Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003039A_C01 KMC003039A_c01
(605 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_191130.1| glucuronosyl transferase - like protein; protei... 57 2e-07
ref|NP_191129.1| glucuronosyl transferase - like protein; protei... 49 4e-05
gb|AAM65418.1| glucuronosyl transferase-like protein [Arabidopsi... 48 1e-04
dbj|BAC16076.1| contains ESTs AU095171(E60450),AU030928(E60450)~... 46 3e-04
dbj|BAC16077.1| glucuronosyl transferase-like protein [Oryza sat... 45 7e-04
>ref|NP_191130.1| glucuronosyl transferase - like protein; protein id: At3g55710.1
[Arabidopsis thaliana] gi|11258162|pir||T47710
glucuronosyl transferase-like protein - Arabidopsis
thaliana gi|7263559|emb|CAB81596.1| glucuronosyl
transferase-like protein [Arabidopsis thaliana]
Length = 464
Score = 56.6 bits (135), Expect = 2e-07
Identities = 32/59 (54%), Positives = 43/59 (72%)
Frame = -1
Query: 605 RGEIEKTISLLMLGDEAYEIRGNILKLKEKANVCLSEGGSSYCFLDRLVSEILSLESSA 429
R EIEK ++ +M+ + A + L+LKEKANVCLSE GSS +LD+LVS +LS +SSA
Sbjct: 404 RTEIEKVVTSVMMENGA-GLTEMCLELKEKANVCLSEDGSSSKYLDKLVSHVLSFDSSA 461
>ref|NP_191129.1| glucuronosyl transferase - like protein; protein id: At3g55700.1,
supported by cDNA: 39040. [Arabidopsis thaliana]
gi|11258160|pir||T47709 glucuronosyl transferase-like
protein - Arabidopsis thaliana
gi|7263558|emb|CAB81595.1| glucuronosyl transferase-like
protein [Arabidopsis thaliana]
Length = 460
Score = 49.3 bits (116), Expect = 4e-05
Identities = 27/57 (47%), Positives = 40/57 (69%)
Frame = -1
Query: 599 EIEKTISLLMLGDEAYEIRGNILKLKEKANVCLSEGGSSYCFLDRLVSEILSLESSA 429
EIEK + +M+ ++ +R LKLKE+A+ CLS+ GSS +LD+LVS +LS +S A
Sbjct: 402 EIEKVLRSVMM-EKGDGLRERSLKLKERADFCLSKDGSSSKYLDKLVSHVLSFDSYA 457
>gb|AAM65418.1| glucuronosyl transferase-like protein [Arabidopsis thaliana]
Length = 450
Score = 47.8 bits (112), Expect = 1e-04
Identities = 26/57 (45%), Positives = 39/57 (67%)
Frame = -1
Query: 599 EIEKTISLLMLGDEAYEIRGNILKLKEKANVCLSEGGSSYCFLDRLVSEILSLESSA 429
EIEK + +M+ ++ +R LKLKE+A+ CLS+ GSS +LD+ VS +LS +S A
Sbjct: 392 EIEKVLRSVMM-EKGDGLRERSLKLKERADFCLSKDGSSSKYLDKFVSHVLSFDSYA 447
>dbj|BAC16076.1| contains ESTs AU095171(E60450),AU030928(E60450)~glucuronosyl
transferase-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 428
Score = 46.2 bits (108), Expect = 3e-04
Identities = 27/53 (50%), Positives = 33/53 (61%)
Frame = -1
Query: 599 EIEKTISLLMLGDEAYEIRGNILKLKEKANVCLSEGGSSYCFLDRLVSEILSL 441
+IEK I LM +E E+R +LK K CL +GGSS +DRLVS ILSL
Sbjct: 376 KIEKAIMKLMGKNEGAEMRERANELKNKVARCLEDGGSSQIAIDRLVSYILSL 428
>dbj|BAC16077.1| glucuronosyl transferase-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 463
Score = 45.1 bits (105), Expect = 7e-04
Identities = 23/55 (41%), Positives = 35/55 (62%)
Frame = -1
Query: 605 RGEIEKTISLLMLGDEAYEIRGNILKLKEKANVCLSEGGSSYCFLDRLVSEILSL 441
R +IE+ I LM G+E E++ +LK+K +CL GGS+ +D+LV +LSL
Sbjct: 409 RWKIEEAIRRLMEGEEGAEVKQRADELKKKILICLKNGGSTQQAIDKLVDHMLSL 463
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 496,808,765
Number of Sequences: 1393205
Number of extensions: 10588655
Number of successful extensions: 30516
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 29521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30484
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23997478008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
