>KMC003031A_C01 KMC003031A_c01
gtgttggtcAGGAAGCAGGTTCTATTTACTGTACCAACAGGAAAATACAACTGATACACA
TAGCAGAAAGTACAAAGCCTCTGAACTTGTGTTGGTTGAACTTTACTTGTGTTTGTGAAT
ACAGAGCCTCTAAAGTAAATGGCTTCATGATGAGTTCTCTAATTTTGGAAAAATGGAATC
AAGAAAAGCATTGTACTTCGGGTCCAGCATCCAGAGATCAGCAATCTGGAAATGCGATGA
GGTTTGCCGGTGGACTTCCTCTGCCAGCCAGACCATGGCTTCAGCTTGGCACGGGTGAAT
GATATCGTCTAATGGCGTAAGCTCATCCGCGCTGCCAATTCTCCGCTGGTCCCACTGCTT
AAGGAGAACATGGGTGAGGTAATGAAGAGGCTGCCCGTATAACTGCTTAAGGGATCTTCC
TAACCCCATCCATGAGGTAAATGGGATGACAGAGCCTCGATGGCTTGGGATTGGAATCTG
CTTCATGTAATCCTGATACATTCCTGCCCTTTTGATGAGCACATCATGAGACATGATAT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC003031A_C01 KMC003031A_c01
         (539 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB01243.1| gene_id:MWI23.5~unknown protein [Arabidopsis tha...   170  1e-41
ref|NP_188907.1| unknown protein; protein id: At3g22680.1 [Arabi...   170  1e-41
emb|CAD33752.1| FasG-like protein [Escherichia coli]                   35  0.76
ref|NP_507588.1| Putative N-myristoylated cytoplasmic protein, w...    32  6.4
ref|NP_006964.1|ND5_10021 NADH dehydrogenase subunit 5 [Caenorha...    31  8.4

>dbj|BAB01243.1| gene_id:MWI23.5~unknown protein [Arabidopsis thaliana]
          Length = 163

 Score =  170 bits (430), Expect = 1e-41
 Identities = 76/119 (63%), Positives = 96/119 (79%)
 Frame = -3

Query: 519 LIKRAGMYQDYMKQIPIPSHRGSVIPFTSWMGLGRSLKQLYGQPLHYLTHVLLKQWDQRR 340
           L++RA MYQDYMKQ+PIP++RGS+IPFTSW+GL  S+KQLYGQPLHYLT+VLL++WDQ R
Sbjct: 44  LLRRAEMYQDYMKQVPIPTNRGSLIPFTSWVGLSISMKQLYGQPLHYLTNVLLQRWDQSR 103

Query: 339 IGSADELTPLDDIIHPCQAEAMVWLAEEVHRQTSSHFQIADLWMLDPKYNAFLDSIFPK 163
            G+  E   LD IIHP +AEA +WL EE+HR T SH  +A LW  DP Y++F+D IFP+
Sbjct: 104 FGTDSEEQRLDSIIHPTKAEATIWLVEEIHRLTPSHLHMALLWRSDPMYHSFIDPIFPE 162

>ref|NP_188907.1| unknown protein; protein id: At3g22680.1 [Arabidopsis thaliana]
          Length = 157

 Score =  170 bits (430), Expect = 1e-41
 Identities = 76/119 (63%), Positives = 96/119 (79%)
 Frame = -3

Query: 519 LIKRAGMYQDYMKQIPIPSHRGSVIPFTSWMGLGRSLKQLYGQPLHYLTHVLLKQWDQRR 340
           L++RA MYQDYMKQ+PIP++RGS+IPFTSW+GL  S+KQLYGQPLHYLT+VLL++WDQ R
Sbjct: 38  LLRRAEMYQDYMKQVPIPTNRGSLIPFTSWVGLSISMKQLYGQPLHYLTNVLLQRWDQSR 97

Query: 339 IGSADELTPLDDIIHPCQAEAMVWLAEEVHRQTSSHFQIADLWMLDPKYNAFLDSIFPK 163
            G+  E   LD IIHP +AEA +WL EE+HR T SH  +A LW  DP Y++F+D IFP+
Sbjct: 98  FGTDSEEQRLDSIIHPTKAEATIWLVEEIHRLTPSHLHMALLWRSDPMYHSFIDPIFPE 156

>emb|CAD33752.1| FasG-like protein [Escherichia coli]
          Length = 421

 Score = 34.7 bits (78), Expect = 0.76
 Identities = 24/84 (28%), Positives = 33/84 (38%), Gaps = 15/84 (17%)
 Frame = +2

Query: 146 HDEFSNFGKMESRKALYF---------------GSSIQRSAIWKCDEVCRWTSSASQTMA 280
           H EF   G ++S  A Y+               G  +  SA WK     RW  +  + M 
Sbjct: 99  HTEFRVNGGLQSNPAAYWNGWMRMEPKEVNIGDGEKLIFSAYWKGSPSIRWEETNRRNMK 158

Query: 281 SAWHG*MISSNGVSSSALPILRWS 352
           S +H   I    + SSA  I +WS
Sbjct: 159 SIFHQYTIGVASIGSSAGSITKWS 182

>ref|NP_507588.1| Putative N-myristoylated cytoplasmic protein, with 2 coiled coil-4
           domains, nematode specific (63.2 kD) [Caenorhabditis
           elegans] gi|7494956|pir||T18761 hypothetical protein
           B0462.1 - Caenorhabditis elegans
           gi|3873841|emb|CAB03810.1| Hypothetical protein B0462.1
           [Caenorhabditis elegans]
          Length = 548

 Score = 31.6 bits (70), Expect = 6.4
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
 Frame = +3

Query: 144 FMMSSLILEKWNQEKHCTSGP--ASRDQQS--GNAMRFAGGLPLPARPWLQLGTGE 299
           F  SS IL+ W Q K+C + P  A+RD Q   G    F G + +  RPW+++   E
Sbjct: 442 FEPSSQILQTWIQ-KNCNTSPFDAARDIQLILGIHCDFVGMVHMKRRPWVEIANSE 496

>ref|NP_006964.1|ND5_10021 NADH dehydrogenase subunit 5 [Caenorhabditis elegans]
           gi|1171822|sp|P24896|NU5M_CAEEL NADH-UBIQUINONE
           OXIDOREDUCTASE CHAIN 5 gi|102566|pir||S26037 NADH2
           dehydrogenase (ubiquinone) (EC 1.6.5.3) chain 5 -
           Caenorhabditis elegans mitochondrion
           gi|515886|emb|CAA38162.1| ND5 protein (AA 1 - 527)
           [Caenorhabditis elegans]
          Length = 527

 Score = 31.2 bits (69), Expect = 8.4
 Identities = 22/80 (27%), Positives = 38/80 (47%)
 Frame = -1

Query: 410 LSSYTGSLFITSPMFSLSSGTSGELAARMSLRH*TISFTRAKLKPWSGWQRKSTGKPHRI 231
           LS ++G  F++  MFS          + MSL     +FT++   P+S W  K+   P  +
Sbjct: 148 LSVFSGYYFLSFSMFS----------SYMSLLLLLTAFTKSAQFPFSSWLPKAMSAPTPV 197

Query: 230 SRLLISGCWTRSTMLFLIPF 171
           S L+ S     + ++ L+ F
Sbjct: 198 SSLVHSSTLVTAGLILLMNF 217

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 490,749,660
Number of Sequences: 1393205
Number of extensions: 10724560
Number of successful extensions: 36979
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 35918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36970
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18462123008
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 GNf013h03 BP068339 1 455 2 MWM245a03_f AV768471 8 539

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