Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003015A_C01 KMC003015A_c01
(1009 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q05091|PGIP_PYRCO Polygalacturonase inhibitor precursor (Poly... 345 8e-94
gb|AAB19212.1| polygalacturonase-inhibiting protein [Malus x dom... 343 2e-93
dbj|BAB83521.1| polygalacturonase-inhibitor protein [Citrus sp. ... 342 5e-93
gb|AAF79181.1| polygalacturonase inhibiting protein [Prunus maha... 341 9e-93
dbj|BAB83520.1| polygalacturonase-inhibitor protein [Citrus sp. ... 341 9e-93
>sp|Q05091|PGIP_PYRCO Polygalacturonase inhibitor precursor (Polygalacturonase-inhibiting
protein) gi|543660|pir||JQ2262 Polygalacturonase
inhibitor precursor - Pyrus communis
gi|169684|gb|AAA33865.1| polygalacturonase inhibitor
Length = 330
Score = 345 bits (884), Expect = 8e-94
Identities = 179/267 (67%), Positives = 208/267 (77%)
Frame = -3
Query: 1004 THRITSLIISSSVPETNFSGQIPPSVGDLPYLQVLEFHKLPKLTGPIQPAIAKLTNLRWL 825
T+RI SL I + SGQIP VGDLPYL+ LEFHK P LTGPIQPAIAKL L+ L
Sbjct: 69 TNRINSLTIFAG----QVSGQIPALVGDLPYLETLEFHKQPNLTGPIQPAIAKLKGLKSL 124
Query: 824 ILTWTNISGPIPDFLSELPNLQWLHLSFNNLTGPIPSSLSKLPNLIDLRLDRNRLTGPIP 645
L+WTN+SG +PDFLS+L NL +L LSFNNLTG IPSSLS+LPNL LRLDRN+LTG IP
Sbjct: 125 RLSWTNLSGSVPDFLSQLKNLTFLDLSFNNLTGAIPSSLSELPNLGALRLDRNKLTGHIP 184
Query: 644 DSFGSFKKPGIDLTLSHNQLSGPIPTSLGLIDPNRIDFSRNMLEGDASMLFGVN*TTEMI 465
SFG F DL LSHNQLSG IPTS +D ID SRN LEGDAS++FG+N TT+++
Sbjct: 185 ISFGQFIGNVPDLYLSHNQLSGNIPTSFAQMDFTSIDLSRNKLEGDASVIFGLNKTTQIV 244
Query: 464 DLSRNLLTFDMSKVELPTSLISLDLNHNQIYGSIPQELIKVDFLQAFNVSYNRLCGEIPQ 285
DLSRNLL F++SKVE PTSL SLD+NHN+IYGSIP E +++F Q NVSYNRLCG+IP
Sbjct: 245 DLSRNLLEFNLSKVEFPTSLTSLDINHNKIYGSIPVEFTQLNF-QFLNVSYNRLCGQIPV 303
Query: 284 GGRLQRFQVDTYFHNRCLCGSPLPSCK 204
GG+LQ F +YFHNRCLCG+PLPSCK
Sbjct: 304 GGKLQSFDEYSYFHNRCLCGAPLPSCK 330
>gb|AAB19212.1| polygalacturonase-inhibiting protein [Malus x domestica]
Length = 330
Score = 343 bits (880), Expect = 2e-93
Identities = 177/267 (66%), Positives = 207/267 (77%)
Frame = -3
Query: 1004 THRITSLIISSSVPETNFSGQIPPSVGDLPYLQVLEFHKLPKLTGPIQPAIAKLTNLRWL 825
T+RI SL I + SGQIP VGDLPYL+ LEFHK P LTGPIQPAIAKL L++L
Sbjct: 69 TNRINSLTIFAG----QVSGQIPALVGDLPYLETLEFHKQPNLTGPIQPAIAKLKGLKFL 124
Query: 824 ILTWTNISGPIPDFLSELPNLQWLHLSFNNLTGPIPSSLSKLPNLIDLRLDRNRLTGPIP 645
L+WTN+SG +PDFLS+L NL +L LSFNNLTG IPSSLS+LPNL L LDRN+LTG IP
Sbjct: 125 RLSWTNLSGSVPDFLSQLKNLTFLDLSFNNLTGAIPSSLSQLPNLNALHLDRNKLTGHIP 184
Query: 644 DSFGSFKKPGIDLTLSHNQLSGPIPTSLGLIDPNRIDFSRNMLEGDASMLFGVN*TTEMI 465
S G F DL LSHNQLSG IPTS +D ID SRN LEGDAS++FG+N TT+++
Sbjct: 185 KSLGQFIGNVPDLYLSHNQLSGNIPTSFAQMDFTSIDLSRNKLEGDASVIFGLNKTTQIV 244
Query: 464 DLSRNLLTFDMSKVELPTSLISLDLNHNQIYGSIPQELIKVDFLQAFNVSYNRLCGEIPQ 285
DLSRNLL F++SKVE PTSL SLD+NHN+IYGSIP E +++F Q NVSYNRLCG+IP
Sbjct: 245 DLSRNLLEFNLSKVEFPTSLTSLDINHNKIYGSIPVEFTQLNF-QFLNVSYNRLCGQIPV 303
Query: 284 GGRLQRFQVDTYFHNRCLCGSPLPSCK 204
GG+LQ F +YFHNRCLCG+PLPSCK
Sbjct: 304 GGKLQSFDEYSYFHNRCLCGAPLPSCK 330
>dbj|BAB83521.1| polygalacturonase-inhibitor protein [Citrus sp. cv. Sainumphung]
Length = 329
Score = 342 bits (877), Expect = 5e-93
Identities = 174/267 (65%), Positives = 204/267 (76%)
Frame = -3
Query: 1004 THRITSLIISSSVPETNFSGQIPPSVGDLPYLQVLEFHKLPKLTGPIQPAIAKLTNLRWL 825
T+RI SL I + + GQIPP VGDLPYL+ L FHKLP LTGPIQPAIAKL NL+ L
Sbjct: 67 TNRINSLTIFAG----DLPGQIPPEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTL 122
Query: 824 ILTWTNISGPIPDFLSELPNLQWLHLSFNNLTGPIPSSLSKLPNLIDLRLDRNRLTGPIP 645
++WTNISGP+PDF+S+L NL +L LSFNNL+G IP SLSKL L L LDRN+LTG IP
Sbjct: 123 RISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPGSLSKLQKLGALHLDRNKLTGSIP 182
Query: 644 DSFGSFKKPGIDLTLSHNQLSGPIPTSLGLIDPNRIDFSRNMLEGDASMLFGVN*TTEMI 465
+SFG+F DL LSHNQLSG IP SLG +D N ID SRN LEGDAS LFG+N TT+ I
Sbjct: 183 ESFGTFTGSIPDLYLSHNQLSGKIPASLGSMDFNTIDLSRNKLEGDASFLFGLNKTTQRI 242
Query: 464 DLSRNLLTFDMSKVELPTSLISLDLNHNQIYGSIPQELIKVDFLQAFNVSYNRLCGEIPQ 285
D+SRNLL F++SKVE P SL +LDLNHN+I+GSIP ++ ++ L NVSYNRLCG IP
Sbjct: 243 DVSRNLLEFNLSKVEFPQSLTNLDLNHNEIFGSIPAQITSLENLGFLNVSYNRLCGPIPV 302
Query: 284 GGRLQRFQVDTYFHNRCLCGSPLPSCK 204
GG+LQ F YFHNRCLCG+PL SCK
Sbjct: 303 GGKLQSFGYTEYFHNRCLCGAPLESCK 329
>gb|AAF79181.1| polygalacturonase inhibiting protein [Prunus mahaleb]
Length = 330
Score = 341 bits (875), Expect = 9e-93
Identities = 178/267 (66%), Positives = 207/267 (76%)
Frame = -3
Query: 1004 THRITSLIISSSVPETNFSGQIPPSVGDLPYLQVLEFHKLPKLTGPIQPAIAKLTNLRWL 825
T+RI SL I + S QIP VGDLPYL+ LEFHK P LTGPIQP+IAKL +L+ L
Sbjct: 69 TNRINSLTIFAG----QVSAQIPTQVGDLPYLETLEFHKQPNLTGPIQPSIAKLKSLKEL 124
Query: 824 ILTWTNISGPIPDFLSELPNLQWLHLSFNNLTGPIPSSLSKLPNLIDLRLDRNRLTGPIP 645
L+WTNISG +PDFLS+L NL +L LSF+NLTG IPSSLS+LPNL LRLDRN+LTG IP
Sbjct: 125 RLSWTNISGSVPDFLSQLKNLTFLDLSFSNLTGSIPSSLSQLPNLNALRLDRNKLTGHIP 184
Query: 644 DSFGSFKKPGIDLTLSHNQLSGPIPTSLGLIDPNRIDFSRNMLEGDASMLFGVN*TTEMI 465
SFG F DL LSHNQLSG IPTSL ++ + IDFSRN LEGDASM+FG+N TT+++
Sbjct: 185 KSFGEFHGSVPDLYLSHNQLSGTIPTSLAKLNFSTIDFSRNKLEGDASMIFGLNKTTQIV 244
Query: 464 DLSRNLLTFDMSKVELPTSLISLDLNHNQIYGSIPQELIKVDFLQAFNVSYNRLCGEIPQ 285
DLSRNLL F++SKVE SL SLDLNHN+I G IP L ++D LQ NVSYNRLCG+IP
Sbjct: 245 DLSRNLLEFNLSKVEFSKSLTSLDLNHNKITGGIPVGLTQLD-LQFLNVSYNRLCGQIPV 303
Query: 284 GGRLQRFQVDTYFHNRCLCGSPLPSCK 204
GG+LQ F TYFHNRCLCG+PLPSCK
Sbjct: 304 GGKLQSFDSSTYFHNRCLCGAPLPSCK 330
>dbj|BAB83520.1| polygalacturonase-inhibitor protein [Citrus sp. cv. Sainumphung]
Length = 329
Score = 341 bits (875), Expect = 9e-93
Identities = 173/267 (64%), Positives = 204/267 (75%)
Frame = -3
Query: 1004 THRITSLIISSSVPETNFSGQIPPSVGDLPYLQVLEFHKLPKLTGPIQPAIAKLTNLRWL 825
T+RI SL + + + GQIPP VGDLPYL+ L FHKLP LTGPIQPAIAKL NL+ L
Sbjct: 67 TNRINSLTVFAG----DLPGQIPPEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTL 122
Query: 824 ILTWTNISGPIPDFLSELPNLQWLHLSFNNLTGPIPSSLSKLPNLIDLRLDRNRLTGPIP 645
++WTNISGP+PDF+S+L NL +L LSFNNL+G IP SLSKL L L LDRN+LTG IP
Sbjct: 123 RISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPGSLSKLQKLGALHLDRNKLTGSIP 182
Query: 644 DSFGSFKKPGIDLTLSHNQLSGPIPTSLGLIDPNRIDFSRNMLEGDASMLFGVN*TTEMI 465
+SFG+F DL LSHNQLSG IP SLG +D N ID SRN LEGDAS LFG+N TT+ I
Sbjct: 183 ESFGTFTGSIPDLYLSHNQLSGKIPASLGSMDFNTIDLSRNKLEGDASFLFGLNKTTQRI 242
Query: 464 DLSRNLLTFDMSKVELPTSLISLDLNHNQIYGSIPQELIKVDFLQAFNVSYNRLCGEIPQ 285
D+SRNLL F++SKVE P SL +LDLNHN+I+GSIP ++ ++ L NVSYNRLCG IP
Sbjct: 243 DVSRNLLEFNLSKVEFPQSLTNLDLNHNKIFGSIPAQITSLENLGFLNVSYNRLCGPIPV 302
Query: 284 GGRLQRFQVDTYFHNRCLCGSPLPSCK 204
GG+LQ F YFHNRCLCG+PL SCK
Sbjct: 303 GGKLQSFGYTEYFHNRCLCGAPLESCK 329
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 940,495,359
Number of Sequences: 1393205
Number of extensions: 22928943
Number of successful extensions: 78824
Number of sequences better than 10.0: 1713
Number of HSP's better than 10.0 without gapping: 58578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67864
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 58221615497
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
