Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC003008A_C03 KMC003008A_c03
(716 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL13304.1|AF417577_1 leucine zipper-containing protein [Euph... 163 2e-39
ref|NP_191253.1| leucine zipper-containing protein AT103; protei... 163 3e-39
gb|AAB18942.1| AT103 [Arabidopsis thaliana] 163 3e-39
dbj|BAA87823.1| unnamed protein product [Oryza sativa (japonica ... 162 6e-39
gb|AAB19120.1| PNIL34 [Ipomoea nil] 159 3e-38
>gb|AAL13304.1|AF417577_1 leucine zipper-containing protein [Euphorbia esula]
Length = 405
Score = 163 bits (413), Expect = 2e-39
Identities = 91/152 (59%), Positives = 103/152 (66%)
Frame = -3
Query: 714 HGDFFSALMKAQPQFLNDWKAKLWSRFFCLSVYVTMYLNDCQRTDFYEGIGLNTKEFDMH 535
HGDFFSALMKAQPQFLNDWKAKLW+RFFCLSVYVTMYLNDCQRT FYEGIGL+TKEFDMH
Sbjct: 255 HGDFFSALMKAQPQFLNDWKAKLWARFFCLSVYVTMYLNDCQRTAFYEGIGLDTKEFDMH 314
Query: 534 VIIETNRTTARDFPGCS*C*EPRVQAKA*PDGGDKREDSCCW*E**HSICEELKEDPTDC 355
VIIETNRTTAR FP P + K ++ +S+ + LK P
Sbjct: 315 VIIETNRTTARIFPAVLDVENPEFKRKLDRMVVINQKLQAVGETEDNSVVKNLKRVPLIA 374
Query: 354 WPWHPSSWLHI*CHPLESGSVDLAEFEPQLVY 259
++ P+ESGSVD AEFEP+LVY
Sbjct: 375 ALVSEILAAYL-MPPIESGSVDFAEFEPKLVY 405
Score = 79.0 bits (193), Expect(2) = 7e-16
Identities = 38/49 (77%), Positives = 44/49 (89%)
Frame = -1
Query: 500 IFPAVLDVENPEFKRRLDRMVEINEKILAVGESDDIPFVKNLKRIPLIA 354
IFPAVLDVENPEFKR+LDRMV IN+K+ AVGE++D VKNLKR+PLIA
Sbjct: 326 IFPAVLDVENPEFKRKLDRMVVINQKLQAVGETEDNSVVKNLKRVPLIA 374
Score = 26.9 bits (58), Expect(2) = 7e-16
Identities = 11/16 (68%), Positives = 13/16 (80%)
Frame = -2
Query: 358 LLALASELLATYLMPP 311
+ AL SE+LA YLMPP
Sbjct: 373 IAALVSEILAAYLMPP 388
>ref|NP_191253.1| leucine zipper-containing protein AT103; protein id: At3g56940.1,
supported by cDNA: gi_1033194, supported by cDNA:
gi_7542485 [Arabidopsis thaliana]
gi|11281557|pir||T47754 leucine zipper-containing
protein AT103 - Arabidopsis thaliana
gi|6911864|emb|CAB72164.1| leucine zipper-containing
protein AT103 [Arabidopsis thaliana]
Length = 409
Score = 163 bits (412), Expect = 3e-39
Identities = 94/154 (61%), Positives = 103/154 (66%), Gaps = 2/154 (1%)
Frame = -3
Query: 714 HGDFFSALMKAQPQFLNDWKAKLWSRFFCLSVYVTMYLNDCQRTDFYEGIGLNTKEFDMH 535
HGDFFSALMKAQPQFLNDW+AKLWSRFFCLSVYVTMYLNDCQRT+FYEGIGLNTKEFDMH
Sbjct: 259 HGDFFSALMKAQPQFLNDWQAKLWSRFFCLSVYVTMYLNDCQRTNFYEGIGLNTKEFDMH 318
Query: 534 VIIETNRTTARDFPGCS*C*EPRVQAKA*PDGGDKREDSCCW*E**HSICEELKEDP--T 361
VIIETNRTTAR FP P + K + S + LK P T
Sbjct: 319 VIIETNRTTARIFPAVLDVENPEFKRKLDRMVVSYEKLLAIGETDDASFIKTLKRIPLVT 378
Query: 360 DCWPWHPSSWLHI*CHPLESGSVDLAEFEPQLVY 259
+++L P+ESGSVD AEFEP LVY
Sbjct: 379 SLASEILAAYL---MPPVESGSVDFAEFEPNLVY 409
Score = 77.8 bits (190), Expect(2) = 1e-15
Identities = 38/72 (52%), Positives = 48/72 (65%)
Frame = -1
Query: 572 KALDLTQKNLTCMSLLRQTAQRLGIFPAVLDVENPEFKRRLDRMVEINEKILAVGESDDI 393
+ + L K ++ IFPAVLDVENPEFKR+LDRMV EK+LA+GE+DD
Sbjct: 306 EGIGLNTKEFDMHVIIETNRTTARIFPAVLDVENPEFKRKLDRMVVSYEKLLAIGETDDA 365
Query: 392 PFVKNLKRIPLI 357
F+K LKRIPL+
Sbjct: 366 SFIKTLKRIPLV 377
Score = 26.9 bits (58), Expect(2) = 1e-15
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -2
Query: 352 ALASELLATYLMPP 311
+LASE+LA YLMPP
Sbjct: 379 SLASEILAAYLMPP 392
>gb|AAB18942.1| AT103 [Arabidopsis thaliana]
Length = 373
Score = 163 bits (412), Expect = 3e-39
Identities = 94/154 (61%), Positives = 103/154 (66%), Gaps = 2/154 (1%)
Frame = -3
Query: 714 HGDFFSALMKAQPQFLNDWKAKLWSRFFCLSVYVTMYLNDCQRTDFYEGIGLNTKEFDMH 535
HGDFFSALMKAQPQFLNDW+AKLWSRFFCLSVYVTMYLNDCQRT+FYEGIGLNTKEFDMH
Sbjct: 223 HGDFFSALMKAQPQFLNDWQAKLWSRFFCLSVYVTMYLNDCQRTNFYEGIGLNTKEFDMH 282
Query: 534 VIIETNRTTARDFPGCS*C*EPRVQAKA*PDGGDKREDSCCW*E**HSICEELKEDP--T 361
VIIETNRTTAR FP P + K + S + LK P T
Sbjct: 283 VIIETNRTTARIFPAVLDVENPEFKRKLDRMVVSYEKLLAIGETDDASFIKTLKRIPLVT 342
Query: 360 DCWPWHPSSWLHI*CHPLESGSVDLAEFEPQLVY 259
+++L P+ESGSVD AEFEP LVY
Sbjct: 343 SLASEILAAYL---MPPVESGSVDFAEFEPNLVY 373
Score = 77.8 bits (190), Expect(2) = 1e-15
Identities = 38/72 (52%), Positives = 48/72 (65%)
Frame = -1
Query: 572 KALDLTQKNLTCMSLLRQTAQRLGIFPAVLDVENPEFKRRLDRMVEINEKILAVGESDDI 393
+ + L K ++ IFPAVLDVENPEFKR+LDRMV EK+LA+GE+DD
Sbjct: 270 EGIGLNTKEFDMHVIIETNRTTARIFPAVLDVENPEFKRKLDRMVVSYEKLLAIGETDDA 329
Query: 392 PFVKNLKRIPLI 357
F+K LKRIPL+
Sbjct: 330 SFIKTLKRIPLV 341
Score = 26.9 bits (58), Expect(2) = 1e-15
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -2
Query: 352 ALASELLATYLMPP 311
+LASE+LA YLMPP
Sbjct: 343 SLASEILAAYLMPP 356
>dbj|BAA87823.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
gi|6721522|dbj|BAA89564.1| unnamed protein product
[Oryza sativa (japonica cultivar-group)]
Length = 408
Score = 162 bits (409), Expect = 6e-39
Identities = 92/157 (58%), Positives = 103/157 (65%), Gaps = 5/157 (3%)
Frame = -3
Query: 714 HGDFFSALMKAQPQFLNDWKAKLWSRFFCLSVYVTMYLNDCQRTDFYEGIGLNTKEFDMH 535
HGDFFSAL+KAQPQFLNDWKAKLWSRFFCLSVYVTMYLNDCQRT FYEGIGL+TKEFDMH
Sbjct: 258 HGDFFSALLKAQPQFLNDWKAKLWSRFFCLSVYVTMYLNDCQRTTFYEGIGLDTKEFDMH 317
Query: 534 VIIETNRTTARDFPGCS*C*EPRVQAKA*PDGGDKREDSCCW*E**HSICEELKEDPTDC 355
VIIETNRTTAR FP P + K ++ + + LK P
Sbjct: 318 VIIETNRTTARIFPAVLDVENPEFKRKLDRMVEINKKIIAIGESDDIPLVKNLKRIP--- 374
Query: 354 WPWHPSSWLH-----I*CHPLESGSVDLAEFEPQLVY 259
H ++ + P+ESGSVD AEFEPQLVY
Sbjct: 375 ---HVAALVSEIIAAYLMPPIESGSVDFAEFEPQLVY 408
Score = 89.4 bits (220), Expect(2) = 1e-18
Identities = 42/49 (85%), Positives = 47/49 (95%)
Frame = -1
Query: 500 IFPAVLDVENPEFKRRLDRMVEINEKILAVGESDDIPFVKNLKRIPLIA 354
IFPAVLDVENPEFKR+LDRMVEIN+KI+A+GESDDIP VKNLKRIP +A
Sbjct: 329 IFPAVLDVENPEFKRKLDRMVEINKKIIAIGESDDIPLVKNLKRIPHVA 377
Score = 25.8 bits (55), Expect(2) = 1e-18
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -2
Query: 352 ALASELLATYLMPP 311
AL SE++A YLMPP
Sbjct: 378 ALVSEIIAAYLMPP 391
>gb|AAB19120.1| PNIL34 [Ipomoea nil]
Length = 370
Score = 159 bits (403), Expect = 3e-38
Identities = 91/152 (59%), Positives = 101/152 (65%)
Frame = -3
Query: 714 HGDFFSALMKAQPQFLNDWKAKLWSRFFCLSVYVTMYLNDCQRTDFYEGIGLNTKEFDMH 535
HGDFFSALMKAQPQFLNDWKAKLW+RFFCLSVYVTMYLNDCQRT FYEGIGL+TKEFDMH
Sbjct: 220 HGDFFSALMKAQPQFLNDWKAKLWARFFCLSVYVTMYLNDCQRTAFYEGIGLDTKEFDMH 279
Query: 534 VIIETNRTTARDFPGCS*C*EPRVQAKA*PDGGDKREDSCCW*E**HSICEELKEDPTDC 355
VIIETNRTTAR FP P + K ++ + + LK P
Sbjct: 280 VIIETNRTTARIFPAVLDVENPEFKRKLDRMVEINQKLLAVGETDDIPLVKNLKRIPLVA 339
Query: 354 WPWHPSSWLHI*CHPLESGSVDLAEFEPQLVY 259
++ P+ESGSVDLAEFEPQL Y
Sbjct: 340 ALVSEILAAYL-MKPVESGSVDLAEFEPQLGY 370
Score = 91.7 bits (226), Expect = 9e-18
Identities = 43/49 (87%), Positives = 48/49 (97%)
Frame = -1
Query: 500 IFPAVLDVENPEFKRRLDRMVEINEKILAVGESDDIPFVKNLKRIPLIA 354
IFPAVLDVENPEFKR+LDRMVEIN+K+LAVGE+DDIP VKNLKRIPL+A
Sbjct: 291 IFPAVLDVENPEFKRKLDRMVEINQKLLAVGETDDIPLVKNLKRIPLVA 339
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 606,402,822
Number of Sequences: 1393205
Number of extensions: 12791046
Number of successful extensions: 34817
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 32782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34684
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 33217548346
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
