Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002957A_C01 KMC002957A_c01
(602 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC42980.1| putative alpha-soluble NSF attachment protein [A... 127 1e-28
ref|NP_191178.1| alpha-soluble NSF attachment protein; protein i... 127 1e-28
sp|P93798|SNAA_VITVI Alpha-soluble NSF attachment protein (Alpha... 125 5e-28
sp|Q9M5P8|SNAA_SOLTU Alpha-soluble NSF attachment protein (Alpha... 122 5e-27
ref|NP_191204.1| alpha-soluble NSF attachment protein-like; prot... 73 3e-12
>dbj|BAC42980.1| putative alpha-soluble NSF attachment protein [Arabidopsis
thaliana]
Length = 289
Score = 127 bits (319), Expect = 1e-28
Identities = 60/74 (81%), Positives = 70/74 (94%)
Frame = -2
Query: 601 LERYQELDPTFSGTREYRLLADIAAAVDEEDLEKFTVVLKEFDSMTPLDSWKTTLLLRVK 422
LE+YQ+LDPTF+GTRE + LAD+A+A+DEED+ KFT V+KEFDSMTPLDSWKTT+LLRVK
Sbjct: 216 LEKYQDLDPTFTGTRECKFLADLASAIDEEDIAKFTDVVKEFDSMTPLDSWKTTMLLRVK 275
Query: 421 EKLKAKELEEDDLT 380
EKLKAKELEEDDLT
Sbjct: 276 EKLKAKELEEDDLT 289
>ref|NP_191178.1| alpha-soluble NSF attachment protein; protein id: At3g56190.1,
supported by cDNA: gi_6013203 [Arabidopsis thaliana]
gi|18203446|sp|Q9SPE6|SNA2_ARATH Alpha-soluble NSF
attachment protein 2 (Alpha-SNAP2)
(N-ethylmaleimide-sensitive factor attachment protein,
alpha 2) gi|11357166|pir||T47736 alpha-soluble NSF
attachment protein - Arabidopsis thaliana
gi|6013204|gb|AAF01284.1|AF177989_1 alpha-soluble NSF
attachment protein; alpha-SNAP [Arabidopsis thaliana]
gi|7572917|emb|CAB87418.1| alpha-soluble NSF attachment
protein [Arabidopsis thaliana]
Length = 289
Score = 127 bits (319), Expect = 1e-28
Identities = 60/74 (81%), Positives = 70/74 (94%)
Frame = -2
Query: 601 LERYQELDPTFSGTREYRLLADIAAAVDEEDLEKFTVVLKEFDSMTPLDSWKTTLLLRVK 422
LE+YQ+LDPTF+GTRE + LAD+A+A+DEED+ KFT V+KEFDSMTPLDSWKTT+LLRVK
Sbjct: 216 LEKYQDLDPTFTGTRECKFLADLASAIDEEDIAKFTDVVKEFDSMTPLDSWKTTMLLRVK 275
Query: 421 EKLKAKELEEDDLT 380
EKLKAKELEEDDLT
Sbjct: 276 EKLKAKELEEDDLT 289
>sp|P93798|SNAA_VITVI Alpha-soluble NSF attachment protein (Alpha-SNAP)
(N-ethylmaleimide-sensitive factor attachment protein,
alpha) gi|11362202|pir||T50776 hypothetical protein
[imported] - Vitis vinifera gi|1854386|dbj|BAA19246.1|
similar to soluble NSF attachment protein [Vitis
vinifera]
Length = 289
Score = 125 bits (313), Expect = 5e-28
Identities = 60/74 (81%), Positives = 68/74 (91%)
Frame = -2
Query: 601 LERYQELDPTFSGTREYRLLADIAAAVDEEDLEKFTVVLKEFDSMTPLDSWKTTLLLRVK 422
L+RYQE+DPTFSGTREY+LL D+AAAVDEED+ KFT +KEFDSMT LD+WKTTLLLRVK
Sbjct: 216 LDRYQEMDPTFSGTREYKLLVDLAAAVDEEDVVKFTDAVKEFDSMTQLDAWKTTLLLRVK 275
Query: 421 EKLKAKELEEDDLT 380
E +KAKELEEDDLT
Sbjct: 276 EAIKAKELEEDDLT 289
>sp|Q9M5P8|SNAA_SOLTU Alpha-soluble NSF attachment protein (Alpha-SNAP)
(N-ethylmaleimide-sensitive factor attachment protein,
alpha) gi|11358953|pir||T50777 soluble NSF attachment
protein [imported] - potato
gi|7141302|gb|AAF37280.1|AF225512_1 soluble NSF
attachment protein [Solanum tuberosum]
Length = 288
Score = 122 bits (305), Expect = 5e-27
Identities = 59/74 (79%), Positives = 67/74 (89%)
Frame = -2
Query: 601 LERYQELDPTFSGTREYRLLADIAAAVDEEDLEKFTVVLKEFDSMTPLDSWKTTLLLRVK 422
LERYQELDPTFSGTRE +LL D+AAA+DEED+ KFT +KE+DSMT LD+W+TTLLLRVK
Sbjct: 215 LERYQELDPTFSGTRECKLLVDLAAAIDEEDVAKFTDAVKEYDSMTQLDAWRTTLLLRVK 274
Query: 421 EKLKAKELEEDDLT 380
E LKAKELEEDDLT
Sbjct: 275 ETLKAKELEEDDLT 288
>ref|NP_191204.1| alpha-soluble NSF attachment protein-like; protein id: At3g56450.1
[Arabidopsis thaliana] gi|28201894|sp|Q9LXZ5|SNA1_ARATH
Alpha-soluble NSF attachment protein 1 (Alpha-SNAP1)
(N-ethylmaleimide-sensitive factor attachment protein,
alpha 1) gi|11357167|pir||T49046 alpha-soluble NSF
attachment protein-like - Arabidopsis thaliana
gi|7594523|emb|CAB88048.1| alpha-soluble NSF attachment
protein-like [Arabidopsis thaliana]
Length = 381
Score = 72.8 bits (177), Expect = 3e-12
Identities = 33/48 (68%), Positives = 42/48 (86%)
Frame = -2
Query: 601 LERYQELDPTFSGTREYRLLADIAAAVDEEDLEKFTVVLKEFDSMTPL 458
LE+YQ+LDPTFSGTRE + LAD+A+A+DEED+ KFT V KE DS++PL
Sbjct: 267 LEKYQDLDPTFSGTRECKFLADLASAIDEEDIAKFTDVSKEIDSVSPL 314
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 488,369,563
Number of Sequences: 1393205
Number of extensions: 10021075
Number of successful extensions: 28366
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 24742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26897
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23711793746
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
