>KMC003013A_C01 KMC003013A_c01
ggcaAAGGCAAGGTAGTATATTAGCTATTACATATACTTTGGTAAAGTATATATTGTCAA
ACATAAGAGAGTACAATTCACAAACTCAAGTCAATCATAACTGTTTGGACTTCAAATTTG
CTATAGAACTGAACATCTATTTTAATCAATCTCTTCCCATAAACACGCTAATCTGGTGCA
AATTTTCCCCTATTAAAGCTAAAGACCATGAACATGTAAAAGTAAAGTAGACAATCTCAT
TACTTAAACAGAAAGGTTCTGCTAAAGTTACCCATCCGCGTGACCCACACCACTAAAGAA
AAGAAGAAGAAAAAAAGCAACACAAACAAACACTTTCAAATCTCTCTTGGTGGAAGAACC
CAAAAAACCCTTCTCTCACCAACTAACTAAAAATAAGGGATCAAATCATAGCATGTTTCA
ATCCCACTTATCTTTCATCAGAATGAATCAGAATCAATTCTGAAAAAGAAACTAGAAACT
ACTCACAGCATGTTTAGATTCACGTTCAGATCTTCTAGAATCAATTCTAGCTCCACGAAA
GCTACTCCTAGTAGGTTCTCCGTGATTCTCCTTCGACCGTGAAAATTTAACGTGTAT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC003013A_C01 KMC003013A_c01
         (597 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||S42875 dihydrolipoamide S-succinyltransferase (EC 2.3.1.61)...    33  3.6
gb|AAD15925.1| dihydrolipoamide succinyltransferase [Coxiella bu...    32  6.2

>pir||S42875 dihydrolipoamide S-succinyltransferase (EC 2.3.1.61) - Coxiella
           burnetii gi|457726|emb|CAA54875.1| putative
           dihydrolipoamide succinyltransferase [Coxiella burnetii]
          Length = 405

 Score = 32.7 bits (73), Expect = 3.6
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = +3

Query: 192 IKAKDHEHVKVK*TISLLKQKGS-AKVTHPRDPHH*RKEEEKKQHKQ 329
           I AK+ E VK    ++LLK+ GS AK    +D    +KE+EKK+ K+
Sbjct: 59  IVAKEGEVVKADQILALLKEGGSVAKEKEKKDEKETKKEKEKKEEKK 105

>gb|AAD15925.1| dihydrolipoamide succinyltransferase [Coxiella burnetii]
          Length = 405

 Score = 32.0 bits (71), Expect = 6.2
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = +3

Query: 192 IKAKDHEHVKVK*TISLLKQKGS-AKVTHPRDPHH*RKEEEKKQHKQ 329
           I AK+ E VK    ++LLK+ GS AK    +D    +KE+EKK+ K+
Sbjct: 59  IVAKEGEVVKADQILALLKEGGSVAKEKAKKDEKETKKEKEKKEEKK 105

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 450,176,498
Number of Sequences: 1393205
Number of extensions: 9052117
Number of successful extensions: 21744
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21699
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23140425222
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 GNf012c12 BP068234 1 437 2 MR079h09_f BP082119 4 546 3 GNf074e05 BP072845 18 512 4 SPD021g12_f BP045678 125 540 5 SPD006d10_f BP044473 218 541 6 SPD016g07_f BP045288 220 555 7 GNf096d07 BP074480 244 605

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