>KMC003040A_C01 KMC003040A_c01
gccccctcgagtttttttctttttttttagCAGAAGGGAAAACAATTCACATTCTCTGAG
AAAATGTTTGAATACAATGAGTACATACCTTCTACTACACTGGAGAAATTGACAAAACTA
CTTAGTATTGGGGTTTGTTATTCAATAAATTTCAAGACTCTTTGACTCTGGAGCTTAATT
TACCTAATTTAGTTTTCTTATAAACTTTACTATAGCACACAACCATTAACGGGGGGCAAC
TTGAGAAGTAGATTTATAAGGCCCTAAAGTTGTAATCACTTTAAACCAACCATTTGGAGA
ATCGACCATCATCAGATTCTTATAACTCACTGAAATGACTCGAAAGCAATTTGAAATTGG
CTGTTTATAGACGGTGATGCGCTTGGTTCATAGCTTAGGTCCTCTATGGTGGTAGTGGGA
TATCAGCTAAATCTTCTCTATAAGGAACTTGGCTCAGCTCTAATTGACCATTGTTCATAA
ACCCCTTTTCCACATGAGTTTGCATCATTGGGTCATTCTTGGTCTCGATATAT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC003040A_C01 KMC003040A_c01
         (533 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_703568.1| hypothetical protein [Plasmodium falciparum 3D7...    34  0.96

>ref|NP_703568.1| hypothetical protein [Plasmodium falciparum 3D7]
            gi|23504710|emb|CAD51588.1| hypothetical protein
            [Plasmodium falciparum 3D7]
          Length = 9341

 Score = 34.3 bits (77), Expect = 0.96
 Identities = 28/89 (31%), Positives = 41/89 (45%), Gaps = 5/89 (5%)
 Frame = +1

Query: 34   KGKQFTFSEKMFEYNEYIPSTTLEKLTKLLSIGVCYSINFKTL*LW-----SLIYLI*FS 198
            +   +TF +K  EYN Y+      K T LLSIG C+ +  K + L+     SL YL    
Sbjct: 1431 RNSYYTFLKKYMEYNNYMHKV---KNTSLLSIGFCFQL--KNIFLFHDKEDSLFYLHSKY 1485

Query: 199  YKLYYSTQPLTGGNLRSRFIRP*SCNHFK 285
             KL +   P    N  +  +   +CN F+
Sbjct: 1486 IKLEHLFNPCFNNNKHNNSVV--ACNRFE 1512

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 425,455,943
Number of Sequences: 1393205
Number of extensions: 8042586
Number of successful extensions: 13255
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13253
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17885181664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 GNf014f05 BP068396 1 534 2 MR004e01_f BP076239 31 420

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