC+ +CHN VF
Sbjct: 338 VAIAVGDWYFDRAEVKLVDCPYPCDKSCHNLVF 370
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 494,999,083
Number of Sequences: 1393205
Number of extensions: 10793502
Number of successful extensions: 24398
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 23464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24321
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20956655091
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
