Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003051A_C01 KMC003051A_c01
(459 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM61117.1| short chain alcohol dehydrogenase-like [Arabidops... 65 3e-10
ref|NP_196225.1| short chain alcohol dehydrogenase-like; protein... 65 3e-10
gb|AAO42159.1| putative tropinone reductase [Arabidopsis thaliana] 64 6e-10
ref|NP_180489.1| putative tropinone reductase; protein id: At2g2... 64 6e-10
dbj|BAC65128.1| short chain alcohol dehydrogenase-like protein [... 62 4e-09
>gb|AAM61117.1| short chain alcohol dehydrogenase-like [Arabidopsis thaliana]
Length = 264
Score = 65.5 bits (158), Expect = 3e-10
Identities = 34/81 (41%), Positives = 45/81 (54%), Gaps = 2/81 (2%)
Frame = -3
Query: 457 CEWAKDIIRSNCVVPWAPRPPLVEHLFPNPKFVDDIMSRTPLKRIAEPRRSVIVGGFPLF 278
CEWA D IR+NCV PW + LVE L +FV+ ++SRTPL R+ EP V F
Sbjct: 177 CEWASDNIRTNCVAPWYIKTSLVETLLEKKEFVEAVVSRTPLGRVGEPEE---VSSLVAF 233
Query: 277 ACCVLHHWT--RLLCVDGGLT 221
C + +++ VDGG T
Sbjct: 234 LCLPASSYITGQVISVDGGFT 254
>ref|NP_196225.1| short chain alcohol dehydrogenase-like; protein id: At5g06060.1,
supported by cDNA: 111427. [Arabidopsis thaliana]
gi|8978342|dbj|BAA98195.1| short chain alcohol
dehydrogenase-like [Arabidopsis thaliana]
gi|27754526|gb|AAO22710.1| putative short chain alcohol
dehydrogenase [Arabidopsis thaliana]
gi|28394081|gb|AAO42448.1| putative short chain alcohol
dehydrogenase [Arabidopsis thaliana]
Length = 264
Score = 65.5 bits (158), Expect = 3e-10
Identities = 34/81 (41%), Positives = 45/81 (54%), Gaps = 2/81 (2%)
Frame = -3
Query: 457 CEWAKDIIRSNCVVPWAPRPPLVEHLFPNPKFVDDIMSRTPLKRIAEPRRSVIVGGFPLF 278
CEWA D IR+NCV PW + LVE L +FV+ ++SRTPL R+ EP V F
Sbjct: 177 CEWASDNIRTNCVAPWYIKTSLVETLLEKKEFVEAVVSRTPLGRVGEPEE---VSSLVAF 233
Query: 277 ACCVLHHWT--RLLCVDGGLT 221
C + +++ VDGG T
Sbjct: 234 LCLPASSYITGQVISVDGGFT 254
>gb|AAO42159.1| putative tropinone reductase [Arabidopsis thaliana]
Length = 312
Score = 64.3 bits (155), Expect = 6e-10
Identities = 32/81 (39%), Positives = 47/81 (57%), Gaps = 2/81 (2%)
Frame = -3
Query: 457 CEWAKDIIRSNCVVPWAPRPPLVEHLFPNPKFVDDIMSRTPLKRIAEPRRSVIVGGFPLF 278
CEWAKD IR N V PW + +VE + N ++++++ S TPL R+ EPR V F
Sbjct: 226 CEWAKDNIRINAVAPWYIKTSMVEQVLSNKEYLEEVYSVTPLGRLGEPRE---VSSAVAF 282
Query: 277 ACCVLHHWT--RLLCVDGGLT 221
C + ++LCVDGG++
Sbjct: 283 LCLPASSYITGQILCVDGGMS 303
>ref|NP_180489.1| putative tropinone reductase; protein id: At2g29260.1 [Arabidopsis
thaliana] gi|25283419|pir||D84694 probable tropinone
reductase [imported] - Arabidopsis thaliana
gi|3980406|gb|AAC95209.1| putative tropinone reductase
[Arabidopsis thaliana]
Length = 322
Score = 64.3 bits (155), Expect = 6e-10
Identities = 32/81 (39%), Positives = 47/81 (57%), Gaps = 2/81 (2%)
Frame = -3
Query: 457 CEWAKDIIRSNCVVPWAPRPPLVEHLFPNPKFVDDIMSRTPLKRIAEPRRSVIVGGFPLF 278
CEWAKD IR N V PW + +VE + N ++++++ S TPL R+ EPR V F
Sbjct: 236 CEWAKDNIRINAVAPWYIKTSMVEQVLSNKEYLEEVYSVTPLGRLGEPRE---VSSAVAF 292
Query: 277 ACCVLHHWT--RLLCVDGGLT 221
C + ++LCVDGG++
Sbjct: 293 LCLPASSYITGQILCVDGGMS 313
>dbj|BAC65128.1| short chain alcohol dehydrogenase-like protein [Daucus carota]
Length = 277
Score = 61.6 bits (148), Expect = 4e-09
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = -3
Query: 457 CEWAKDIIRSNCVVPWAPRPPLVEHLFPNPKFVDDIMSRTPLKRIAEPRRSVIVGGFPLF 278
CEWAKD IR+NCV P + P VE LF F+D ++SRTPL+R P + V +
Sbjct: 192 CEWAKDNIRTNCVAPGYIKTPPVEKLFERKNFLDRLVSRTPLRR---PGETEEVSSLVAY 248
Query: 277 ACCVLHHWT--RLLCVDGGLT 221
C + +++ +DGGLT
Sbjct: 249 LCMPAASYITGQIIAIDGGLT 269
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 414,631,903
Number of Sequences: 1393205
Number of extensions: 8985293
Number of successful extensions: 21909
Number of sequences better than 10.0: 224
Number of HSP's better than 10.0 without gapping: 21120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21839
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 11706011480
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
