Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002990A_C01 KMC002990A_c01
(1019 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG45421.1|AF309495_1 gamete-specific hydroxyproline-rich gly... 40 3e-04
sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 precursor (... 38 4e-04
emb|CAD41509.1| OSJNBa0029H02.25 [Oryza sativa (japonica cultiva... 34 6e-04
ref|NP_032267.1| forkhead box G1; HNF-3/forkhead homolog, brain ... 46 0.001
gb|AAH46958.1| Similar to forkhead box G1 [Mus musculus] 46 0.001
>gb|AAG45421.1|AF309495_1 gamete-specific hydroxyproline-rich glycoprotein a2 [Chlamydomonas
reinhardtii]
Length = 386
Score = 39.7 bits (91), Expect(2) = 3e-04
Identities = 17/31 (54%), Positives = 18/31 (57%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P PAPP PA E PSPAP
Sbjct: 202 PPSPAPPSPLPPSPAPPSPAPPSPEPPSPAP 232
Score = 39.3 bits (90), Expect(2) = 3e-04
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P PAPP P E PSPAP
Sbjct: 232 PPSPEPPSPEPPSPAPPSPEPPSPEPPSPAP 262
Score = 38.5 bits (88), Expect(2) = 0.003
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P PAPP PA PSPAP
Sbjct: 247 PPSPEPPSPEPPSPAPPSPAPPSPVPPSPAP 277
Score = 38.5 bits (88), Expect(2) = 0.003
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P PAPP P E PSPAP
Sbjct: 217 PPSPAPPSPEPPSPAPPSPEPPSPEPPSPAP 247
Score = 37.4 bits (85), Expect(2) = 0.011
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P PAPP PA PSPAP
Sbjct: 162 PPSPLPPSPVPPSPAPPSPAPPSPAPPSPAP 192
Score = 37.0 bits (84), Expect(2) = 0.039
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P PAPP PA PSP P
Sbjct: 172 PPSPAPPSPAPPSPAPPSPAPPSPRPPSPVP 202
Score = 36.6 bits (83), Expect(2) = 0.011
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P P PP PA E PSP P
Sbjct: 212 PPSPAPPSPAPPSPEPPSPAPPSPEPPSPEP 242
Score = 36.6 bits (83), Expect(2) = 0.018
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P P PP PA E PSP P
Sbjct: 227 PPSPAPPSPEPPSPEPPSPAPPSPEPPSPEP 257
Score = 36.6 bits (83), Expect(2) = 0.018
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P PAPP P PSPAP
Sbjct: 192 PPSPRPPSPVPPSPAPPSPLPPSPAPPSPAP 222
Score = 35.8 bits (81), Expect = 1.1
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P PAPP PA PSP P
Sbjct: 167 PPSPVPPSPAPPSPAPPSPAPPSPAPPSPRP 197
Score = 35.8 bits (81), Expect = 1.1
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P P PP PA PSPAP
Sbjct: 157 PPSPAPPSPLPPSPVPPSPAPPSPAPPSPAP 187
Score = 35.8 bits (81), Expect = 1.1
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P PAPP P PSPAP
Sbjct: 177 PPSPAPPSPAPPSPAPPSPRPPSPVPPSPAP 207
Score = 35.8 bits (81), Expect(2) = 0.051
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P PAPP P PSP P
Sbjct: 252 PPSPEPPSPAPPSPAPPSPVPPSPAPPSPVP 282
Score = 35.8 bits (81), Expect = 1.1
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P PAPP P PSPAP
Sbjct: 147 PPSPMPPSPAPPSPAPPSPLPPSPVPPSPAP 177
Score = 35.4 bits (80), Expect = 1.4
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P PAPP PA PSP P
Sbjct: 142 PPSPTPPSPMPPSPAPPSPAPPSPLPPSPVP 172
Score = 35.4 bits (80), Expect = 1.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P + PP+P P P PP PA PSP P
Sbjct: 137 PKPSSPPSPTPPSPMPPSPAPPSPAPPSPLP 167
Score = 35.4 bits (80), Expect = 1.4
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P P PP PA PSPAP
Sbjct: 187 PPSPAPPSPRPPSPVPPSPAPPSPLPPSPAP 217
Score = 35.0 bits (79), Expect(2) = 0.004
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P PAPP P PSP+P
Sbjct: 262 PPSPAPPSPVPPSPAPPSPVPPSPPPPSPSP 292
Score = 35.0 bits (79), Expect = 1.9
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P P PP P PSPAP
Sbjct: 237 PPSPEPPSPAPPSPEPPSPEPPSPAPPSPAP 267
Score = 34.7 bits (78), Expect = 2.4
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P P PP P PSPAP
Sbjct: 152 PPSPAPPSPAPPSPLPPSPVPPSPAPPSPAP 182
Score = 34.7 bits (78), Expect = 2.4
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P P PP PA PSP P
Sbjct: 242 PPSPAPPSPEPPSPEPPSPAPPSPAPPSPVP 272
Score = 34.3 bits (77), Expect = 3.2
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P P PP PA PSP P
Sbjct: 257 PPSPAPPSPAPPSPVPPSPAPPSPVPPSPPP 287
Score = 33.9 bits (76), Expect = 4.2
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P PAPP P PSP P
Sbjct: 207 PPSPLPPSPAPPSPAPPSPEPPSPAPPSPEP 237
Score = 33.9 bits (76), Expect = 4.2
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P P PP PA PSP P
Sbjct: 197 PPSPVPPSPAPPSPLPPSPAPPSPAPPSPEP 227
Score = 33.1 bits (74), Expect = 7.1
Identities = 13/31 (41%), Positives = 14/31 (44%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P P PP P PSP P
Sbjct: 222 PPSPEPPSPAPPSPEPPSPEPPSPAPPSPEP 252
Score = 32.7 bits (73), Expect = 9.3
Identities = 13/31 (41%), Positives = 14/31 (44%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P P PP P PSP P
Sbjct: 182 PPSPAPPSPAPPSPRPPSPVPPSPAPPSPLP 212
Score = 29.3 bits (64), Expect(2) = 0.64
Identities = 10/19 (52%), Positives = 12/19 (62%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLP 973
P PP+PP P P+PP P
Sbjct: 277 PPSPVPPSPPPPSPSPPTP 295
Score = 28.1 bits (61), Expect(2) = 0.004
Identities = 17/58 (29%), Positives = 25/58 (42%)
Frame = +1
Query: 763 SPANPHSLHRHGS*THQHPENTPHSAAAPCNSSPPSLSSHASPPSTPELKLPAPNTPS 936
SPA P L + P + + AP + PPS + P +PE P P +P+
Sbjct: 204 SPAPPSPLPPSPAPPSPAPPSPEPPSPAPPSPEPPSPEPPSPAPPSPEPPSPEPPSPA 261
Score = 27.7 bits (60), Expect(2) = 3e-04
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +1
Query: 763 SPANPHSLHRHGS*THQHPENTPHSAAAPCNSSPPSLSSHASPPSTPELKLPAPNTP 933
SPA P + P + + AP + PPS + + P +PE PAP +P
Sbjct: 179 SPAPPSPAPPSPAPPSPRPPSPVPPSPAPPSPLPPSPAPPSPAPPSPEPPSPAPPSP 235
Score = 27.3 bits (59), Expect(2) = 3e-04
Identities = 14/36 (38%), Positives = 19/36 (51%)
Frame = +1
Query: 826 TPHSAAAPCNSSPPSLSSHASPPSTPELKLPAPNTP 933
+P S P SSPPS + + P +P PAP +P
Sbjct: 130 SPPSPMPPKPSSPPSPTPPSPMPPSPAPPSPAPPSP 165
Score = 26.2 bits (56), Expect(2) = 0.64
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 817 PENTPHSAAAPCNSSPPSLSSHASPPSTPELKLPAPNTPS 936
P P S P + PPS + + P +PE PAP +P+
Sbjct: 228 PSPAPPSPEPP-SPEPPSPAPPSPEPPSPEPPSPAPPSPA 266
Score = 25.0 bits (53), Expect(2) = 0.003
Identities = 13/40 (32%), Positives = 20/40 (49%)
Frame = +1
Query: 817 PENTPHSAAAPCNSSPPSLSSHASPPSTPELKLPAPNTPS 936
P P S A P + +PPS + + P +P P P +P+
Sbjct: 168 PSPVPPSPAPP-SPAPPSPAPPSPAPPSPRPPSPVPPSPA 206
Score = 25.0 bits (53), Expect(2) = 0.011
Identities = 15/44 (34%), Positives = 22/44 (49%), Gaps = 4/44 (9%)
Frame = +1
Query: 817 PENTPHS----AAAPCNSSPPSLSSHASPPSTPELKLPAPNTPS 936
P TP S + AP + +PPS + P +P PAP +P+
Sbjct: 143 PSPTPPSPMPPSPAPPSPAPPSPLPPSPVPPSPAPPSPAPPSPA 186
Score = 25.0 bits (53), Expect(2) = 0.003
Identities = 14/39 (35%), Positives = 20/39 (50%)
Frame = +1
Query: 817 PENTPHSAAAPCNSSPPSLSSHASPPSTPELKLPAPNTP 933
P P S A P + +PPS + + P +P PAP +P
Sbjct: 173 PSPAPPSPAPP-SPAPPSPAPPSPRPPSPVPPSPAPPSP 210
Score = 24.3 bits (51), Expect(2) = 0.018
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 817 PENTPHSAAAPCNSSPPSLSSHASPPSTPELKLPAPNTPS 936
P P S A P P + +PPS P PAP +P+
Sbjct: 153 PSPAPPSPAPPSPLPPSPVPPSPAPPS-PAPPSPAPPSPA 191
Score = 24.3 bits (51), Expect(2) = 0.018
Identities = 16/58 (27%), Positives = 24/58 (40%)
Frame = +1
Query: 763 SPANPHSLHRHGS*THQHPENTPHSAAAPCNSSPPSLSSHASPPSTPELKLPAPNTPS 936
SPA P L P + + AP + +PPS + P +P P P +P+
Sbjct: 159 SPAPPSPLPPSPVPPSPAPPSPAPPSPAPPSPAPPSPRPPSPVPPSPAPPSPLPPSPA 216
Score = 24.3 bits (51), Expect(2) = 0.011
Identities = 11/39 (28%), Positives = 18/39 (45%)
Frame = +1
Query: 817 PENTPHSAAAPCNSSPPSLSSHASPPSTPELKLPAPNTP 933
P P ++P + +PPS + P +P P P +P
Sbjct: 132 PSPMPPKPSSPPSPTPPSPMPPSPAPPSPAPPSPLPPSP 170
Score = 23.5 bits (49), Expect(2) = 0.051
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 817 PENTPHSAAAPCNSSPPSLSSHASPPSTPELKLPAPNTPS 936
P P S A P + PPS + P +P PAP +P+
Sbjct: 183 PSPAPPSPAPP-SPRPPSPVPPSPAPPSPLPPSPAPPSPA 221
Score = 22.7 bits (47), Expect(2) = 0.039
Identities = 14/60 (23%), Positives = 27/60 (44%)
Frame = +1
Query: 757 ESSPANPHSLHRHGS*THQHPENTPHSAAAPCNSSPPSLSSHASPPSTPELKLPAPNTPS 936
++SPA+ L + P+ + + P + PPS + + P +P P P +P+
Sbjct: 117 QASPADNVYLKSLSPPSPMPPKPSSPPSPTPPSPMPPSPAPPSPAPPSPLPPSPVPPSPA 176
>sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 precursor (Hydroxyproline-rich
glycoprotein 1) gi|12018147|gb|AAG45420.1|AF309494_1
vegetative cell wall protein gp1 [Chlamydomonas
reinhardtii]
Length = 555
Score = 38.1 bits (87), Expect(2) = 8e-04
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P PAPP PA PSPAP
Sbjct: 88 PPSPAPPSPAPPSPAPPSPAPPSPAPPSPAP 118
Score = 38.1 bits (87), Expect(2) = 0.038
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P PAPP PA PSPAP
Sbjct: 83 PPSPAPPSPAPPSPAPPSPAPPSPAPPSPAP 113
Score = 38.1 bits (87), Expect = 0.22
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P PAPP PA PSPAP
Sbjct: 73 PAPPSPPSPAPPSPAPPSPAPPSPAPPSPAP 103
Score = 38.1 bits (87), Expect = 0.22
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +2
Query: 911 NYPHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
N P PP+P P PAPP PA PSP P
Sbjct: 38 NCPPSPAPPSPAPPSPAPPSPAPPSPAPPSPGP 70
Score = 38.1 bits (87), Expect(2) = 0.014
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P PAPP PA PSPAP
Sbjct: 78 PPSPAPPSPAPPSPAPPSPAPPSPAPPSPAP 108
Score = 37.7 bits (86), Expect = 0.29
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P PAPP PA PSPAP
Sbjct: 45 PPSPAPPSPAPPSPAPPSPAPPSPGPPSPAP 75
Score = 37.0 bits (84), Expect(2) = 0.004
Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = +2
Query: 917 PHQTHPPAPPS---PEPAPPLPAQDKSEQPSPAP 1009
P PPAPPS P PAPP PA + P+P P
Sbjct: 233 PPSPSPPAPPSPVPPSPAPPSPAPPSPKPPAPPP 266
Score = 36.6 bits (83), Expect(2) = 4e-04
Identities = 17/37 (45%), Positives = 20/37 (53%), Gaps = 3/37 (8%)
Frame = +2
Query: 917 PHQTHPPAP---PSPEPAPPLPAQDKSEQPSPAPLDS 1018
P PP+P P P PAPP P+ S PSP+P S
Sbjct: 322 PPSPAPPSPAPSPPPSPAPPTPSPSPSPSPSPSPSPS 358
Score = 36.2 bits (82), Expect(2) = 0.011
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP PPSP P P+P PSPAP
Sbjct: 297 PAPPTPPTPPSPSPPSPVPPSPAPVPPSPAP 327
Score = 35.8 bits (81), Expect(2) = 0.006
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = +2
Query: 917 PHQTHPPAPPSPEP-APPLPAQDKSEQPSPAP 1009
P PP PPSP P PP PA PSP+P
Sbjct: 152 PPSPSPPVPPSPSPPVPPSPAPPSPTPPSPSP 183
Score = 35.8 bits (81), Expect(2) = 0.002
Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +2
Query: 917 PHQTHPPAPPSPEP---APPLPAQDKSEQPSP 1003
P PPAPPSP P APPLP PSP
Sbjct: 126 PPSPSPPAPPSPSPPSPAPPLPPSPAPPSPSP 157
Score = 34.7 bits (78), Expect(2) = 0.14
Identities = 17/37 (45%), Positives = 18/37 (47%), Gaps = 6/37 (16%)
Frame = +2
Query: 917 PHQTHPPAPPSP------EPAPPLPAQDKSEQPSPAP 1009
P PP+PPSP PAPP P PSPAP
Sbjct: 220 PPSPAPPSPPSPAPPSPSPPAPPSPVPPSPAPPSPAP 256
Score = 34.3 bits (77), Expect(2) = 0.003
Identities = 15/34 (44%), Positives = 17/34 (49%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAPLDS 1018
P P PPSP P P P+ S PSP+P S
Sbjct: 327 PPSPAPSPPPSPAPPTPSPSPSPSPSPSPSPSPS 360
Score = 33.9 bits (76), Expect = 4.2
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAP-------PLPAQDKSEQPSPAPLDS 1018
P PAPP+P P+P P P+ S PSP+P+ S
Sbjct: 332 PSPPPSPAPPTPSPSPSPSPSPSPSPSPSPSPSPSPSPIPS 372
Score = 33.9 bits (76), Expect(2) = 0.030
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +2
Query: 917 PHQTHPPAPPSP-EPAPPLPAQDKSEQPSPAP 1009
P PP+PPSP P+P PA PSPAP
Sbjct: 113 PPSPAPPSPPSPAPPSPSPPAPPSPSPPSPAP 144
Score = 33.9 bits (76), Expect = 4.2
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSP 1003
P PP+P P PAPP PA PSP
Sbjct: 93 PPSPAPPSPAPPSPAPPSPAPPSPAPPSP 121
Score = 33.9 bits (76), Expect(2) = 0.038
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
P PP+P P PAPP PA PSPAP
Sbjct: 98 PPSPAPPSPAPPSPAPPSPA--PPSPPSPAP 126
Score = 33.5 bits (75), Expect(2) = 0.005
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 10/41 (24%)
Frame = +2
Query: 917 PHQTHPPAPPSPEPAP----------PLPAQDKSEQPSPAP 1009
P PP PPSP P P P+P S PSPAP
Sbjct: 259 PKPPAPPPPPSPPPPPPPRPPFPANTPMPPSPPSPPPSPAP 299
Score = 32.7 bits (73), Expect(2) = 0.004
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = +2
Query: 935 PAPPSPEPAPPLPAQDKSEQPSPAP 1009
PAP P PAPP PA S PSPAP
Sbjct: 318 PAPVPPSPAPPSPA--PSPPPSPAP 340
Score = 32.7 bits (73), Expect(2) = 0.38
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 935 PAPPSPEPAPPLPAQDKSEQPSPAP 1009
P+PPSP P P P PSPAP
Sbjct: 308 PSPPSPVPPSPAPVPPSPAPPSPAP 332
Score = 32.7 bits (73), Expect(2) = 0.082
Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Frame = +2
Query: 917 PHQTHPPAPPS---PEPAPPLPAQDKSEQPSPAP 1009
P PP PPS P PAPP+P PSPAP
Sbjct: 178 PPSPSPPVPPSPAPPSPAPPVP--PSPAPPSPAP 209
Score = 32.3 bits (72), Expect(2) = 1.3
Identities = 15/35 (42%), Positives = 19/35 (53%), Gaps = 8/35 (22%)
Frame = +2
Query: 932 PPAPPSPEPA--------PPLPAQDKSEQPSPAPL 1012
PP+PPSP P+ PP P+ PSPAP+
Sbjct: 287 PPSPPSPPPSPAPPTPPTPPSPSPPSPVPPSPAPV 321
Score = 30.4 bits (67), Expect(2) = 1.3
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +2
Query: 917 PHQTHPPAP-PSPEPAP-PLPAQDKSEQPSPAPL 1012
P + P+P PSP P+P P P S +PSP+P+
Sbjct: 349 PSPSPSPSPSPSPSPSPSPSPIPSPSPKPSPSPV 382
Score = 30.4 bits (67), Expect(2) = 0.004
Identities = 17/44 (38%), Positives = 22/44 (49%)
Frame = +1
Query: 817 PENTPHSAAAPCNSSPPSLSSHASPPSTPELKLPAPNTPSCAAV 948
P NTP + P SPP + +PP+ P P+P PS A V
Sbjct: 281 PANTPMPPSPP---SPPPSPAPPTPPTPPSPSPPSPVPPSPAPV 321
Score = 30.0 bits (66), Expect(2) = 4e-04
Identities = 14/39 (35%), Positives = 18/39 (45%)
Frame = +1
Query: 817 PENTPHSAAAPCNSSPPSLSSHASPPSTPELKLPAPNTP 933
P P A P SPPS +PP+ P P+P +P
Sbjct: 275 PPRPPFPANTPMPPSPPSPPPSPAPPTPPTPPSPSPPSP 313
Score = 29.3 bits (64), Expect(2) = 0.005
Identities = 17/43 (39%), Positives = 22/43 (50%), Gaps = 1/43 (2%)
Frame = +1
Query: 817 PENTPHSAAAPCNSSPPSLSSHA-SPPSTPELKLPAPNTPSCA 942
P P S +P SPPS + + SPP+ P P+P PS A
Sbjct: 213 PSPAPPSPPSPAPPSPPSPAPPSPSPPAPPSPVPPSPAPPSPA 255
Score = 29.3 bits (64), Expect(2) = 0.003
Identities = 16/42 (38%), Positives = 21/42 (49%)
Frame = +1
Query: 817 PENTPHSAAAPCNSSPPSLSSHASPPSTPELKLPAPNTPSCA 942
P + P S A P +PPS S + P +P P+P PS A
Sbjct: 290 PPSPPPSPAPPTPPTPPSPSPPSPVPPSPAPVPPSPAPPSPA 331
Score = 28.1 bits (61), Expect(2) = 0.002
Identities = 13/40 (32%), Positives = 18/40 (44%)
Frame = +1
Query: 817 PENTPHSAAAPCNSSPPSLSSHASPPSTPELKLPAPNTPS 936
P P S A P + P +PPS P P+P+ P+
Sbjct: 94 PSPAPPSPAPPSPAPPSPAPPSPAPPSPPSPAPPSPSPPA 133
Score = 27.3 bits (59), Expect(2) = 8e-04
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +1
Query: 817 PENTPHSAAAPCNSSPPSLSSHASPPSTPELKLPAPNTPSCA 942
P P S A P + P +PPS P P+P PS A
Sbjct: 51 PSPAPPSPAPPSPAPPSPGPPSPAPPSPPSPAPPSPAPPSPA 92
Score = 26.6 bits (57), Expect(2) = 0.006
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 763 SPANPHSLHRHGS*THQHPENTPHSAAAPCNSSPPSLSSHASP-PSTPELKLPAPNTPS 936
SPA P + P + + AP + +PPS + + P P+ P PAP +PS
Sbjct: 80 SPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPPSPAPPSPSPPAPPSPS 138
Score = 26.2 bits (56), Expect(2) = 0.004
Identities = 15/46 (32%), Positives = 20/46 (42%), Gaps = 6/46 (13%)
Frame = +1
Query: 817 PENTPHSAAAPCNSSP------PSLSSHASPPSTPELKLPAPNTPS 936
P P S A P SP P + +PPS P P+P +P+
Sbjct: 187 PSPAPPSPAPPVPPSPAPPSPAPPVPPSPAPPSPPSPAPPSPPSPA 232
Score = 26.2 bits (56), Expect(2) = 0.030
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 817 PENTPHSAAAPCNSSPPSLSSHASPPSTPELKLPAPNTPS 936
P P S A P + +PPS + + P +P PAP +P+
Sbjct: 79 PSPAPPSPAPP-SPAPPSPAPPSPAPPSPAPPSPAPPSPA 117
Score = 25.8 bits (55), Expect(2) = 0.082
Identities = 20/59 (33%), Positives = 27/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 763 SPANPHSLHRHGS*THQHPENTPHSAAAPCNSSPPSLSSHASPPSTPEL-KLPAPNTPS 936
SPA P + P + P + AP + SPP+ S + P P L PAP +PS
Sbjct: 100 SPAPPSPAPPSPAPPSPAPPSPP--SPAPPSPSPPAPPSPSPPSPAPPLPPSPAPPSPS 156
Score = 25.8 bits (55), Expect(2) = 0.038
Identities = 15/40 (37%), Positives = 20/40 (49%)
Frame = +1
Query: 817 PENTPHSAAAPCNSSPPSLSSHASPPSTPELKLPAPNTPS 936
P P S A P SPPS + + P +P PAP +P+
Sbjct: 66 PSPGPPSPAPP---SPPSPAPPSPAPPSPAPPSPAPPSPA 102
Score = 25.4 bits (54), Expect(2) = 0.011
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 817 PENTPHSAAAPCNSSPPSLSSHASPPSTPELKLPAP-NTP 933
P P S A P + PP+ SPP P + P P NTP
Sbjct: 247 PSPAPPSPAPP-SPKPPAPPPPPSPPPPPPPRPPFPANTP 285
Score = 23.9 bits (50), Expect(2) = 1.3
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 829 PHSAAAPCNSSPPSLSSHASPPSTPELKLPAPN 927
P A P + +PPS + SPP +P P+P+
Sbjct: 316 PSPAPVPPSPAPPSPAP--SPPPSPAPPTPSPS 346
Score = 23.5 bits (49), Expect(2) = 0.38
Identities = 14/39 (35%), Positives = 16/39 (40%)
Frame = +1
Query: 817 PENTPHSAAAPCNSSPPSLSSHASPPSTPELKLPAPNTP 933
P P S A P + +PPS A PP P P P
Sbjct: 242 PSPVPPSPAPP-SPAPPSPKPPAPPPPPSPPPPPPPRPP 279
Score = 23.1 bits (48), Expect(2) = 0.14
Identities = 13/32 (40%), Positives = 17/32 (52%), Gaps = 1/32 (3%)
Frame = +1
Query: 844 APCNSSPPSLSSHASP-PSTPELKLPAPNTPS 936
AP + SPP S + P P +P P P +PS
Sbjct: 151 APPSPSPPVPPSPSPPVPPSPAPPSPTPPSPS 182
Score = 23.1 bits (48), Expect(2) = 0.014
Identities = 10/29 (34%), Positives = 16/29 (54%)
Frame = +1
Query: 847 PCNSSPPSLSSHASPPSTPELKLPAPNTP 933
P + +PPS + + P +P PAP +P
Sbjct: 40 PPSPAPPSPAPPSPAPPSPAPPSPAPPSP 68
Score = 21.9 bits (45), Expect(2) = 1.3
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 835 SAAAPCNSSPPSLSSHASPPSTPELKLPAPNTP 933
S AP + PPS + + P +P K PAP P
Sbjct: 237 SPPAPPSPVPPSPAPPSPAPPSP--KPPAPPPP 267
Score = 21.6 bits (44), Expect(2) = 0.038
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 862 PPSLSSHASPPSTPELKLPAPNTPS 936
PPS + + P +P PAP +P+
Sbjct: 40 PPSPAPPSPAPPSPAPPSPAPPSPA 64
>emb|CAD41509.1| OSJNBa0029H02.25 [Oryza sativa (japonica cultivar-group)]
gi|21740760|emb|CAD41237.1| OSJNBa0067K08.1 [Oryza sativa
(japonica cultivar-group)]
Length = 472
Score = 34.3 bits (77), Expect(2) = 0.002
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 926 THPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
T P +PP+P+P+ P PA + +PSP P
Sbjct: 126 TTPSSPPAPKPSSPPPAATPTTKPSPPP 153
Score = 33.5 bits (75), Expect(2) = 6e-04
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 817 PENTPHSAAAPCNSSPPSLSSHASPPSTPELKLPAP 924
P TP S AP SSPP ++ + PS P PAP
Sbjct: 124 PSTTPSSPPAPKPSSPPPAATPTTKPSPPPSSPPAP 159
Score = 32.3 bits (72), Expect(2) = 6e-04
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 11/40 (27%)
Frame = +2
Query: 932 PPAPPSPEPAPPLP-----------AQDKSEQPSPAPLDS 1018
P +PP+P P+PPLP A S P PAP +S
Sbjct: 153 PSSPPAPRPSPPLPPRTPPPPPPAAAPKPSPSPPPAPTNS 192
Score = 31.2 bits (69), Expect(2) = 0.11
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 932 PPAPPSPEPAPPLPAQDKSEQPSPAP 1009
PPAP P P P P+ S P+P P
Sbjct: 111 PPAPKPPSPPAPSPSTTPSSPPAPKP 136
Score = 29.6 bits (65), Expect(2) = 0.002
Identities = 12/38 (31%), Positives = 19/38 (49%)
Frame = +1
Query: 820 ENTPHSAAAPCNSSPPSLSSHASPPSTPELKLPAPNTP 933
+ TP + A P ++ P ++ +S P TP P P P
Sbjct: 60 QRTPPTPATPAKAASPPATNSSSSPRTPAAPAPRPPQP 97
Score = 26.9 bits (58), Expect(2) = 0.11
Identities = 18/63 (28%), Positives = 29/63 (45%), Gaps = 3/63 (4%)
Frame = +1
Query: 757 ESSPANPHSLHRHGS*THQHPENTPHSAAAPCN---SSPPSLSSHASPPSTPELKLPAPN 927
+ +P P + + S + ++P + AAP PP+ S + PS+P PAP
Sbjct: 60 QRTPPTPATPAKAASPPATNSSSSPRTPAAPAPRPPQPPPATSPAPTKPSSP----PAPK 115
Query: 928 TPS 936
PS
Sbjct: 116 PPS 118
>ref|NP_032267.1| forkhead box G1; HNF-3/forkhead homolog, brain factor 1 [Mus
musculus] gi|2494483|sp|Q60987|FXGB_MOUSE Forkhead box
protein G1B (Forkhead-related protein FKHL1)
(Transcription factor BF-1) (Brain factor 1) (BF1)
gi|1036833|gb|AAB42158.1| brain factor-1
Length = 481
Score = 45.8 bits (107), Expect = 0.001
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = +2
Query: 860 HLLPYHLMHHRHQLXS*NYPHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
H +H HH H H H P PP+P+P PP P Q + +QP PAP
Sbjct: 39 HHNSHHPQHHHHH-------HHHHHPPPPAPQPPPP-PPQQQQQQPPPAP 80
>gb|AAH46958.1| Similar to forkhead box G1 [Mus musculus]
Length = 478
Score = 45.8 bits (107), Expect = 0.001
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = +2
Query: 860 HLLPYHLMHHRHQLXS*NYPHQTHPPAPPSPEPAPPLPAQDKSEQPSPAP 1009
H +H HH H H H P PP+P+P PP P Q + +QP PAP
Sbjct: 36 HHNSHHPQHHHHH-------HHHHHPPPPAPQPPPP-PPQQQQQQPPPAP 77
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 900,968,237
Number of Sequences: 1393205
Number of extensions: 21965568
Number of successful extensions: 209659
Number of sequences better than 10.0: 870
Number of HSP's better than 10.0 without gapping: 87903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 174996
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 59325342805
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
