Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003043A_C01 KMC003043A_c01
(1015 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC07424.1| cinnamoyl-CoA reductase [Populus balsamifera sub... 291 1e-77
emb|CAA12276.1| cinnamoyl CoA reductase [Populus balsamifera sub... 288 9e-77
gb|AAF43141.1|AF217958_1 cinnamoyl CoA reductase; CCR [Populus t... 283 3e-75
gb|AAN71761.1| cinnamoyl CoA reductase [Solanum tuberosum] 281 1e-74
pir||T10733 cinnamoyl-CoA reductase (EC 1.2.1.44) CCR - cider tr... 281 1e-74
>emb|CAC07424.1| cinnamoyl-CoA reductase [Populus balsamifera subsp. trichocarpa]
Length = 338
Score = 291 bits (745), Expect = 1e-77
Identities = 139/168 (82%), Positives = 149/168 (87%)
Frame = -1
Query: 505 GETICVTGAGGFIASWMVKLLLQKGYTVRGTVRNPDDPKNGHLRELEGASDRLTLIKVDL 326
G+TICVTGAGGFIASWMVKLLL KGYTVRGT RNP DPKN HLRELEGA +RLTL K DL
Sbjct: 12 GQTICVTGAGGFIASWMVKLLLDKGYTVRGTARNPADPKNSHLRELEGAEERLTLCKADL 71
Query: 325 LELNSVRAAVHGSHGVFHTASPVTDNPEEMVEPAVNGAKNVIIAAAEAKVRRVVFTSSIG 146
L+ S++ A+ G GVFHTASPVTD+PEEMVEPAVNG KNVIIAAAEAKVRRVVFTSSIG
Sbjct: 72 LDYESLKEAIQGCDGVFHTASPVTDDPEEMVEPAVNGTKNVIIAAAEAKVRRVVFTSSIG 131
Query: 145 AVYMDPKRSVDSVVDESCWSDLEFCKDTKNWYCYGKAVAEQAAWDTAK 2
AVYMDP + D V+DESCWSDLEFCK+TKNWYCYGKAVAEQAAWD AK
Sbjct: 132 AVYMDPNKGPDVVIDESCWSDLEFCKNTKNWYCYGKAVAEQAAWDMAK 179
>emb|CAA12276.1| cinnamoyl CoA reductase [Populus balsamifera subsp. trichocarpa]
Length = 338
Score = 288 bits (737), Expect = 9e-77
Identities = 137/168 (81%), Positives = 147/168 (86%)
Frame = -1
Query: 505 GETICVTGAGGFIASWMVKLLLQKGYTVRGTVRNPDDPKNGHLRELEGASDRLTLIKVDL 326
G+TICVTG GGFIASWMVKLLL KGYTVRGT RNP DPKN HLRELEGA +RLTL K DL
Sbjct: 12 GQTICVTGGGGFIASWMVKLLLDKGYTVRGTARNPADPKNSHLRELEGAEERLTLCKADL 71
Query: 325 LELNSVRAAVHGSHGVFHTASPVTDNPEEMVEPAVNGAKNVIIAAAEAKVRRVVFTSSIG 146
L+ S++ + G GVFHTASPVTD+PEEMVEPAVNG KNVIIAAAEAKVRRVVFTSSIG
Sbjct: 72 LDYESLKEGIQGCDGVFHTASPVTDDPEEMVEPAVNGTKNVIIAAAEAKVRRVVFTSSIG 131
Query: 145 AVYMDPKRSVDSVVDESCWSDLEFCKDTKNWYCYGKAVAEQAAWDTAK 2
AVYMDP + D V+DESCWSDLEFCK+TKNWYCYGKAVAEQAAWD AK
Sbjct: 132 AVYMDPNKGPDVVIDESCWSDLEFCKNTKNWYCYGKAVAEQAAWDMAK 179
>gb|AAF43141.1|AF217958_1 cinnamoyl CoA reductase; CCR [Populus tremuloides]
Length = 337
Score = 283 bits (724), Expect = 3e-75
Identities = 137/168 (81%), Positives = 147/168 (86%)
Frame = -1
Query: 505 GETICVTGAGGFIASWMVKLLLQKGYTVRGTVRNPDDPKNGHLRELEGASDRLTLIKVDL 326
G+T CVTGAGGFIASWMVKLLL KGYTVRGT RNP DP N HLRELEGA +RLTL K DL
Sbjct: 12 GQT-CVTGAGGFIASWMVKLLLDKGYTVRGTARNPADPNNSHLRELEGAQERLTLCKADL 70
Query: 325 LELNSVRAAVHGSHGVFHTASPVTDNPEEMVEPAVNGAKNVIIAAAEAKVRRVVFTSSIG 146
L+ S++ A+ G GVFHTASPVTD+PEEMVEPAVNG KNVIIAAAEAKVRRVVFTSSIG
Sbjct: 71 LDYESLKEAIQGCDGVFHTASPVTDDPEEMVEPAVNGTKNVIIAAAEAKVRRVVFTSSIG 130
Query: 145 AVYMDPKRSVDSVVDESCWSDLEFCKDTKNWYCYGKAVAEQAAWDTAK 2
AVYMDP + D V+DESCWSDLEFCK+TKNWYCYGKAVAEQAAWD AK
Sbjct: 131 AVYMDPNKGPDVVIDESCWSDLEFCKNTKNWYCYGKAVAEQAAWDMAK 178
>gb|AAN71761.1| cinnamoyl CoA reductase [Solanum tuberosum]
Length = 332
Score = 281 bits (718), Expect = 1e-74
Identities = 130/173 (75%), Positives = 151/173 (87%)
Frame = -1
Query: 520 MPAAAGETICVTGAGGFIASWMVKLLLQKGYTVRGTVRNPDDPKNGHLRELEGASDRLTL 341
MP+ +G+ +CVTGAGGFIASW+VKLLL+KGYTVRGTVRNPDDPKNGHL+ELEGA +RL L
Sbjct: 1 MPSESGKVVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPDDPKNGHLKELEGAKERLIL 60
Query: 340 IKVDLLELNSVRAAVHGSHGVFHTASPVTDNPEEMVEPAVNGAKNVIIAAAEAKVRRVVF 161
++ DLL+ S+R A++G GVFHTASPVTD+PE+MVEPAV G KNVI AAAEAKV RVVF
Sbjct: 61 LRADLLDYQSLREAIYGCDGVFHTASPVTDDPEQMVEPAVIGTKNVITAAAEAKVGRVVF 120
Query: 160 TSSIGAVYMDPKRSVDSVVDESCWSDLEFCKDTKNWYCYGKAVAEQAAWDTAK 2
TSSIG VYMDP R+ D VVDE+CWSDL FCK+TKNWYCYGK VAE+ AWD A+
Sbjct: 121 TSSIGTVYMDPNRAPDKVVDETCWSDLGFCKNTKNWYCYGKTVAEKTAWDEAR 173
>pir||T10733 cinnamoyl-CoA reductase (EC 1.2.1.44) CCR - cider tree
gi|2058311|emb|CAA56103.1| cinnamoyl-CoA reductase
[Eucalyptus gunnii]
Length = 336
Score = 281 bits (718), Expect = 1e-74
Identities = 136/175 (77%), Positives = 152/175 (86%)
Frame = -1
Query: 526 DNMPAAAGETICVTGAGGFIASWMVKLLLQKGYTVRGTVRNPDDPKNGHLRELEGASDRL 347
D +P + G+T+CVTGAGGFIASW+VKLLL++GYTVRGTVRNPDDPKNGHLRELEGAS+RL
Sbjct: 4 DALPGS-GQTVCVTGAGGFIASWIVKLLLERGYTVRGTVRNPDDPKNGHLRELEGASERL 62
Query: 346 TLIKVDLLELNSVRAAVHGSHGVFHTASPVTDNPEEMVEPAVNGAKNVIIAAAEAKVRRV 167
TL K DL++ S+ A+ G GV HTASPVTD+PE+MVEPAV G KNVI+AAAEAKVRRV
Sbjct: 63 TLYKGDLMDYGSLEEAIKGCDGVVHTASPVTDDPEQMVEPAVIGTKNVIVAAAEAKVRRV 122
Query: 166 VFTSSIGAVYMDPKRSVDSVVDESCWSDLEFCKDTKNWYCYGKAVAEQAAWDTAK 2
VFTSSIGAV MDP R D VVDESCWSDLEFCK TKNWYCYGKAVAE+AAW AK
Sbjct: 123 VFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKSTKNWYCYGKAVAEKAAWPEAK 177
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 903,309,322
Number of Sequences: 1393205
Number of extensions: 20685480
Number of successful extensions: 69133
Number of sequences better than 10.0: 1630
Number of HSP's better than 10.0 without gapping: 63527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68168
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 58773479151
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
