Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002935A_C01 KMC002935A_c01
(598 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_197094.1| putative protein; protein id: At5g15900.1 [Arab... 183 2e-45
ref|NP_197093.1| putative protein; protein id: At5g15890.1 [Arab... 172 3e-42
dbj|BAB86576.1| OSJNBb0032K15.17 [Oryza sativa (japonica cultiva... 166 3e-40
dbj|BAB86580.1| OSJNBb0032K15.21 [Oryza sativa (japonica cultiva... 165 5e-40
dbj|BAC20615.1| contains ESTs AU089699(E3862),AU089700(E3862)~si... 148 6e-35
>ref|NP_197094.1| putative protein; protein id: At5g15900.1 [Arabidopsis thaliana]
gi|11357577|pir||T51373 hypothetical protein F1N13_40 -
Arabidopsis thaliana gi|9755636|emb|CAC01789.1| putative
protein [Arabidopsis thaliana]
Length = 426
Score = 183 bits (464), Expect = 2e-45
Identities = 84/126 (66%), Positives = 102/126 (80%)
Frame = -2
Query: 597 NFKGITFLRTFSPSHFENGIWNEGGNCVRTKPFRSNETQLEGLNLEYYMIQLEEFKIAEK 418
+FKG+ +LR+F+PSHFE G+WNEGG+C+R +P+RSNETQ E ++ + IQLEEF AE+
Sbjct: 288 SFKGVMYLRSFAPSHFEGGLWNEGGDCLRKQPYRSNETQDE-TTMKLHKIQLEEFWRAEE 346
Query: 417 EARKKGLRYRLFDTMQATLLRPDGHPSKYGHWPNENVTLYNDCVHWCLPGPIDTWSDFLL 238
EA+KKG R RL DT QA LRPDGHPS+YGH P NVTLYNDCVHWCLPGPID +DFLL
Sbjct: 347 EAKKKGKRLRLLDTTQAMWLRPDGHPSRYGHIPEANVTLYNDCVHWCLPGPIDNLNDFLL 406
Query: 237 DLLKME 220
+LK E
Sbjct: 407 AMLKRE 412
>ref|NP_197093.1| putative protein; protein id: At5g15890.1 [Arabidopsis thaliana]
gi|11357576|pir||T51372 hypothetical protein F1N13_30 -
Arabidopsis thaliana gi|9755635|emb|CAC01788.1| putative
protein [Arabidopsis thaliana]
Length = 526
Score = 172 bits (436), Expect = 3e-42
Identities = 80/127 (62%), Positives = 98/127 (76%), Gaps = 1/127 (0%)
Frame = -2
Query: 597 NFKGITFLRTFSPSHFENGIWNEGGNCVRTKPFRSNETQLEGLNLEYYMIQLEEFKIAEK 418
NFKG+ FLR+FSP HFE G WNEGG+CVRT+P+R NET E +L+ + IQ EEF+ AE+
Sbjct: 400 NFKGLAFLRSFSPQHFEGGAWNEGGDCVRTQPYRRNETIPEA-DLKVHDIQREEFRAAEE 458
Query: 417 EARKK-GLRYRLFDTMQATLLRPDGHPSKYGHWPNENVTLYNDCVHWCLPGPIDTWSDFL 241
+ KK GLR +L DT QA LLRPDGHP +YGH N NVTL NDC+HWCLPGPIDT +D L
Sbjct: 459 DGMKKSGLRLKLMDTTQAMLLRPDGHPGRYGHLQNPNVTLRNDCIHWCLPGPIDTLNDIL 518
Query: 240 LDLLKME 220
L ++K +
Sbjct: 519 LQMMKTD 525
>dbj|BAB86576.1| OSJNBb0032K15.17 [Oryza sativa (japonica cultivar-group)]
gi|20161502|dbj|BAB90425.1| OSJNBb0006H05.2 [Oryza
sativa (japonica cultivar-group)]
Length = 404
Score = 166 bits (419), Expect = 3e-40
Identities = 72/124 (58%), Positives = 90/124 (72%), Gaps = 1/124 (0%)
Frame = -2
Query: 597 NFKGITFLRTFSP-SHFENGIWNEGGNCVRTKPFRSNETQLEGLNLEYYMIQLEEFKIAE 421
+ +G +R SP SHFENG W++GGNC RT+P RSNET +EG +L +Y Q+EE++ AE
Sbjct: 279 SLRGRVIVRMLSPMSHFENGTWDQGGNCKRTQPLRSNETVMEGRDLHFYTAQMEEYRAAE 338
Query: 420 KEARKKGLRYRLFDTMQATLLRPDGHPSKYGHWPNENVTLYNDCVHWCLPGPIDTWSDFL 241
K A KG R L D A L+RPDGHPS+YGH PN+ V LYNDC+HWCLPGPID W+D L
Sbjct: 339 KVAEAKGRRMMLMDATAAMLMRPDGHPSRYGHLPNQKVQLYNDCIHWCLPGPIDIWNDML 398
Query: 240 LDLL 229
+L
Sbjct: 399 FQML 402
>dbj|BAB86580.1| OSJNBb0032K15.21 [Oryza sativa (japonica cultivar-group)]
gi|20161506|dbj|BAB90429.1| OSJNBb0006H05.6 [Oryza
sativa (japonica cultivar-group)]
Length = 393
Score = 165 bits (417), Expect = 5e-40
Identities = 70/123 (56%), Positives = 92/123 (73%), Gaps = 1/123 (0%)
Frame = -2
Query: 594 FKGITFLRTFSP-SHFENGIWNEGGNCVRTKPFRSNETQLEGLNLEYYMIQLEEFKIAEK 418
F+G +RT SP SHFE G W++GG+C RT+P+R NET + G++LE+Y Q+EEF+ A++
Sbjct: 269 FRGKAIVRTLSPMSHFEGGAWDKGGDCRRTRPYRGNETAMGGMDLEFYTSQVEEFREAQR 328
Query: 417 EARKKGLRYRLFDTMQATLLRPDGHPSKYGHWPNENVTLYNDCVHWCLPGPIDTWSDFLL 238
EA G+ L D A LLRPDGHPS+YGHWP+E LYNDC+HWCLPGP+D W+D LL
Sbjct: 329 EAAANGVDMVLMDPTAAMLLRPDGHPSRYGHWPDEKRVLYNDCIHWCLPGPVDAWNDMLL 388
Query: 237 DLL 229
+L
Sbjct: 389 HML 391
>dbj|BAC20615.1| contains ESTs AU089699(E3862),AU089700(E3862)~similar to Oryza
sativa chromosome 1, OSJNBb0032K15.17~unknown protein
[Oryza sativa (japonica cultivar-group)]
Length = 406
Score = 148 bits (373), Expect = 6e-35
Identities = 65/125 (52%), Positives = 89/125 (71%), Gaps = 3/125 (2%)
Frame = -2
Query: 594 FKGITFLRTFSP-SHFENGIWNEGGNCVRTKPFRSNETQLEGLNLEYYMIQLEEFKIAEK 418
F G +RT SP SHFE G W++GG+C RT+P ++E ++ GL+++++ Q+EEF+ AE
Sbjct: 277 FNGTVIVRTLSPTSHFEGGEWDKGGDCRRTRPTAASEARMSGLDVDFHAAQVEEFRRAEA 336
Query: 417 EARKKG--LRYRLFDTMQATLLRPDGHPSKYGHWPNENVTLYNDCVHWCLPGPIDTWSDF 244
A G +R L D A + R DGHPS+YGHW +ENVTLYNDCVHWCLPGP+D W++
Sbjct: 337 AAAASGSAVRMLLMDATAAMVARADGHPSRYGHWAHENVTLYNDCVHWCLPGPVDVWNEM 396
Query: 243 LLDLL 229
LL +L
Sbjct: 397 LLQML 401
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 481,533,908
Number of Sequences: 1393205
Number of extensions: 9859064
Number of successful extensions: 23367
Number of sequences better than 10.0: 109
Number of HSP's better than 10.0 without gapping: 22597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23265
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23140425222
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
