Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002961A_C01 KMC002961A_c01
(614 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_567980.1| putative protein; protein id: At4g35230.1, supp... 175 4e-43
pir||T06134 hypothetical protein F23E12.210 - Arabidopsis thalia... 166 2e-40
gb|AAG13605.1|AC051633_21 protein kinase-like protein [Oryza sat... 155 3e-37
ref|NP_175512.1| protein kinase, putative; protein id: At1g50990... 123 2e-27
ref|NP_179301.1| putative protein kinase; protein id: At2g17090.... 120 2e-26
>ref|NP_567980.1| putative protein; protein id: At4g35230.1, supported by cDNA:
gi_16612248 [Arabidopsis thaliana]
gi|16612249|gb|AAL27496.1|AF439824_1
AT4g35230/F23E12_210 [Arabidopsis thaliana]
gi|22655470|gb|AAM98327.1| At4g35230/F23E12_210
[Arabidopsis thaliana]
Length = 512
Score = 175 bits (444), Expect = 4e-43
Identities = 85/95 (89%), Positives = 88/95 (92%)
Frame = -2
Query: 613 DFKTAIDNYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYM 434
DFKTAID YSQFIDVGTMVSPTVF RRSLCYLLCDQPD ALRDAMQAQCVYPDWPTAFYM
Sbjct: 418 DFKTAIDCYSQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQCVYPDWPTAFYM 477
Query: 433 QSVALAKLDMHKDAADMLNEATALEEKKQRGARGS 329
QSVALAKL+M+ DAADMLNEA LEEK+QRG RGS
Sbjct: 478 QSVALAKLNMNTDAADMLNEAAQLEEKRQRGGRGS 512
>pir||T06134 hypothetical protein F23E12.210 - Arabidopsis thaliana
gi|3080427|emb|CAA18746.1| putative protein [Arabidopsis
thaliana] gi|7270475|emb|CAB80240.1| putative protein
[Arabidopsis thaliana]
Length = 524
Score = 166 bits (421), Expect = 2e-40
Identities = 85/107 (79%), Positives = 88/107 (81%), Gaps = 12/107 (11%)
Frame = -2
Query: 613 DFKTAIDNYSQ------------FIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQ 470
DFKTAID YSQ FIDVGTMVSPTVF RRSLCYLLCDQPD ALRDAMQAQ
Sbjct: 418 DFKTAIDCYSQNSYGYIHCFCGQFIDVGTMVSPTVFGRRSLCYLLCDQPDAALRDAMQAQ 477
Query: 469 CVYPDWPTAFYMQSVALAKLDMHKDAADMLNEATALEEKKQRGARGS 329
CVYPDWPTAFYMQSVALAKL+M+ DAADMLNEA LEEK+QRG RGS
Sbjct: 478 CVYPDWPTAFYMQSVALAKLNMNTDAADMLNEAAQLEEKRQRGGRGS 524
>gb|AAG13605.1|AC051633_21 protein kinase-like protein [Oryza sativa]
Length = 522
Score = 155 bits (393), Expect = 3e-37
Identities = 71/94 (75%), Positives = 85/94 (89%)
Frame = -2
Query: 613 DFKTAIDNYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYM 434
+FK AID Y+QF+DVGTMVSPTV+ARRSLC+L+CDQPD ALRDAMQAQCVYPDWPTAFYM
Sbjct: 428 NFKQAIDCYTQFVDVGTMVSPTVYARRSLCHLMCDQPDAALRDAMQAQCVYPDWPTAFYM 487
Query: 433 QSVALAKLDMHKDAADMLNEATALEEKKQRGARG 332
Q+VAL+KL+M D+ DMLNEA+ LEEK+Q+ +G
Sbjct: 488 QAVALSKLNMQSDSLDMLNEASQLEEKRQKSIKG 521
>ref|NP_175512.1| protein kinase, putative; protein id: At1g50990.1 [Arabidopsis
thaliana] gi|25405422|pir||B96547 probable protein
kinase [imported] - Arabidopsis thaliana
gi|12321787|gb|AAG50929.1|AC079284_4 protein kinase,
putative [Arabidopsis thaliana]
Length = 476
Score = 123 bits (309), Expect = 2e-27
Identities = 56/87 (64%), Positives = 70/87 (80%)
Frame = -2
Query: 610 FKTAIDNYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYMQ 431
F+ FI++G M+SPTV+ARRS+CYL CDQPD ALRDAMQAQCVY DWPTAFY+Q
Sbjct: 388 FQQWAQQIKDFIEIGIMISPTVYARRSMCYLFCDQPDAALRDAMQAQCVYSDWPTAFYLQ 447
Query: 430 SVALAKLDMHKDAADMLNEATALEEKK 350
+VAL+KL+M +D+A ML EA LE+K+
Sbjct: 448 AVALSKLNMVEDSATMLKEALILEDKR 474
>ref|NP_179301.1| putative protein kinase; protein id: At2g17090.1 [Arabidopsis
thaliana] gi|25411779|pir||A84548 probable protein
kinase [imported] - Arabidopsis thaliana
Length = 465
Score = 120 bits (300), Expect = 2e-26
Identities = 58/88 (65%), Positives = 70/88 (78%)
Frame = -2
Query: 613 DFKTAIDNYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYM 434
DFKTAI YSQF++ ++V P+V+ARRSL YL CD+P+ AL D M AQ V+PDWPTAFY+
Sbjct: 378 DFKTAIACYSQFVEERSLVYPSVYARRSLSYLFCDEPEKALLDGMHAQGVFPDWPTAFYL 437
Query: 433 QSVALAKLDMHKDAADMLNEATALEEKK 350
QSVALAKLDM+ D+AD L EA LE KK
Sbjct: 438 QSVALAKLDMNTDSADTLKEAALLEVKK 465
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 507,089,243
Number of Sequences: 1393205
Number of extensions: 10243128
Number of successful extensions: 22467
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 21903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22455
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24854530794
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
