Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003044A_C02 KMC003044A_c02
(1244 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_201231.1| phi-1-like protein; protein id: At5g64260.1, su... 421 e-116
ref|NP_196506.1| putative protein; protein id: At5g09440.1, supp... 353 2e-96
dbj|BAA33810.1| phi-1 [Nicotiana tabacum] 348 1e-94
gb|AAM64992.1| putative phi-1-like phosphate-induced protein [Ar... 345 1e-93
ref|NP_192634.1| putative phi-1-like phosphate-induced protein; ... 344 1e-93
>ref|NP_201231.1| phi-1-like protein; protein id: At5g64260.1, supported by cDNA:
37357., supported by cDNA: gi_11908087, supported by
cDNA: gi_12642895, supported by cDNA: gi_14190476,
supported by cDNA: gi_16323269 [Arabidopsis thaliana]
gi|11908088|gb|AAG41473.1|AF326891_1 putative phi-1
protein [Arabidopsis thaliana]
gi|12642896|gb|AAK00390.1|AF339708_1 putative phi-1
protein [Arabidopsis thaliana]
gi|14190477|gb|AAK55719.1|AF380638_1 AT5g64260/MSJ1_10
[Arabidopsis thaliana] gi|16323270|gb|AAL15369.1|
AT5g64260/MSJ1_10 [Arabidopsis thaliana]
gi|21593241|gb|AAM65190.1| phi-1-like protein
[Arabidopsis thaliana]
Length = 305
Score = 421 bits (1082), Expect = e-116
Identities = 212/313 (67%), Positives = 242/313 (76%), Gaps = 8/313 (2%)
Frame = -2
Query: 1204 MASNYTLATLLSAVLLLQFLPELTVGALVQEQPLVLKYHNGQLLKGQITVNLIWYGSFSP 1025
MASNY A L+ L + ALV+EQPLV+KYHNG LLKG ITVNL+WYG F+P
Sbjct: 1 MASNYRFAIFLT---LFFATAGFSAAALVEEQPLVMKYHNGVLLKGNITVNLVWYGKFTP 57
Query: 1024 IQRSIIVDFVNSLST----TGAALPSAAAWWKTTEKYKTGPSALVVGKQFLHPAYTLGKS 857
IQRS+IVDF++SL++ + AA+PS A+WWKTTEKYK G S LVVGKQ L Y LGKS
Sbjct: 58 IQRSVIVDFIHSLNSKDVASSAAVPSVASWWKTTEKYKGGSSTLVVGKQLLLENYPLGKS 117
Query: 856 LKGRDLLALASKFKSSNSNAALSSITVVLTAKDVAGDGFCMSRCGSHGSVRSGAVRTA-- 683
LK L AL++K N L SITVVLTAKDV + FCMSRCG+HGS S R A
Sbjct: 118 LKNPYLRALSTKL-----NGGLRSITVVLTAKDVTVERFCMSRCGTHGSSGSNPRRAANG 172
Query: 682 --YVWVGNSETQCPGQCAWPFHQPMYGPQTPPLVAPNGDVGVDGMVINLATLLAGTVTNP 509
YVWVGNSETQCPG CAWPFHQP+YGPQTPPLVAPNGDVGVDGM+INLATLLA TVTNP
Sbjct: 173 AAYVWVGNSETQCPGYCAWPFHQPIYGPQTPPLVAPNGDVGVDGMIINLATLLANTVTNP 232
Query: 508 FNNGYFQGPATAPLEAVTACTGVFGSGAYPGYPGQVLVDGVSGASFNAHGANGRKFLLPA 329
FNNGY+QGP TAPLEAV+AC G+FGSG+YPGY G+VLVD +G+S+NA G GRK+LLPA
Sbjct: 233 FNNGYYQGPPTAPLEAVSACPGIFGSGSYPGYAGRVLVDKTTGSSYNARGLAGRKYLLPA 292
Query: 328 MWDPQTSVCKPLV 290
MWDPQ+S CK LV
Sbjct: 293 MWDPQSSTCKTLV 305
>ref|NP_196506.1| putative protein; protein id: At5g09440.1, supported by cDNA: 38576.,
supported by cDNA: gi_17473690, supported by cDNA:
gi_20148462 [Arabidopsis thaliana]
gi|9955531|emb|CAC05470.1| putative protein [Arabidopsis
thaliana] gi|17473691|gb|AAL38302.1| putative protein
[Arabidopsis thaliana] gi|20148463|gb|AAM10122.1|
putative protein [Arabidopsis thaliana]
gi|21593400|gb|AAM65367.1| phi-1-like protein
[Arabidopsis thaliana]
Length = 278
Score = 353 bits (907), Expect = 2e-96
Identities = 191/306 (62%), Positives = 218/306 (70%), Gaps = 1/306 (0%)
Frame = -2
Query: 1204 MASNYTLATLLSAVLLLQFLPELTVGALVQEQPLVLKYHNGQLLKGQITVNLIWYGSFSP 1025
MA NY A LL +LL T AL +P V + L G IT+NLIWYG F+P
Sbjct: 1 MAYNYRFAILL---VLLSATVGFTAAAL---KPPV------RTLNGNITLNLIWYGKFTP 48
Query: 1024 IQRSIIVDFVNSLSTTGAAL-PSAAAWWKTTEKYKTGPSALVVGKQFLHPAYTLGKSLKG 848
IQRSIIVDF+ S+S+ AA PS A+WWKTTEKYKTG S LVVGKQ L Y LGKSLK
Sbjct: 49 IQRSIIVDFIRSISSVTAAKGPSVASWWKTTEKYKTGVSTLVVGKQLLLENYPLGKSLKS 108
Query: 847 RDLLALASKFKSSNSNAALSSITVVLTAKDVAGDGFCMSRCGSHGSVRSGAVRTAYVWVG 668
L AL+SK + + SITVVLTAKDV +G CM+RCG+HGS S AYVWVG
Sbjct: 109 PYLRALSSKLNAGGAR----SITVVLTAKDVTVEGLCMNRCGTHGSKSSSVNSGAYVWVG 164
Query: 667 NSETQCPGQCAWPFHQPMYGPQTPPLVAPNGDVGVDGMVINLATLLAGTVTNPFNNGYFQ 488
NSETQCPG CAWPFHQP+YGPQ+PPLVAPNGDVGVDGM+IN+ATLL TVTNP
Sbjct: 165 NSETQCPGYCAWPFHQPIYGPQSPPLVAPNGDVGVDGMIINIATLLVNTVTNP------- 217
Query: 487 GPATAPLEAVTACTGVFGSGAYPGYPGQVLVDGVSGASFNAHGANGRKFLLPAMWDPQTS 308
+P EAV+ACTG+FGSGAYPGY G+VLVD SGAS+NA G GRK+LLPA+WDPQTS
Sbjct: 218 ----SP-EAVSACTGIFGSGAYPGYAGRVLVDKTSGASYNALGLAGRKYLLPALWDPQTS 272
Query: 307 VCKPLV 290
CK +V
Sbjct: 273 TCKTMV 278
>dbj|BAA33810.1| phi-1 [Nicotiana tabacum]
Length = 313
Score = 348 bits (892), Expect = 1e-94
Identities = 175/292 (59%), Positives = 211/292 (71%), Gaps = 13/292 (4%)
Frame = -2
Query: 1126 ALVQE-QPLVLKYHNGQLLKGQITVNLIWYGSFSPIQRSIIVDFVNSLS--TTGAALPSA 956
ALVQE + +L+YH G LL G+I+VNLIWYG F P QR+I+ DF+ SLS T PS
Sbjct: 28 ALVQEPENQLLQYHKGALLFGKISVNLIWYGKFKPSQRAIVSDFITSLSSSTPSKTDPSV 87
Query: 955 AAWWKTTEKY-----KTGPSALVVGKQFLHPAYTLGKSLKGRDLLALASKFKSSNSNAAL 791
A WWKTTEKY +L +GKQ L Y+LGKSL + ++ LASK + ++
Sbjct: 88 AKWWKTTEKYYHLANSKKSLSLYLGKQVLVENYSLGKSLTQKQIVQLASKGEQKDA---- 143
Query: 790 SSITVVLTAKDVAGDGFCMSRCGSHGSVRSGAVRT-----AYVWVGNSETQCPGQCAWPF 626
I +VLTA DVA DGFC++RCG+HGS + +R AY+WVGNSETQC G CAWPF
Sbjct: 144 --INIVLTASDVAVDGFCVNRCGTHGSSKGAIIRGKTYKFAYIWVGNSETQCAGYCAWPF 201
Query: 625 HQPMYGPQTPPLVAPNGDVGVDGMVINLATLLAGTVTNPFNNGYFQGPATAPLEAVTACT 446
HQP+YGPQ+PPLVAPN DVGVDGMVINLA+LLAGT TNPF NGY+QG A APLEA +AC
Sbjct: 202 HQPIYGPQSPPLVAPNNDVGVDGMVINLASLLAGTATNPFGNGYYQGEADAPLEAASACP 261
Query: 445 GVFGSGAYPGYPGQVLVDGVSGASFNAHGANGRKFLLPAMWDPQTSVCKPLV 290
GV+ GAYPGY G +LVD +GAS+NAHG NGRK+LLPA++DP TS C LV
Sbjct: 262 GVYAKGAYPGYAGDLLVDKTTGASYNAHGTNGRKYLLPALYDPSTSTCSTLV 313
>gb|AAM64992.1| putative phi-1-like phosphate-induced protein [Arabidopsis thaliana]
Length = 314
Score = 345 bits (884), Expect = 1e-93
Identities = 178/318 (55%), Positives = 217/318 (67%), Gaps = 21/318 (6%)
Frame = -2
Query: 1180 TLLSAVLLLQFLPELTVGA--LVQEQP---LVLKYHNGQLLKGQITVNLIWYGSFSPIQR 1016
+L+ + L L +++V A L ++P +LKYH G LL G+I+VNLIWYG F P QR
Sbjct: 3 SLVFKLFLFLSLLQISVSARNLASQEPNQFQLLKYHKGALLSGKISVNLIWYGKFKPSQR 62
Query: 1015 SIIVDFVNSLSTTGAAL-----PSAAAWWKTTEKY--------KTGPSALVVGKQFLHPA 875
+II DF+ SL+ T PS A WWKTTEKY + P +L +GKQ + +
Sbjct: 63 AIISDFITSLTHTSPTSKTLHQPSVATWWKTTEKYYKLATPSKNSSPLSLTLGKQIIDES 122
Query: 874 YTLGKSLKGRDLLALASKFKSSNSNAALSSITVVLTAKDVAGDGFCMSRCGSHGSVRSGA 695
+LGKSL + + LASK N+ I VVLT+ DV GF MSRCG+HG R
Sbjct: 123 CSLGKSLTDKKIQTLASKGDQRNA------INVVLTSADVTVTGFGMSRCGTHGHARGLG 176
Query: 694 VRT---AYVWVGNSETQCPGQCAWPFHQPMYGPQTPPLVAPNGDVGVDGMVINLATLLAG 524
R AY+WVGNSETQCPGQCAWPFH P+YGPQ+PPLVAPN DVG+DGMVINLA+LLAG
Sbjct: 177 KRGSKFAYIWVGNSETQCPGQCAWPFHAPVYGPQSPPLVAPNNDVGLDGMVINLASLLAG 236
Query: 523 TVTNPFNNGYFQGPATAPLEAVTACTGVFGSGAYPGYPGQVLVDGVSGASFNAHGANGRK 344
T TNPF NGY+QGP APLEA +AC GV+G GAYPGY G +LVD +G SFNA+GANGRK
Sbjct: 237 TATNPFGNGYYQGPQNAPLEAASACPGVYGKGAYPGYAGDLLVDTTTGGSFNAYGANGRK 296
Query: 343 FLLPAMWDPQTSVCKPLV 290
FLLPA++DP TS C +V
Sbjct: 297 FLLPALYDPTTSACSTMV 314
>ref|NP_192634.1| putative phi-1-like phosphate-induced protein; protein id:
At4g08950.1, supported by cDNA: 3552., supported by cDNA:
gi_15450811, supported by cDNA: gi_20259893, supported by
cDNA: gi_20271141 [Arabidopsis thaliana]
gi|25371901|pir||C85090 probable phi-1-like
phosphate-induced protein [imported] - Arabidopsis
thaliana gi|4325369|gb|AAD17365.1| T3H13.3 gene product
[Arabidopsis thaliana] gi|7267537|emb|CAB78019.1|
putative phi-1-like phosphate-induced protein
[Arabidopsis thaliana] gi|15450812|gb|AAK96677.1| Unknown
protein [Arabidopsis thaliana] gi|20259894|gb|AAM13294.1|
unknown protein [Arabidopsis thaliana]
gi|20271142|gb|AAM18526.1|AF496655_1 cell cycle-related
protein [Arabidopsis thaliana]
Length = 314
Score = 344 bits (883), Expect = 1e-93
Identities = 178/317 (56%), Positives = 216/317 (67%), Gaps = 21/317 (6%)
Frame = -2
Query: 1177 LLSAVLLLQFLPELTVGA--LVQEQP---LVLKYHNGQLLKGQITVNLIWYGSFSPIQRS 1013
L+ + L L +++V A L ++P +LKYH G LL G+I+VNLIWYG F P QR+
Sbjct: 4 LVFKLFLFLSLLQISVSARNLASQEPNQFQLLKYHKGALLSGKISVNLIWYGKFKPSQRA 63
Query: 1012 IIVDFVNSLSTTGAAL-----PSAAAWWKTTEKY--------KTGPSALVVGKQFLHPAY 872
II DF+ SL+ T PS A WWKTTEKY + P +L +GKQ + +
Sbjct: 64 IISDFITSLTHTSPTSKTLHQPSVATWWKTTEKYYKLATPSKNSSPLSLTLGKQIIDESC 123
Query: 871 TLGKSLKGRDLLALASKFKSSNSNAALSSITVVLTAKDVAGDGFCMSRCGSHGSVRSGAV 692
+LGKSL + + LASK N+ I VVLT+ DV GF MSRCG+HG R
Sbjct: 124 SLGKSLTDKKIQTLASKGDQRNA------INVVLTSADVTVTGFGMSRCGTHGHARGLGK 177
Query: 691 RT---AYVWVGNSETQCPGQCAWPFHQPMYGPQTPPLVAPNGDVGVDGMVINLATLLAGT 521
R AY+WVGNSETQCPGQCAWPFH P+YGPQ+PPLVAPN DVG+DGMVINLA+LLAGT
Sbjct: 178 RGSKFAYIWVGNSETQCPGQCAWPFHAPVYGPQSPPLVAPNNDVGLDGMVINLASLLAGT 237
Query: 520 VTNPFNNGYFQGPATAPLEAVTACTGVFGSGAYPGYPGQVLVDGVSGASFNAHGANGRKF 341
TNPF NGY+QGP APLEA +AC GV+G GAYPGY G +LVD +G SFNA+GANGRKF
Sbjct: 238 ATNPFGNGYYQGPQNAPLEAASACPGVYGKGAYPGYAGDLLVDTTTGGSFNAYGANGRKF 297
Query: 340 LLPAMWDPQTSVCKPLV 290
LLPA++DP TS C +V
Sbjct: 298 LLPALYDPTTSACSTMV 314
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,274,158,210
Number of Sequences: 1393205
Number of extensions: 35639376
Number of successful extensions: 253035
Number of sequences better than 10.0: 2179
Number of HSP's better than 10.0 without gapping: 131643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 210606
length of database: 448,689,247
effective HSP length: 126
effective length of database: 273,145,417
effective search space used: 78665880096
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
