Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003181A_C01 KMC003181A_c01
(538 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_201024.1| putative protein; protein id: At5g62180.1 [Arab... 71 7e-12
gb|AAF77578.1|AF072533_1 pepper esterase [Capsicum annuum] 61 7e-09
gb|AAM65164.1| unknown [Arabidopsis thaliana] 49 1e-08
dbj|BAC19941.1| similar to carboxylesterase [Oryza sativa (japon... 51 1e-05
ref|NP_182085.1| unknown protein; protein id: At2g45610.1 [Arabi... 45 4e-04
>ref|NP_201024.1| putative protein; protein id: At5g62180.1 [Arabidopsis thaliana]
gi|8809631|dbj|BAA97182.1| HSR203J protein-like protein
[Arabidopsis thaliana]
Length = 327
Score = 71.2 bits (173), Expect = 7e-12
Identities = 46/140 (32%), Positives = 76/140 (53%), Gaps = 3/140 (2%)
Frame = -3
Query: 536 GESAGGNIAYFAGLRAATQLDQIKPLNIKALVLIQPFFGGTKRTSSELRLVEDGTIPS-- 363
G SAGGN+AY GLR+ + + PL I+ L+L PFFGG +R+ SE+RL+ D P
Sbjct: 164 GTSAGGNLAYNVGLRSVDSVSDLSPLQIRGLILHHPFFGGEERSESEIRLMNDQVCPPIV 223
Query: 362 ANY*YDVE-PVIAGRR*P*S*VF*SNG*RAGLRFWIRLRSLDGGLKCLGVKWDPLVDRQR 186
+ +D+ PV R + + G ++ L + +G + DP++D Q+
Sbjct: 224 TDVMWDLSLPVGVDR----DHEYSNPTVGDGSEKLEKIGRLRWKVMMIGGEDDPMIDLQK 279
Query: 185 ELVQLLKGKGVRVMGYFIEG 126
++ +L+K KGV V+ ++ G
Sbjct: 280 DVAKLMKKKGVEVVEHYTGG 299
Score = 52.0 bits (123), Expect = 5e-06
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = -1
Query: 367 PQPITDMMWNLSLPVGADRDHEYSNPT 287
P +TD+MW+LSLPVG DRDHEYSNPT
Sbjct: 220 PPIVTDVMWDLSLPVGVDRDHEYSNPT 246
>gb|AAF77578.1|AF072533_1 pepper esterase [Capsicum annuum]
Length = 328
Score = 61.2 bits (147), Expect = 7e-09
Identities = 47/154 (30%), Positives = 68/154 (43%), Gaps = 17/154 (11%)
Frame = -3
Query: 536 GESAGGNIAYFAGLR-AATQLDQIKPLNIKALVLIQPFFGGTKRTSSELRLVEDG----- 375
G S GGNIAY AGLR AA +++P+ IK L+L QP+F G RT SE +L +D
Sbjct: 163 GSSCGGNIAYHAGLRVAAGAYKELEPVKIKGLILHQPYFSGKNRTESEEKLKDDQLLPLH 222
Query: 374 --------TIPSANY*YDVE---PVIAGRR*P*S*VF*SNG*RAGLRFWIRLRSLDGGLK 228
++P +D E P + G G + + + +
Sbjct: 223 AIDKMFDLSLPKGTLDHDHEYSNPFLNG----------------GSKHLDDVIAQGWKIL 266
Query: 227 CLGVKWDPLVDRQRELVQLLKGKGVRVMGYFIEG 126
GV DPLVD R ++ KG++ F +G
Sbjct: 267 VTGVSGDPLVDNARNFANFMEEKGIKTFKLFGDG 300
Score = 33.9 bits (76), Expect(2) = 0.021
Identities = 17/31 (54%), Positives = 19/31 (60%), Gaps = 1/31 (3%)
Frame = -1
Query: 367 PQPITDMMWNLSLPVGA-DRDHEYSNPTAEG 278
P D M++LSLP G D DHEYSNP G
Sbjct: 220 PLHAIDKMFDLSLPKGTLDHDHEYSNPFLNG 250
Score = 25.0 bits (53), Expect(2) = 0.021
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2
Query: 285 LKGGPKVLDQIKELGWRVEVFGCEVGP 205
L GG K LD + GW++ V G P
Sbjct: 248 LNGGSKHLDDVIAQGWKILVTGVSGDP 274
>gb|AAM65164.1| unknown [Arabidopsis thaliana]
Length = 344
Score = 48.5 bits (114), Expect(2) = 1e-08
Identities = 23/47 (48%), Positives = 29/47 (60%)
Frame = -3
Query: 536 GESAGGNIAYFAGLRAATQLDQIKPLNIKALVLIQPFFGGTKRTSSE 396
G+SAG NIAY +R L++K ++LI PFFGG RTSSE
Sbjct: 182 GDSAGANIAYQVAVRIMASGKYANTLHLKGIILIHPFFGGESRTSSE 228
Score = 32.0 bits (71), Expect(2) = 1e-08
Identities = 12/22 (54%), Positives = 15/22 (67%)
Frame = -1
Query: 355 TDMMWNLSLPVGADRDHEYSNP 290
+D W L+LP GA RDH + NP
Sbjct: 244 SDAYWRLALPRGASRDHPWCNP 265
>dbj|BAC19941.1| similar to carboxylesterase [Oryza sativa (japonica
cultivar-group)]
Length = 358
Score = 50.8 bits (120), Expect = 1e-05
Identities = 49/137 (35%), Positives = 63/137 (45%), Gaps = 7/137 (5%)
Frame = -3
Query: 536 GESAGGNIAYFAGLR-AATQLDQIKPLNIKALVLIQPFFGGTKRTSSELRLVEDGTIPSA 360
GESAGGNI + R AAT K L + ++ +QP+FGG +RT SEL L DG P
Sbjct: 191 GESAGGNIVHQVANRWAATWQPTAKNLRLAGMIPVQPYFGGEERTPSELAL--DGVAPVV 248
Query: 359 NY*YD------VEPVIAGRR*P*S*VF*SNG*RAGLRFWIRLRSLDGGLKCLGVKWDPLV 198
N PV A R P + V N A + + +G +DPL
Sbjct: 249 NLRRSDFSWKAFLPVGADRDHPAAHVTDENAELA--------EAFPPAMVVIG-GFDPLQ 299
Query: 197 DRQRELVQLLKGKGVRV 147
D QR V +L+ KG V
Sbjct: 300 DWQRRYVDVLRRKGKAV 316
Score = 31.2 bits (69), Expect = 8.3
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 355 TDMMWNLSLPVGADRDHEYSNPTAE 281
+D W LPVGADRDH ++ T E
Sbjct: 253 SDFSWKAFLPVGADRDHPAAHVTDE 277
>ref|NP_182085.1| unknown protein; protein id: At2g45610.1 [Arabidopsis thaliana]
gi|7485628|pir||T00874 hypothetical protein At2g45610
[imported] - Arabidopsis thaliana
gi|2979556|gb|AAC06165.1| unknown protein [Arabidopsis
thaliana]
Length = 324
Score = 45.4 bits (106), Expect = 4e-04
Identities = 44/143 (30%), Positives = 63/143 (43%), Gaps = 5/143 (3%)
Frame = -3
Query: 536 GESAGGNIAYFAGLRAATQLDQIKPLNIKALVLIQPFFGGTKRTSSELRLVEDGT--IPS 363
G S G NIA+ LR+ + PL I V QP FGG RT SEL+ D +P+
Sbjct: 169 GSSNGANIAFQLALRSLDH--DLTPLQIDGCVFYQPLFGGKTRTKSELKNFADPVMPVPA 226
Query: 362 ANY*YDVE-PVIAGRR*P*S*VF*SNG*RAGLRFWIRLRSLDGGLKCL--GVKWDPLVDR 192
+ +++ PV R + L + + + +CL G D +DR
Sbjct: 227 VDAMWELSLPVGVDR---------DHRYCNPLGYLPQKEKVGRLGRCLVIGYGGDTSLDR 277
Query: 191 QRELVQLLKGKGVRVMGYFIEGG 123
Q++ V LL GVRV F + G
Sbjct: 278 QQDFVNLLVAAGVRVEARFDDAG 300
Score = 45.1 bits (105), Expect = 6e-04
Identities = 18/26 (69%), Positives = 18/26 (69%)
Frame = -1
Query: 367 PQPITDMMWNLSLPVGADRDHEYSNP 290
P P D MW LSLPVG DRDH Y NP
Sbjct: 223 PVPAVDAMWELSLPVGVDRDHRYCNP 248
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 506,153,686
Number of Sequences: 1393205
Number of extensions: 11968055
Number of successful extensions: 32147
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 30124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32030
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18173652336
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
