>KMC003061A_C01 KMC003061A_c01
agaatcccaacttaataaacacatgccaataacatatataaaatccgcaagccaatactt
ACATCAAAATGAACATCTATCATAAGGTCTCAAAAGAACAACAATATGAAAGGTTTATGC
AGGAGGAATCAAATACAACTAAAAAGTAAGAAAATGACTTATCCTTATAGCAATTAGAAT
TAACCAAAATACTAGCCACCGCATGTTGAGGGTCTACCAAAAAGATAACAACTCATGCGT
CATGCGTAGATCAACAAAGCTTAAGAACTCACTGCCATGAAACTTGTGAATTAGCTAATT
GAAAGAAAACCAAAGGGGTGAGTCACCAATAGGACAAAGGGAGCAAAGGGGACAAGCAGT
TAAAGTAAATATAGAGTGTAATTCAATCTATTCCAAAACCCTTGTGATGAGGAAGAAGAG
CTAAGTTTCTTCTTGTGACTCTAAGCATTAACAATTAGTAACAAAGAATTCATATAAGAA
TTCCCAACCACTATACCTATGCCGTAA

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC003061A_C01 KMC003061A_c01
         (507 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_803444.1| NADH dehydrogenase subunit 5 [Antheraea pernyi]...    31  9.3

>ref|NP_803444.1| NADH dehydrogenase subunit 5 [Antheraea pernyi]
           gi|28974765|gb|AAO53280.1| NADH dehydrogenase subunit 5
           [Antheraea pernyi]
          Length = 585

 Score = 30.8 bits (68), Expect = 9.3
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
 Frame = -1

Query: 276 GSEFLS-FVDLRMTHELLSFW*TLNMRWLVFWLILIAIRISHFLTF*LYLIPPA*TFHIV 100
           G  FL+ F    +  E++SF    N+ +LVF+   I+  ++ F TF L L      F+++
Sbjct: 356 GIPFLAGFYSKDLILEMVSF---SNLNFLVFFFYYISTGLTMFYTFRLILYTMIMDFNLM 412

Query: 99  VLLRPYDRCSF*CKYWLA-DFIYVIGMCLLSW 7
           V+   YD      K  +   F+ VI    LSW
Sbjct: 413 VIYNLYDEDFIMLKSMMVLLFMSVISGSFLSW 444

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 394,749,217
Number of Sequences: 1393205
Number of extensions: 7589505
Number of successful extensions: 13507
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13504
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15652649358
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MR072a04_f BP081503 1 364 2 GNf090h04 BP074042 61 509 3 GNf016e03 BP068534 61 489

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