Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003132A_C01 KMC003132A_c01
(616 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG13987.1|AF298828_1 putative cinnamoyl-CoA reductase [Prunu... 197 9e-50
ref|NP_200657.1| cinnamoyl-CoA reductase - like protein; protein... 194 8e-49
gb|AAO60009.1| putative cinnamoyl-CoA reductase [Oryza sativa (j... 168 5e-41
ref|NP_178345.1| putative cinnamoyl-CoA reductase; protein id: A... 119 3e-26
dbj|BAB68104.1| putative cinnamoyl CoA reductase [Oryza sativa (... 114 1e-24
>gb|AAG13987.1|AF298828_1 putative cinnamoyl-CoA reductase [Prunus avium]
Length = 159
Score = 197 bits (501), Expect = 9e-50
Identities = 93/116 (80%), Positives = 107/116 (92%)
Frame = -3
Query: 611 LVRLLQGCAETYENFFMGLVHFKDVALAHILVYENKGAAGRHMCVEAISHYGDFVAKVAE 432
LVRLL+GC ETYEN FMG VHFKDVALAHIL++ENK A GRH+CVEAISHYGDFVAKVAE
Sbjct: 44 LVRLLEGCIETYENIFMGSVHFKDVALAHILLHENKSATGRHLCVEAISHYGDFVAKVAE 103
Query: 431 LYPEFNVPKMQRDTQPGLLRAKDGSKKLMDLGLEFIPMEEIIKDAVESLKDKGFIS 264
LYPE+ VP + +DTQPGLLR K+G+KKLM+LGL+FIPM++IIKDAVESLK+KGFIS
Sbjct: 104 LYPEYKVPSLPKDTQPGLLREKNGAKKLMNLGLDFIPMDQIIKDAVESLKNKGFIS 159
>ref|NP_200657.1| cinnamoyl-CoA reductase - like protein; protein id: At5g58490.1,
supported by cDNA: 30064., supported by cDNA:
gi_17979314 [Arabidopsis thaliana]
gi|10177026|dbj|BAB10264.1| dihydroflavonol
4-reductase-like [Arabidopsis thaliana]
gi|21592589|gb|AAM64538.1| cinnamoyl-CoA reductase-like
protein [Arabidopsis thaliana]
gi|27754235|gb|AAO22571.1| putative cinnamoyl-CoA
reductase [Arabidopsis thaliana]
Length = 324
Score = 194 bits (493), Expect = 8e-49
Identities = 94/117 (80%), Positives = 105/117 (89%)
Frame = -3
Query: 614 MLVRLLQGCAETYENFFMGLVHFKDVALAHILVYENKGAAGRHMCVEAISHYGDFVAKVA 435
ML+RLLQGC ETYENFFMG VHFKDVALAHILVYE+ + GRH+CVEAISHYGDFVAKVA
Sbjct: 208 MLLRLLQGCTETYENFFMGSVHFKDVALAHILVYEDPYSKGRHLCVEAISHYGDFVAKVA 267
Query: 434 ELYPEFNVPKMQRDTQPGLLRAKDGSKKLMDLGLEFIPMEEIIKDAVESLKDKGFIS 264
ELYP +NVPK+ R+TQPGLLR K+ SKKL+DLGL+FI MEEIIK+ VESLK KGFIS
Sbjct: 268 ELYPNYNVPKLPRETQPGLLRDKNASKKLIDLGLKFISMEEIIKEGVESLKSKGFIS 324
>gb|AAO60009.1| putative cinnamoyl-CoA reductase [Oryza sativa (japonica
cultivar-group)] gi|29124112|gb|AAO65853.1| putative
cinnamoyl-CoA reductase [Oryza sativa (japonica
cultivar-group)]
Length = 334
Score = 168 bits (426), Expect = 5e-41
Identities = 77/117 (65%), Positives = 101/117 (85%)
Frame = -3
Query: 614 MLVRLLQGCAETYENFFMGLVHFKDVALAHILVYENKGAAGRHMCVEAISHYGDFVAKVA 435
MLVRLL+GC E Y +F+MG VH +DVALAHIL+YEN A+GRH+CV++I+H+ DF +KVA
Sbjct: 218 MLVRLLEGCTEEYADFYMGPVHVEDVALAHILLYENPSASGRHLCVQSIAHWSDFASKVA 277
Query: 434 ELYPEFNVPKMQRDTQPGLLRAKDGSKKLMDLGLEFIPMEEIIKDAVESLKDKGFIS 264
ELYPE+ VPK+ ++TQPGL+RA+ SKKL+ LGL+F PME+II+D+VESLK +GFIS
Sbjct: 278 ELYPEYKVPKLPKETQPGLVRAEAASKKLIALGLQFSPMEKIIRDSVESLKSRGFIS 334
>ref|NP_178345.1| putative cinnamoyl-CoA reductase; protein id: At2g02400.1
[Arabidopsis thaliana] gi|25284019|pir||C84436 probable
cinnamoyl-CoA reductase [imported] - Arabidopsis
thaliana gi|3894172|gb|AAC78522.1| putative
cinnamoyl-CoA reductase [Arabidopsis thaliana]
gi|28973736|gb|AAO64184.1| putative cinnamoyl-CoA
reductase [Arabidopsis thaliana]
Length = 318
Score = 119 bits (298), Expect = 3e-26
Identities = 52/116 (44%), Positives = 83/116 (70%)
Frame = -3
Query: 614 MLVRLLQGCAETYENFFMGLVHFKDVALAHILVYENKGAAGRHMCVEAISHYGDFVAKVA 435
+L++LLQG ET E+ ++G+VH KDVA H++++E A+GR +C I + +F A V+
Sbjct: 203 VLLQLLQGSTETQEHHWLGVVHVKDVAKGHVMLFETPDASGRFLCTNGIYQFSEFAALVS 262
Query: 434 ELYPEFNVPKMQRDTQPGLLRAKDGSKKLMDLGLEFIPMEEIIKDAVESLKDKGFI 267
+L+PEF V K ++TQPGL D +K+L++LGL F +E+ +K+ V+SL+DKGF+
Sbjct: 263 KLFPEFAVHKFDKETQPGLTSCNDAAKRLIELGLVFTAVEDAVKETVQSLRDKGFL 318
>dbj|BAB68104.1| putative cinnamoyl CoA reductase [Oryza sativa (japonica
cultivar-group)]
Length = 326
Score = 114 bits (285), Expect = 1e-24
Identities = 53/116 (45%), Positives = 83/116 (70%)
Frame = -3
Query: 614 MLVRLLQGCAETYENFFMGLVHFKDVALAHILVYENKGAAGRHMCVEAISHYGDFVAKVA 435
ML+++L G ++F++G V +DVA + +++YEN A GRH+C+E+I DF K+A
Sbjct: 211 MLLQILGGQRFDIDDFYIGCVDVRDVAQSAVVIYENTSAQGRHLCIESIERLIDFHDKLA 270
Query: 434 ELYPEFNVPKMQRDTQPGLLRAKDGSKKLMDLGLEFIPMEEIIKDAVESLKDKGFI 267
ELYPEF + ++Q D Q ++R+K SKKL+DLG+ FIP E+ I+D+V+ L+ KG+I
Sbjct: 271 ELYPEFPIHRIQEDKQGWVVRSKAASKKLIDLGVHFIPFEKTIRDSVDCLRSKGYI 326
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 518,062,734
Number of Sequences: 1393205
Number of extensions: 11247966
Number of successful extensions: 27436
Number of sequences better than 10.0: 185
Number of HSP's better than 10.0 without gapping: 26581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27362
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24854530794
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
