Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002956A_C04 KMC002956A_c04
(604 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM19711.1|AF499724_1 aluminum-induced protein-like protein [... 147 1e-34
ref|NP_199196.1| aluminum-induced protein-like; protein id: At5g... 145 4e-34
ref|NP_188925.1| unknown protein; protein id: At3g22850.1, suppo... 142 3e-33
pir||S41890 hypothetical protein - garden asparagus gi|452714|em... 113 2e-24
gb|AAG00940.1| unknown [Glycine max] 113 2e-24
>gb|AAM19711.1|AF499724_1 aluminum-induced protein-like protein [Thellungiella halophila]
Length = 251
Score = 147 bits (371), Expect = 1e-34
Identities = 65/90 (72%), Positives = 80/90 (88%)
Frame = -2
Query: 603 SSDDDGSVPFFWGTDADGNLVLSDETEIVAKSCGKSSAPFPKGCFFSTSGGLSSFEHPLN 424
+SD DGSVPFFWGTDA+G+LVL+D+TE+V K C KS +PFPKGCFF++SGGL S+EHP N
Sbjct: 147 ASDADGSVPFFWGTDAEGHLVLADDTEMVKKGCSKSYSPFPKGCFFTSSGGLRSYEHPKN 206
Query: 423 EMKAVPRVDSSGEMCGATFKVDADAKKETT 334
E+K VPRVDSSG++CGATFKVDA+ K+E T
Sbjct: 207 ELKPVPRVDSSGDVCGATFKVDAETKREPT 236
>ref|NP_199196.1| aluminum-induced protein-like; protein id: At5g43830.1, supported
by cDNA: 12484., supported by cDNA: gi_15028024
[Arabidopsis thaliana] gi|10177953|dbj|BAB11312.1|
aluminum-induced protein-like [Arabidopsis thaliana]
gi|15028025|gb|AAK76543.1| putative aluminum-induced
protein [Arabidopsis thaliana]
gi|21436085|gb|AAM51243.1| putative aluminum-induced
protein [Arabidopsis thaliana]
gi|21537246|gb|AAM61587.1| aluminum-induced protein-like
[Arabidopsis thaliana]
Length = 251
Score = 145 bits (366), Expect = 4e-34
Identities = 65/90 (72%), Positives = 77/90 (85%)
Frame = -2
Query: 603 SSDDDGSVPFFWGTDADGNLVLSDETEIVAKSCGKSSAPFPKGCFFSTSGGLSSFEHPLN 424
++D DGSVPFFWGTDA+G+LV SD TE+V K C KS PFPKGCFF++SGGL SFEHP N
Sbjct: 147 AADADGSVPFFWGTDAEGHLVFSDNTEMVKKGCAKSYGPFPKGCFFTSSGGLRSFEHPKN 206
Query: 423 EMKAVPRVDSSGEMCGATFKVDADAKKETT 334
E+K VPRVDSSG++CGATFKVDA+ K+E T
Sbjct: 207 ELKPVPRVDSSGDVCGATFKVDAETKREGT 236
>ref|NP_188925.1| unknown protein; protein id: At3g22850.1, supported by cDNA:
gi_18252900 [Arabidopsis thaliana]
gi|11994714|dbj|BAB03030.1| contains similarity to
unknown protein~gb|AAF35411.1~gene_id:F5N5.2
[Arabidopsis thaliana] gi|18252901|gb|AAL62377.1|
unknown protein [Arabidopsis thaliana]
gi|21387077|gb|AAM47942.1| unknown protein [Arabidopsis
thaliana]
Length = 248
Score = 142 bits (358), Expect = 3e-33
Identities = 63/88 (71%), Positives = 76/88 (85%)
Frame = -2
Query: 603 SSDDDGSVPFFWGTDADGNLVLSDETEIVAKSCGKSSAPFPKGCFFSTSGGLSSFEHPLN 424
+ D DGSVP +WGTDA+G+LV+SD+ E V K CGKS APFPKGCFF++SGGL S+EHP N
Sbjct: 146 AGDVDGSVPLYWGTDAEGHLVVSDDVETVKKGCGKSFAPFPKGCFFTSSGGLRSYEHPSN 205
Query: 423 EMKAVPRVDSSGEMCGATFKVDADAKKE 340
E+K VPRVDSSGE+CG TFKVD++AKKE
Sbjct: 206 ELKPVPRVDSSGEVCGVTFKVDSEAKKE 233
>pir||S41890 hypothetical protein - garden asparagus gi|452714|emb|CAA54526.1|
unknown [Asparagus officinalis]
Length = 259
Score = 113 bits (283), Expect = 2e-24
Identities = 50/85 (58%), Positives = 60/85 (69%)
Frame = -2
Query: 591 DGSVPFFWGTDADGNLVLSDETEIVAKSCGKSSAPFPKGCFFSTSGGLSSFEHPLNEMKA 412
DG VP FWG DG+ V+ D+ ++ CGKS APFP GC FS+ GGL SFE P+N+MKA
Sbjct: 157 DGRVPLFWGVACDGSAVICDDLNVMKSGCGKSFAPFPNGCMFSSEGGLKSFERPMNKMKA 216
Query: 411 VPRVDSSGEMCGATFKVDADAKKET 337
VPRVDS G MCG+ FKVD+ K T
Sbjct: 217 VPRVDSEGTMCGSFFKVDSCTKIST 241
>gb|AAG00940.1| unknown [Glycine max]
Length = 256
Score = 113 bits (282), Expect = 2e-24
Identities = 48/82 (58%), Positives = 62/82 (75%)
Frame = -2
Query: 591 DGSVPFFWGTDADGNLVLSDETEIVAKSCGKSSAPFPKGCFFSTSGGLSSFEHPLNEMKA 412
DG V +WG ADG++V+SD+ E++ + C KS APFP GC F + GGL SFEHP+N++KA
Sbjct: 156 DGGVKLYWGIAADGSVVISDDLEVIKEGCAKSFAPFPTGCMFHSEGGLMSFEHPMNKLKA 215
Query: 411 VPRVDSSGEMCGATFKVDADAK 346
+PRVDS G MCGA FKVD A+
Sbjct: 216 MPRVDSEGAMCGANFKVDKFAR 237
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 481,569,246
Number of Sequences: 1393205
Number of extensions: 9464011
Number of successful extensions: 26059
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 24076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25731
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23711793746
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
