Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003021A_C01 KMC003021A_c01
(713 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T09617 isoliquiritigenin 2'-O-methyltransferase - alfalfa g... 136 3e-31
pdb|1FPQ|A Chain A, Crystal Structure Analysis Of Selenomethioni... 131 1e-29
dbj|BAA13683.1| O-methyltransferase [Glycyrrhiza echinata] 124 1e-27
gb|AAB96879.1| O-methyltransferase 1 [Arabidopsis thaliana] 115 8e-25
ref|NP_200227.1| O-methyltransferase 1; protein id: At5g54160.1,... 115 8e-25
>pir||T09617 isoliquiritigenin 2'-O-methyltransferase - alfalfa
gi|13399462|pdb|1FP1|D Chain D, Crystal Structure
Analysis Of Chalcone O-Methyltransferase
gi|1843462|gb|AAB48059.1| isoliquiritigenin
2'-O-methyltransferase [Medicago sativa]
Length = 372
Score = 136 bits (343), Expect = 3e-31
Identities = 66/106 (62%), Positives = 77/106 (72%)
Frame = -1
Query: 713 IEHVPGDMFESVPSGNAIMLKRTCHNWSDEDCVKFLRNCHKALPEHGKVIIVENIYPEVP 534
IEHV GDMF SVP G+A++LK CHNWSDE C++FL NCHKAL +GKVIIVE I PE P
Sbjct: 254 IEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEP 313
Query: 533 NSSVMSKCVSAGDNLMFLVHRSMERTENEFRSLCSNSGFSKFHLAC 396
N+S SK VS DNLMF+ ERTE ++ L SGFSKF +AC
Sbjct: 314 NTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVAC 359
>pdb|1FPQ|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Chalcone O-Methyltransferase
Length = 372
Score = 131 bits (329), Expect = 1e-29
Identities = 64/106 (60%), Positives = 74/106 (69%)
Frame = -1
Query: 713 IEHVPGDMFESVPSGNAIMLKRTCHNWSDEDCVKFLRNCHKALPEHGKVIIVENIYPEVP 534
IEHV GD F SVP G+A +LK CHNWSDE C++FL NCHKAL +GKVIIVE I PE P
Sbjct: 254 IEHVGGDXFASVPQGDAXILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEP 313
Query: 533 NSSVMSKCVSAGDNLMFLVHRSMERTENEFRSLCSNSGFSKFHLAC 396
N+S SK VS DNL F+ ERTE ++ L SGFSKF +AC
Sbjct: 314 NTSEESKLVSTLDNLXFITVGGRERTEKQYEKLSKLSGFSKFQVAC 359
>dbj|BAA13683.1| O-methyltransferase [Glycyrrhiza echinata]
Length = 367
Score = 124 bits (311), Expect = 1e-27
Identities = 57/106 (53%), Positives = 75/106 (69%)
Frame = -1
Query: 713 IEHVPGDMFESVPSGNAIMLKRTCHNWSDEDCVKFLRNCHKALPEHGKVIIVENIYPEVP 534
IE V GDMF SVP G+A++LK CHNWSDE C++FL NCHKAL +GKVI+VE I PE P
Sbjct: 249 IELVGGDMFASVPQGDAMILKAVCHNWSDEKCLEFLSNCHKALSPNGKVIVVEFILPEEP 308
Query: 533 NSSVMSKCVSAGDNLMFLVHRSMERTENEFRSLCSNSGFSKFHLAC 396
+ S+ S DN+MF+ ERT+ ++ ++C +GFSKF +AC
Sbjct: 309 EPTEESQLASTLDNIMFITVGGRERTQKQYENMCKLAGFSKFQVAC 354
>gb|AAB96879.1| O-methyltransferase 1 [Arabidopsis thaliana]
Length = 363
Score = 115 bits (287), Expect = 8e-25
Identities = 59/108 (54%), Positives = 73/108 (66%), Gaps = 2/108 (1%)
Frame = -1
Query: 713 IEHVPGDMFESVPSGNAIMLKRTCHNWSDEDCVKFLRNCHKALPEHGKVIIVENIYPEVP 534
IEHV GDMF SVP G+AI +K CH+WSDE CVKFL+NC+++LPE GKVI+ E I PE P
Sbjct: 243 IEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLPEDGKVILAECILPETP 302
Query: 533 NSSVMSKCVSAGDNLMFLVHR--SMERTENEFRSLCSNSGFSKFHLAC 396
+SS+ +K V D +M L H ERTE EF +L SGF + C
Sbjct: 303 DSSLSTKQVVHVDCIM-LAHNPGGKERTEKEFEALAKASGFKGIKVVC 349
>ref|NP_200227.1| O-methyltransferase 1; protein id: At5g54160.1, supported by cDNA:
33790., supported by cDNA: gi_17065521, supported by
cDNA: gi_20148472, supported by cDNA: gi_2781393
[Arabidopsis thaliana] gi|24212073|sp|Q9FK25|OMT1_ARATH
Quercetin 3-O-methyltransferase 1 (AtOMT1) (Flavonol
3-O-methyltransferase 1) (Caffeic acid/5-hydroxyferulic
acid O-methyltransferase) gi|10178165|dbj|BAB11578.1|
O-methyltransferase [Arabidopsis thaliana]
gi|17065522|gb|AAL32915.1| O-methyltransferase
[Arabidopsis thaliana] gi|20148473|gb|AAM10127.1|
O-methyltransferase [Arabidopsis thaliana]
gi|21592899|gb|AAM64849.1| O-methyltransferase
[Arabidopsis thaliana]
Length = 363
Score = 115 bits (287), Expect = 8e-25
Identities = 59/108 (54%), Positives = 73/108 (66%), Gaps = 2/108 (1%)
Frame = -1
Query: 713 IEHVPGDMFESVPSGNAIMLKRTCHNWSDEDCVKFLRNCHKALPEHGKVIIVENIYPEVP 534
IEHV GDMF SVP G+AI +K CH+WSDE CVKFL+NC+++LPE GKVI+ E I PE P
Sbjct: 243 IEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLPEDGKVILAECILPETP 302
Query: 533 NSSVMSKCVSAGDNLMFLVHR--SMERTENEFRSLCSNSGFSKFHLAC 396
+SS+ +K V D +M L H ERTE EF +L SGF + C
Sbjct: 303 DSSLSTKQVVHVDCIM-LAHNPGGKERTEKEFEALAKASGFKGIKVVC 349
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 590,579,111
Number of Sequences: 1393205
Number of extensions: 12359972
Number of successful extensions: 28406
Number of sequences better than 10.0: 193
Number of HSP's better than 10.0 without gapping: 27303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28316
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 32936043699
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
