>KMC003025A_C01 KMC003025A_c01
gcaaatattaaaaaaatgtatattcagTAGGCAAAACAATATTTGAATATCACCGATAAG
GATCAATACACTTTTTCAGTTAACCTGGTACCATCCATTATACAGCGCAAAAGTCTTTAT
TAAGGATCATTACATTTTTCTATTATACAACACTGGCTAAGTGTCAACCAATAGCAATAC
AAAACATAAAAAGCTAAACAAATTCTCTTTTTTTTTCAAGGGGAGGACAGGGAGGTCACA
CAACAGGTAATCACAATGATACTATACCCTAATATTCCAATCCTTTCTTGATGTTAATAG
TCAAATCCATATCCCACTATGATGTTGCTCTCTCCTTGTACCAAGCTCTGATTTTTTTGT
GTGGCTAACCTCAGTCCTGTCAAATTAAAATCTCTATGGTTTATAGCATCCAAGATCTAC
CCATTTTGAATCTCCTCTTTGTCTCTTACTTGAGAGGCTTGGTGTTGTTCCCAATTTAGA
ACATATTACTAATGAAGCCCCCTAGTTCCTTGGTCTTTGGCAGCTAGCAAGTCAGTTTGA
GATCTCACTTCATCCTTTATTGCTCCTGCGTGTTCTCTCAACATTTTAATCCT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC003025A_C01 KMC003025A_c01
         (593 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_702207.1| hypothetical protein [Plasmodium falciparum 3D7...    33  3.6

>ref|NP_702207.1| hypothetical protein [Plasmodium falciparum 3D7]
            gi|23497387|gb|AAN36931.1|AE014821_18 hypothetical
            protein [Plasmodium falciparum 3D7]
          Length = 1993

 Score = 32.7 bits (73), Expect = 3.6
 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
 Frame = +2

Query: 56   IRINTLFQLTWYH-PLYSAKVFIKDHYIFLLYNTG*VSTNSNTKHKKLNKFS-FFFKGRT 229
            I+ N   +L +YH  +   K +  + Y+++ YNT     N N K KKLN      +K + 
Sbjct: 1454 IKHNKELKLNYYHNKIKKLKKYFDEQYLYMYYNT---YNNYNKKKKKLNDIMIMLYKEKY 1510

Query: 230  GRSHNR*SQ*YYTLIFQS 283
             R H   ++ Y   +F +
Sbjct: 1511 YRLHKYITKNYKNKVFNT 1528

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 481,677,521
Number of Sequences: 1393205
Number of extensions: 9993013
Number of successful extensions: 17135
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17133
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22854740960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 SPDL002a01_f BP052081 1 488 2 GNf013f12 BP068326 26 201 3 MRL021a09_f BP084772 30 402 4 SPDL049g10_f BP055104 68 594 5 SPDL022e02_f BP053376 73 594

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