Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003186A_C01 KMC003186A_c01
(629 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF97979.1|AC000103_29 F21J9.9 [Arabidopsis thaliana] 102 5e-21
ref|NP_173852.1| hypothetical protein; protein id: At1g24430.1, ... 102 5e-21
ref|NP_189233.1| acyltransferase family; protein id: At3g26040.1... 98 1e-19
dbj|BAB01067.1| acetyltranferase-like protein [Arabidopsis thali... 98 1e-19
ref|NP_189647.1| acyltransferase family; protein id: At3g30280.1... 89 6e-17
>gb|AAF97979.1|AC000103_29 F21J9.9 [Arabidopsis thaliana]
Length = 435
Score = 102 bits (253), Expect = 5e-21
Identities = 56/139 (40%), Positives = 84/139 (60%), Gaps = 1/139 (0%)
Frame = -1
Query: 629 VRKLKEGLREFSEVYPNKFGGNNKD-LTFISECLKQASPIPEPLNKALPAPEPCGFDLKE 453
V +++E +R+ VY K +N+ L F++ KQAS GF +
Sbjct: 311 VDQMREEIRKIDAVYVKKLQEDNRGHLEFLN---KQAS----------------GF-VNG 350
Query: 452 KEFFFTYTSLCRLPMYETDFGWGKPIWVTATGMPMMNAVFFMDTKDGGGIEALVNMDEKN 273
+ F++TSLC+ P+YE DFGWGKP+WV + M N V F+DTK+G GIEA +N+D+ +
Sbjct: 351 EIVSFSFTSLCKFPVYEADFGWGKPLWVASARMSYKNLVAFIDTKEGDGIEAWINLDQND 410
Query: 272 MARFERNAELLQFASLNPN 216
M+RFE + ELL++ S NP+
Sbjct: 411 MSRFEADEELLRYVSSNPS 429
>ref|NP_173852.1| hypothetical protein; protein id: At1g24430.1, supported by cDNA:
gi_19310415 [Arabidopsis thaliana]
Length = 331
Score = 102 bits (253), Expect = 5e-21
Identities = 56/139 (40%), Positives = 84/139 (60%), Gaps = 1/139 (0%)
Frame = -1
Query: 629 VRKLKEGLREFSEVYPNKFGGNNKD-LTFISECLKQASPIPEPLNKALPAPEPCGFDLKE 453
V +++E +R+ VY K +N+ L F++ KQAS GF +
Sbjct: 207 VDQMREEIRKIDAVYVKKLQEDNRGHLEFLN---KQAS----------------GF-VNG 246
Query: 452 KEFFFTYTSLCRLPMYETDFGWGKPIWVTATGMPMMNAVFFMDTKDGGGIEALVNMDEKN 273
+ F++TSLC+ P+YE DFGWGKP+WV + M N V F+DTK+G GIEA +N+D+ +
Sbjct: 247 EIVSFSFTSLCKFPVYEADFGWGKPLWVASARMSYKNLVAFIDTKEGDGIEAWINLDQND 306
Query: 272 MARFERNAELLQFASLNPN 216
M+RFE + ELL++ S NP+
Sbjct: 307 MSRFEADEELLRYVSSNPS 325
>ref|NP_189233.1| acyltransferase family; protein id: At3g26040.1 [Arabidopsis
thaliana]
Length = 442
Score = 97.8 bits (242), Expect = 1e-19
Identities = 54/148 (36%), Positives = 82/148 (54%), Gaps = 2/148 (1%)
Frame = -1
Query: 629 VRKLKEGLREFSEVYPNKFGGNNKDLTFISECLKQASPIPEPLNKALPAPEPCGFDLKEK 450
V K+++ + F +++ K GN I K+A + +
Sbjct: 312 VSKIRKAKQRFRDIHIPKLVGNPNATEIICSYQKEAGDM-----------------IASG 354
Query: 449 EF-FFTYTSLCRLPMYETDFGWGKPIWVTATGMPMMNAVFFMDTKDGGGIEALVNMDEKN 273
+F F+ ++S CR +YETDFGWGKP+WV + N V +DTK+ GGIEA VN++E+
Sbjct: 355 DFDFYIFSSACRFGLYETDFGWGKPVWVGFPSVRQKNIVTLLDTKEAGGIEAWVNLNEQE 414
Query: 272 MARFERNAELLQFASLNPNP-WPYLSIM 192
M FE++ ELLQFASLNP+ P+L ++
Sbjct: 415 MNLFEQDRELLQFASLNPSVIQPFLHVL 442
>dbj|BAB01067.1| acetyltranferase-like protein [Arabidopsis thaliana]
Length = 455
Score = 97.8 bits (242), Expect = 1e-19
Identities = 54/148 (36%), Positives = 82/148 (54%), Gaps = 2/148 (1%)
Frame = -1
Query: 629 VRKLKEGLREFSEVYPNKFGGNNKDLTFISECLKQASPIPEPLNKALPAPEPCGFDLKEK 450
V K+++ + F +++ K GN I K+A + +
Sbjct: 325 VSKIRKAKQRFRDIHIPKLVGNPNATEIICSYQKEAGDM-----------------IASG 367
Query: 449 EF-FFTYTSLCRLPMYETDFGWGKPIWVTATGMPMMNAVFFMDTKDGGGIEALVNMDEKN 273
+F F+ ++S CR +YETDFGWGKP+WV + N V +DTK+ GGIEA VN++E+
Sbjct: 368 DFDFYIFSSACRFGLYETDFGWGKPVWVGFPSVRQKNIVTLLDTKEAGGIEAWVNLNEQE 427
Query: 272 MARFERNAELLQFASLNPNP-WPYLSIM 192
M FE++ ELLQFASLNP+ P+L ++
Sbjct: 428 MNLFEQDRELLQFASLNPSVIQPFLHVL 455
>ref|NP_189647.1| acyltransferase family; protein id: At3g30280.1 [Arabidopsis
thaliana] gi|9294332|dbj|BAB02229.1|
acetyl-CoA:benzylalcohol acetyltranferase-like protein
[Arabidopsis thaliana]
Length = 443
Score = 88.6 bits (218), Expect = 6e-17
Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = -1
Query: 440 FTYTSLCRLPMYETDFGWGKPIWVTATGMPMM-NAVFFMDTKDGGGIEALVNMDEKNMAR 264
+T +S C+LP+YE FGWG P+W+ PM+ N +D+KDG GIEA V + E+NM
Sbjct: 365 YTVSSWCKLPLYEASFGWGSPVWIAGNVAPMLENVTMLIDSKDGQGIEAFVTLPEENMLS 424
Query: 263 FERNAELLQFASLNPN 216
E+N ELL FAS+NP+
Sbjct: 425 LEQNTELLAFASVNPS 440
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 544,224,222
Number of Sequences: 1393205
Number of extensions: 12547060
Number of successful extensions: 36524
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 33084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36387
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25870486187
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
