Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003197A_C01 KMC003197A_c01
(567 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF27918.1|AF220202_1 soluble inorganic pyrophosphatase [Malu... 179 3e-44
gb|AAM65537.1| inorganic pyrophosphatase-like protein [Arabidops... 174 9e-43
ref|NP_190930.1| inorganic pyrophosphatase -like protein; protei... 174 9e-43
pir||T07399 probable inorganic diphosphatase (EC 3.6.1.1), solub... 163 1e-39
gb|AAD46520.1|AF149116_1 soluble inorganic pyrophosphatase [Popu... 162 3e-39
>gb|AAF27918.1|AF220202_1 soluble inorganic pyrophosphatase [Malus x domestica]
Length = 228
Score = 179 bits (453), Expect = 3e-44
Identities = 84/91 (92%), Positives = 91/91 (99%)
Frame = -1
Query: 567 AIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKDLPPHRLAEIRRFFEDYKKNENKEVA 388
AIGLMPMIDQGEKDD+IIAVCADDPEYRHYNDIK+LPPHRLAEIRRFFEDYKKNENKEVA
Sbjct: 138 AIGLMPMIDQGEKDDQIIAVCADDPEYRHYNDIKELPPHRLAEIRRFFEDYKKNENKEVA 197
Query: 387 VNDFLPASTAFEAIKHSMSLYADYVVESLRR 295
V+DFLPASTAF+AI+HSM+LYADY+VESLRR
Sbjct: 198 VDDFLPASTAFDAIQHSMNLYADYIVESLRR 228
>gb|AAM65537.1| inorganic pyrophosphatase-like protein [Arabidopsis thaliana]
Length = 216
Score = 174 bits (440), Expect = 9e-43
Identities = 80/91 (87%), Positives = 88/91 (95%)
Frame = -1
Query: 567 AIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKDLPPHRLAEIRRFFEDYKKNENKEVA 388
AIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDI +LPPHR+AEIRRFFEDYKKNENKEVA
Sbjct: 126 AIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDISELPPHRMAEIRRFFEDYKKNENKEVA 185
Query: 387 VNDFLPASTAFEAIKHSMSLYADYVVESLRR 295
VNDFLPA+ A++A++HSM LYADYVVE+LRR
Sbjct: 186 VNDFLPATAAYDAVQHSMDLYADYVVENLRR 216
>ref|NP_190930.1| inorganic pyrophosphatase -like protein; protein id: At3g53620.1,
supported by cDNA: 40186. [Arabidopsis thaliana]
gi|11266401|pir||T45902 inorganic pyrophosphatase-like
protein - Arabidopsis thaliana
gi|6729513|emb|CAB67669.1| inorganic
pyrophosphatase-like protein [Arabidopsis thaliana]
Length = 216
Score = 174 bits (440), Expect = 9e-43
Identities = 80/91 (87%), Positives = 88/91 (95%)
Frame = -1
Query: 567 AIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKDLPPHRLAEIRRFFEDYKKNENKEVA 388
AIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDI +LPPHR+AEIRRFFEDYKKNENKEVA
Sbjct: 126 AIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDISELPPHRMAEIRRFFEDYKKNENKEVA 185
Query: 387 VNDFLPASTAFEAIKHSMSLYADYVVESLRR 295
VNDFLPA+ A++A++HSM LYADYVVE+LRR
Sbjct: 186 VNDFLPATAAYDAVQHSMDLYADYVVENLRR 216
>pir||T07399 probable inorganic diphosphatase (EC 3.6.1.1), soluble - potato
gi|2706450|emb|CAA12415.1| magnesium dependent soluble
inorganic pyrophosphatase [Solanum tuberosum]
Length = 217
Score = 163 bits (413), Expect = 1e-39
Identities = 76/91 (83%), Positives = 84/91 (91%)
Frame = -1
Query: 567 AIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKDLPPHRLAEIRRFFEDYKKNENKEVA 388
AIG+MPMIDQGEKD+KIIAVCADDPEY+ Y DI +LPPHRLAEIRRFFEDYKKNENKEVA
Sbjct: 127 AIGVMPMIDQGEKDEKIIAVCADDPEYKDYADINELPPHRLAEIRRFFEDYKKNENKEVA 186
Query: 387 VNDFLPASTAFEAIKHSMSLYADYVVESLRR 295
VNDFLP+ AFEA++HS LYADY+VESLRR
Sbjct: 187 VNDFLPSDKAFEAVQHSQDLYADYIVESLRR 217
>gb|AAD46520.1|AF149116_1 soluble inorganic pyrophosphatase [Populus tremula x Populus
tremuloides]
Length = 215
Score = 162 bits (410), Expect = 3e-39
Identities = 75/91 (82%), Positives = 86/91 (94%)
Frame = -1
Query: 567 AIGLMPMIDQGEKDDKIIAVCADDPEYRHYNDIKDLPPHRLAEIRRFFEDYKKNENKEVA 388
AIGLMPMIDQGEKDDKIIAVCADDPEY+HY DIK+L PHRL+EIRRFFEDYKKNENKEVA
Sbjct: 125 AIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDIKELAPHRLSEIRRFFEDYKKNENKEVA 184
Query: 387 VNDFLPASTAFEAIKHSMSLYADYVVESLRR 295
VNDFLP++TA EAI++SM LYA+Y++ +LRR
Sbjct: 185 VNDFLPSNTAVEAIQYSMDLYAEYILHTLRR 215
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 454,018,038
Number of Sequences: 1393205
Number of extensions: 9450059
Number of successful extensions: 24688
Number of sequences better than 10.0: 256
Number of HSP's better than 10.0 without gapping: 23840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24644
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20669577624
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
