Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003212A_C01 KMC003212A_c01
(617 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA10285.1| protein phosphatase [Cicer arietinum] 187 7e-47
sp|P36875|2AAA_PEA PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT A... 187 7e-47
gb|AAG29594.1|AF196287_1 Ser/Thr specific protein phosphatase 2A... 184 8e-46
pir||S51809 phosphoprotein phosphatase 2A 65K regulatory chain h... 168 6e-41
ref|NP_172790.2| protein phosphatase 2A regulatory subunit, puta... 168 6e-41
>emb|CAA10285.1| protein phosphatase [Cicer arietinum]
Length = 538
Score = 187 bits (476), Expect = 7e-47
Identities = 97/102 (95%), Positives = 100/102 (97%)
Frame = -1
Query: 617 DPHYLYRMTILQAISLLAPVLGSEITSSKLLPLVVNASKDRVPNIKFNVAKVLQSLIPIV 438
DPHYLYRMTIL AISLLAPVLGSEITSS LLPLVVNA+KDRVPNIKFNVAKVLQSLIPIV
Sbjct: 437 DPHYLYRMTILHAISLLAPVLGSEITSSNLLPLVVNAAKDRVPNIKFNVAKVLQSLIPIV 496
Query: 437 EESVVENTIRPCLVELSEDPDVDVRFFASQALQSSDQVKMSS 312
+ESVVE+TIRPCLVELSEDPDVDVRFFASQALQSSDQVKMSS
Sbjct: 497 DESVVESTIRPCLVELSEDPDVDVRFFASQALQSSDQVKMSS 538
Score = 50.8 bits (120), Expect = 1e-05
Identities = 24/79 (30%), Positives = 44/79 (55%)
Frame = -1
Query: 599 RMTILQAISLLAPVLGSEITSSKLLPLVVNASKDRVPNIKFNVAKVLQSLIPIVEESVVE 420
R + I +APVLG + T +LLP+ ++ KD P+++ N+ L + ++ ++
Sbjct: 287 RSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLS 346
Query: 419 NTIRPCLVELSEDPDVDVR 363
++ P +VEL+ED VR
Sbjct: 347 QSLLPAIVELAEDRHWRVR 365
Score = 36.6 bits (83), Expect = 0.27
Identities = 21/83 (25%), Positives = 40/83 (47%)
Frame = -1
Query: 599 RMTILQAISLLAPVLGSEITSSKLLPLVVNASKDRVPNIKFNVAKVLQSLIPIVEESVVE 420
R+ ++ + L +L + + +LP++VN S+D+ +++ VA L L V
Sbjct: 170 RLLAVEGCAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDSTR 229
Query: 419 NTIRPCLVELSEDPDVDVRFFAS 351
+ P V L D + +VR A+
Sbjct: 230 AELVPAYVRLLRDNEAEVRIAAA 252
Score = 33.1 bits (74), Expect = 3.0
Identities = 20/85 (23%), Positives = 35/85 (40%)
Frame = -1
Query: 617 DPHYLYRMTILQAISLLAPVLGSEITSSKLLPLVVNASKDRVPNIKFNVAKVLQSLIPIV 438
D + R + + L +G + T ++L+P V +D ++ A + I+
Sbjct: 203 DKSWRVRYMVANQLYELCEAVGPDSTRAELVPAYVRLLRDNEAEVRIAAAGKVTKFSRIL 262
Query: 437 EESVVENTIRPCLVELSEDPDVDVR 363
+ I PC+ ELS D VR
Sbjct: 263 NPELAIQHILPCVKELSTDSSQHVR 287
Score = 32.0 bits (71), Expect = 6.6
Identities = 23/80 (28%), Positives = 37/80 (45%)
Frame = -1
Query: 617 DPHYLYRMTILQAISLLAPVLGSEITSSKLLPLVVNASKDRVPNIKFNVAKVLQSLIPIV 438
D H+ R+ I++ I LLA LG KL L + KD+V +I+ A ++ L
Sbjct: 359 DRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAANNVKRLAEEF 418
Query: 437 EESVVENTIRPCLVELSEDP 378
I P ++++ DP
Sbjct: 419 GPEWAMQHIIPQVLDMINDP 438
>sp|P36875|2AAA_PEA PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT A (PR65)
gi|541969|pir||S40171 phosphoprotein phosphatase 2A
65kDa regulatory chain - garden pea (fragment)
gi|437901|emb|CAA81107.1| phosphoprotein phosphatase 2A
65kDa regulatory subunit [Pisum sativum]
Length = 395
Score = 187 bits (476), Expect = 7e-47
Identities = 97/102 (95%), Positives = 100/102 (97%)
Frame = -1
Query: 617 DPHYLYRMTILQAISLLAPVLGSEITSSKLLPLVVNASKDRVPNIKFNVAKVLQSLIPIV 438
DPHYLYRMTIL AISLLAPVLGSEITS+ LLPLVVNASKDRVPNIKFNVAKVLQSLIPIV
Sbjct: 294 DPHYLYRMTILHAISLLAPVLGSEITSTNLLPLVVNASKDRVPNIKFNVAKVLQSLIPIV 353
Query: 437 EESVVENTIRPCLVELSEDPDVDVRFFASQALQSSDQVKMSS 312
+ESVVE+TIRPCLVELSEDPDVDVRFFASQALQSSDQVKMSS
Sbjct: 354 DESVVESTIRPCLVELSEDPDVDVRFFASQALQSSDQVKMSS 395
Score = 50.8 bits (120), Expect = 1e-05
Identities = 24/79 (30%), Positives = 44/79 (55%)
Frame = -1
Query: 599 RMTILQAISLLAPVLGSEITSSKLLPLVVNASKDRVPNIKFNVAKVLQSLIPIVEESVVE 420
R + I +APVLG + T +LLP+ ++ KD P+++ N+ L + ++ ++
Sbjct: 143 RSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLS 202
Query: 419 NTIRPCLVELSEDPDVDVR 363
++ P +VEL+ED VR
Sbjct: 203 QSLLPAIVELAEDRHWRVR 221
Score = 36.2 bits (82), Expect = 0.35
Identities = 21/84 (25%), Positives = 40/84 (47%)
Frame = -1
Query: 602 YRMTILQAISLLAPVLGSEITSSKLLPLVVNASKDRVPNIKFNVAKVLQSLIPIVEESVV 423
+R ++ + L +L + + +LP++VN S+D+ +++ VA L L V
Sbjct: 25 FRFLAVEGCAALGKLLEPQDCLAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDST 84
Query: 422 ENTIRPCLVELSEDPDVDVRFFAS 351
+ + P V L D +VR A+
Sbjct: 85 KTELVPAYVRLLRDNVAEVRIAAA 108
Score = 36.2 bits (82), Expect = 0.35
Identities = 21/85 (24%), Positives = 36/85 (41%)
Frame = -1
Query: 617 DPHYLYRMTILQAISLLAPVLGSEITSSKLLPLVVNASKDRVPNIKFNVAKVLQSLIPIV 438
D + R + + L +G + T ++L+P V +D V ++ A + I+
Sbjct: 59 DKSWRVRYMVANQLYELCEAVGPDSTKTELVPAYVRLLRDNVAEVRIAAAGKVSKFSRIL 118
Query: 437 EESVVENTIRPCLVELSEDPDVDVR 363
+ I PC+ ELS D VR
Sbjct: 119 SPELAIQHILPCVKELSTDSSQHVR 143
>gb|AAG29594.1|AF196287_1 Ser/Thr specific protein phosphatase 2A A regulatory subunit beta
isoform [Medicago sativa subsp. x varia]
Length = 587
Score = 184 bits (467), Expect = 8e-46
Identities = 94/102 (92%), Positives = 100/102 (97%)
Frame = -1
Query: 617 DPHYLYRMTILQAISLLAPVLGSEITSSKLLPLVVNASKDRVPNIKFNVAKVLQSLIPIV 438
DPHYLYRMTIL AISLLAPVLGSEIT++ LLPLVVNA+KDRVPNIKFNVAKVLQSLIPIV
Sbjct: 486 DPHYLYRMTILHAISLLAPVLGSEITTTNLLPLVVNAAKDRVPNIKFNVAKVLQSLIPIV 545
Query: 437 EESVVENTIRPCLVELSEDPDVDVRFFASQALQSSDQVKMSS 312
+ESVVE+TI+PCLVELSEDPDVDVRFFASQALQSSDQVKMSS
Sbjct: 546 DESVVESTIKPCLVELSEDPDVDVRFFASQALQSSDQVKMSS 587
Score = 50.8 bits (120), Expect = 1e-05
Identities = 24/79 (30%), Positives = 44/79 (55%)
Frame = -1
Query: 599 RMTILQAISLLAPVLGSEITSSKLLPLVVNASKDRVPNIKFNVAKVLQSLIPIVEESVVE 420
R + I +APVLG + T +LLP+ ++ KD P+++ N+ L + ++ ++
Sbjct: 336 RSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLS 395
Query: 419 NTIRPCLVELSEDPDVDVR 363
++ P +VEL+ED VR
Sbjct: 396 QSLLPAIVELAEDRHWRVR 414
Score = 37.7 bits (86), Expect = 0.12
Identities = 21/83 (25%), Positives = 41/83 (49%)
Frame = -1
Query: 599 RMTILQAISLLAPVLGSEITSSKLLPLVVNASKDRVPNIKFNVAKVLQSLIPIVEESVVE 420
R+ ++ + L +L + + +LP++VN S+D+ +++ VA L L V +
Sbjct: 219 RLLAVEGCAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDSTK 278
Query: 419 NTIRPCLVELSEDPDVDVRFFAS 351
+ P V L D + +VR A+
Sbjct: 279 TELVPAYVRLLRDNEAEVRIAAA 301
Score = 33.5 bits (75), Expect = 2.3
Identities = 20/85 (23%), Positives = 35/85 (40%)
Frame = -1
Query: 617 DPHYLYRMTILQAISLLAPVLGSEITSSKLLPLVVNASKDRVPNIKFNVAKVLQSLIPIV 438
D + R + + L +G + T ++L+P V +D ++ A + I+
Sbjct: 252 DKSWRVRYMVANQLYELCEAVGPDSTKTELVPAYVRLLRDNEAEVRIAAAGKVTKFSRIL 311
Query: 437 EESVVENTIRPCLVELSEDPDVDVR 363
+ I PC+ ELS D VR
Sbjct: 312 SPELAIQHILPCVKELSTDSSQHVR 336
Score = 32.0 bits (71), Expect = 6.6
Identities = 23/80 (28%), Positives = 37/80 (45%)
Frame = -1
Query: 617 DPHYLYRMTILQAISLLAPVLGSEITSSKLLPLVVNASKDRVPNIKFNVAKVLQSLIPIV 438
D H+ R+ I++ I LLA LG KL L + KD+V +I+ A ++ L
Sbjct: 408 DRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAATNIKRLAEEF 467
Query: 437 EESVVENTIRPCLVELSEDP 378
I P ++++ DP
Sbjct: 468 GPEWAMQHIIPQVLDMVNDP 487
>pir||S51809 phosphoprotein phosphatase 2A 65K regulatory chain homolog pDF2 -
Arabidopsis thaliana (fragment)
gi|683504|emb|CAA57529.1| protein phosphatase 2A 65 kDa
regulatory subunit [Arabidopsis thaliana]
Length = 508
Score = 168 bits (425), Expect = 6e-41
Identities = 83/102 (81%), Positives = 95/102 (92%)
Frame = -1
Query: 617 DPHYLYRMTILQAISLLAPVLGSEITSSKLLPLVVNASKDRVPNIKFNVAKVLQSLIPIV 438
+PHYLYRMTIL+A+SLLAPV+GSEIT SKLLP V+ ASKDRVPNIKFNVAK++QSLIPIV
Sbjct: 407 NPHYLYRMTILRAVSLLAPVMGSEITCSKLLPAVITASKDRVPNIKFNVAKMMQSLIPIV 466
Query: 437 EESVVENTIRPCLVELSEDPDVDVRFFASQALQSSDQVKMSS 312
+++VVEN IRPCLVELSEDPDVDVR+FA+QALQS D V MSS
Sbjct: 467 DQAVVENMIRPCLVELSEDPDVDVRYFANQALQSIDNVMMSS 508
Score = 50.1 bits (118), Expect = 2e-05
Identities = 24/79 (30%), Positives = 43/79 (54%)
Frame = -1
Query: 599 RMTILQAISLLAPVLGSEITSSKLLPLVVNASKDRVPNIKFNVAKVLQSLIPIVEESVVE 420
R + I +APVLG + T LLP+ ++ KD P+++ N+ L + ++ ++
Sbjct: 257 RSALASVIMGMAPVLGKDATIEHLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLS 316
Query: 419 NTIRPCLVELSEDPDVDVR 363
++ P +VEL+ED VR
Sbjct: 317 QSLLPAIVELAEDRHWRVR 335
Score = 35.8 bits (81), Expect = 0.46
Identities = 20/83 (24%), Positives = 39/83 (46%)
Frame = -1
Query: 599 RMTILQAISLLAPVLGSEITSSKLLPLVVNASKDRVPNIKFNVAKVLQSLIPIVEESVVE 420
R+ ++ + L +L + + +LP++VN S+D+ +++ VA L L V
Sbjct: 140 RLLAVEGCAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTR 199
Query: 419 NTIRPCLVELSEDPDVDVRFFAS 351
+ P L D + +VR A+
Sbjct: 200 TDLVPAYARLLRDNEAEVRIAAA 222
Score = 32.3 bits (72), Expect = 5.0
Identities = 20/85 (23%), Positives = 33/85 (38%)
Frame = -1
Query: 617 DPHYLYRMTILQAISLLAPVLGSEITSSKLLPLVVNASKDRVPNIKFNVAKVLQSLIPIV 438
D + R + + L +G E T + L+P +D ++ A + I+
Sbjct: 173 DKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYARLLRDNEAEVRIAAAGKVTKFCRIL 232
Query: 437 EESVVENTIRPCLVELSEDPDVDVR 363
+ I PC+ ELS D VR
Sbjct: 233 NPELAIQHILPCVKELSSDSSQHVR 257
>ref|NP_172790.2| protein phosphatase 2A regulatory subunit, putative; protein id:
At1g13320.1, supported by cDNA: gi_20466587 [Arabidopsis
thaliana] gi|20466588|gb|AAM20611.1| protein phosphatase
2A regulatory subunit, putative [Arabidopsis thaliana]
gi|27311991|gb|AAO00961.1| protein phosphatase 2A
regulatory subunit, putative [Arabidopsis thaliana]
Length = 587
Score = 168 bits (425), Expect = 6e-41
Identities = 83/102 (81%), Positives = 95/102 (92%)
Frame = -1
Query: 617 DPHYLYRMTILQAISLLAPVLGSEITSSKLLPLVVNASKDRVPNIKFNVAKVLQSLIPIV 438
+PHYLYRMTIL+A+SLLAPV+GSEIT SKLLP V+ ASKDRVPNIKFNVAK++QSLIPIV
Sbjct: 486 NPHYLYRMTILRAVSLLAPVMGSEITCSKLLPAVITASKDRVPNIKFNVAKMMQSLIPIV 545
Query: 437 EESVVENTIRPCLVELSEDPDVDVRFFASQALQSSDQVKMSS 312
+++VVEN IRPCLVELSEDPDVDVR+FA+QALQS D V MSS
Sbjct: 546 DQAVVENMIRPCLVELSEDPDVDVRYFANQALQSIDNVMMSS 587
Score = 50.1 bits (118), Expect = 2e-05
Identities = 24/79 (30%), Positives = 43/79 (54%)
Frame = -1
Query: 599 RMTILQAISLLAPVLGSEITSSKLLPLVVNASKDRVPNIKFNVAKVLQSLIPIVEESVVE 420
R + I +APVLG + T LLP+ ++ KD P+++ N+ L + ++ ++
Sbjct: 336 RSALASVIMGMAPVLGKDATIEHLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLS 395
Query: 419 NTIRPCLVELSEDPDVDVR 363
++ P +VEL+ED VR
Sbjct: 396 QSLLPAIVELAEDRHWRVR 414
Score = 34.3 bits (77), Expect = 1.3
Identities = 20/83 (24%), Positives = 39/83 (46%)
Frame = -1
Query: 599 RMTILQAISLLAPVLGSEITSSKLLPLVVNASKDRVPNIKFNVAKVLQSLIPIVEESVVE 420
R+ ++ + L +L + + +LP++VN S+D+ +++ VA L L V
Sbjct: 219 RLLAVEGCAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTR 278
Query: 419 NTIRPCLVELSEDPDVDVRFFAS 351
+ P L D + +VR A+
Sbjct: 279 TDLVPAYARLLCDNEAEVRIAAA 301
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 480,858,085
Number of Sequences: 1393205
Number of extensions: 9570019
Number of successful extensions: 26498
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 25230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26414
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 24733321959
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
