Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003189A_C01 KMC003189A_c01
(595 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q41140|PFPA_RICCO Pyrophosphate--fructose 6-phosphate 1-phosp... 205 4e-52
gb|AAC67587.1| pyrophosphate-dependent phosphofructokinase alpha... 203 1e-51
ref|NP_177781.1| putative pyrophosphate-dependent phosphofructok... 193 2e-48
sp|P21342|PFPA_SOLTU Pyrophosphate--fructose 6-phosphate 1-phosp... 182 2e-45
ref|NP_173519.1| putative pyrophosphate-dependent phosphofructok... 181 5e-45
>sp|Q41140|PFPA_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase alpha
subunit (PFP) (6-phosphofructokinase, pyrophosphate
dependent) (Pyrophosphate-dependent
6-phosphofructose-1-kinase) (PPI-PFK)
gi|7447687|pir||T10102 diphosphate-fructose-6-phosphate
1-phosphotransferase (EC 2.7.1.90) alpha chain - castor
bean gi|483547|emb|CAA83682.1| pyrophosphate-dependent
phosphofructokinase alpha subunit [Ricinus communis]
Length = 617
Score = 205 bits (521), Expect = 4e-52
Identities = 98/126 (77%), Positives = 113/126 (88%)
Frame = -1
Query: 595 SSMMTVKRWSPNPGATSIGKPAIHPATVELRGKAYDLLRKNATSFLLDDIYRNPGPLQFE 416
++MMTVKRW+ NPGATSIGKPAIHPA V+L+GKAY+LLR NA FL+DD+YRNPGPLQFE
Sbjct: 485 AAMMTVKRWAQNPGATSIGKPAIHPAAVDLKGKAYELLRLNAVKFLMDDLYRNPGPLQFE 544
Query: 415 GPGADAKPITLSVEDQDYMGRIKQLQVYLEQVRNIVKPGCPQEVLKAALSAMGSVTEVLS 236
GPGADAKPITL VEDQDYMGRIK+LQ YL++VR IVKPGC QEVLKAALS M SVT+VL
Sbjct: 545 GPGADAKPITLCVEDQDYMGRIKKLQEYLDKVRTIVKPGCSQEVLKAALSVMASVTDVLL 604
Query: 235 VMTSSA 218
M+S++
Sbjct: 605 TMSSTS 610
>gb|AAC67587.1| pyrophosphate-dependent phosphofructokinase alpha subunit [Citrus x
paradisi]
Length = 615
Score = 203 bits (517), Expect = 1e-51
Identities = 97/131 (74%), Positives = 116/131 (88%)
Frame = -1
Query: 595 SSMMTVKRWSPNPGATSIGKPAIHPATVELRGKAYDLLRKNATSFLLDDIYRNPGPLQFE 416
+SMMTVKRWS NPGA+SIG+PAI+PATV++RGKAY+LLR+NAT FLLDD+YRNPGP+QF+
Sbjct: 485 TSMMTVKRWSQNPGASSIGRPAINPATVDMRGKAYELLRQNATRFLLDDLYRNPGPVQFD 544
Query: 415 GPGADAKPITLSVEDQDYMGRIKQLQVYLEQVRNIVKPGCPQEVLKAALSAMGSVTEVLS 236
GPGADAK +TL VED+DYMGRIK+LQ YL++VR IVKPGC QEVLKAALS M SVTEVLS
Sbjct: 545 GPGADAKAVTLCVEDRDYMGRIKELQKYLDEVRTIVKPGCSQEVLKAALSVMASVTEVLS 604
Query: 235 VMTSSAASNGL 203
+++S L
Sbjct: 605 AISASGGQTTL 615
>ref|NP_177781.1| putative pyrophosphate-dependent phosphofructokinase alpha subunit;
protein id: At1g76550.1 [Arabidopsis thaliana]
gi|25314958|pir||E96793 hypothetical protein F14G6.15
[imported] - Arabidopsis thaliana
gi|12323969|gb|AAG51940.1|AC015450_1 putative
pyrophosphate-dependent phosphofructokinase alpha
subunit; 63231-59202 [Arabidopsis thaliana]
Length = 617
Score = 193 bits (490), Expect = 2e-48
Identities = 89/128 (69%), Positives = 114/128 (88%)
Frame = -1
Query: 595 SSMMTVKRWSPNPGATSIGKPAIHPATVELRGKAYDLLRKNATSFLLDDIYRNPGPLQFE 416
S+MMTVKRWS N G+T+IG+P IHPA+V+L+GKAYDLLR+NA FL++D+YRNPGP+Q++
Sbjct: 485 SAMMTVKRWSQNSGSTTIGRPVIHPASVDLKGKAYDLLRQNAQKFLMEDMYRNPGPVQYD 544
Query: 415 GPGADAKPITLSVEDQDYMGRIKQLQVYLEQVRNIVKPGCPQEVLKAALSAMGSVTEVLS 236
GPGADAK ++L VEDQDYMG+IK+LQ YL+QVR IVKPGC Q+VLKAALS M SVT+VL+
Sbjct: 545 GPGADAKAVSLCVEDQDYMGKIKKLQEYLDQVRTIVKPGCSQDVLKAALSVMASVTDVLT 604
Query: 235 VMTSSAAS 212
++SS+ S
Sbjct: 605 TISSSSTS 612
>sp|P21342|PFPA_SOLTU Pyrophosphate--fructose 6-phosphate 1-phosphotransferase alpha
subunit (PFP) (6-phosphofructokinase,
pyrophosphate-dependent) (Pyrophosphate-dependent
6-phosphofructose-1-kinase) (PPI-PFK)
gi|482294|pir||A36094 diphosphate-fructose-6-phosphate
1-phosphotransferase (EC 2.7.1.90) alpha chain - potato
(cv. Kennebec) gi|169538|gb|AAA63451.1|
pyrophosphate-fructose 6-phosphate 1-phosphotransferase
alpha-subunit
Length = 616
Score = 182 bits (463), Expect = 2e-45
Identities = 88/127 (69%), Positives = 109/127 (85%)
Frame = -1
Query: 595 SSMMTVKRWSPNPGATSIGKPAIHPATVELRGKAYDLLRKNATSFLLDDIYRNPGPLQFE 416
S+MMTVKR+ PG SIG PA+HPATV+LRGK+Y+LL +NAT FLLDD+YRNPGPLQF+
Sbjct: 485 SAMMTVKRYGRGPGKASIGVPALHPATVDLRGKSYELLSQNATKFLLDDVYRNPGPLQFD 544
Query: 415 GPGADAKPITLSVEDQDYMGRIKQLQVYLEQVRNIVKPGCPQEVLKAALSAMGSVTEVLS 236
GPGADAK +L VED DY+G IK+LQ YL++VR IVKPGC Q+VLKAALSAM SVT++LS
Sbjct: 545 GPGADAKAGSLVVEDADYIGAIKKLQEYLDKVRTIVKPGCSQDVLKAALSAMASVTDILS 604
Query: 235 VMTSSAA 215
V++S ++
Sbjct: 605 VISSPSS 611
>ref|NP_173519.1| putative pyrophosphate-dependent phosphofructokinase alpha subunit;
protein id: At1g20950.1, supported by cDNA: gi_16648970
[Arabidopsis thaliana] gi|25314966|pir||D86342
hypothetical protein F9H16.6 - Arabidopsis thaliana
gi|4836893|gb|AAD30596.1|AC007369_6
pyrophosphate-dependent phosphofructokinase alpha
subunit [Arabidopsis thaliana]
gi|16648971|gb|AAL24337.1| pyrophosphate-dependent
phosphofructokinase alpha subunit [Arabidopsis thaliana]
Length = 614
Score = 181 bits (460), Expect = 5e-45
Identities = 87/127 (68%), Positives = 109/127 (85%), Gaps = 2/127 (1%)
Frame = -1
Query: 595 SSMMTVKRWSPNPG--ATSIGKPAIHPATVELRGKAYDLLRKNATSFLLDDIYRNPGPLQ 422
++MMTVK WS + TSIG+PAIHPA V+L+GKAYDLLR+NA FL++D+YRNPGPLQ
Sbjct: 485 TAMMTVKHWSQDASYTLTSIGRPAIHPAMVDLKGKAYDLLRQNAQKFLMEDLYRNPGPLQ 544
Query: 421 FEGPGADAKPITLSVEDQDYMGRIKQLQVYLEQVRNIVKPGCPQEVLKAALSAMGSVTEV 242
++GPGADAK ++L VEDQDYMGRIK+LQ YL+QVR IVKPGC Q+VLKAALS M SVT+V
Sbjct: 545 YDGPGADAKAVSLCVEDQDYMGRIKKLQEYLDQVRTIVKPGCSQDVLKAALSVMASVTDV 604
Query: 241 LSVMTSS 221
L+ ++S+
Sbjct: 605 LTTISSN 611
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 510,470,983
Number of Sequences: 1393205
Number of extensions: 10830520
Number of successful extensions: 26408
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 24954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26404
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22854740960
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
