Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002932A_C01 KMC002932A_c01
(615 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195825.1| putative protein; protein id: At5g02050.1, supp... 122 5e-27
gb|AAM64272.1| unknown [Arabidopsis thaliana] 120 1e-26
dbj|BAB16464.1| P0019D06.23 [Oryza sativa (japonica cultivar-gro... 119 4e-26
ref|NP_567025.1| Expressed protein; protein id: At3g55605.1, sup... 117 2e-25
pir||T47699 hypothetical protein F1I16.10 - Arabidopsis thaliana... 117 2e-25
>ref|NP_195825.1| putative protein; protein id: At5g02050.1, supported by cDNA:
22324. [Arabidopsis thaliana] gi|11358397|pir||T48226
hypothetical protein T7H20.100 - Arabidopsis thaliana
gi|7340679|emb|CAB82978.1| putative protein [Arabidopsis
thaliana]
Length = 267
Score = 122 bits (305), Expect = 5e-27
Identities = 55/79 (69%), Positives = 69/79 (86%)
Frame = -2
Query: 614 DEIVIDSLSVKNPELSEDQIAYEGPDFQDLDESLQKSFHKYLEIRGIKPSTTNFLHEYMI 435
DEIVIDSLS+K P+ S++ +AYEGPDF DLDE+LQK+FH+YLEIRGIKPS T FL +Y+
Sbjct: 188 DEIVIDSLSIKQPQGSDNDLAYEGPDFDDLDENLQKAFHRYLEIRGIKPSFTTFLADYVA 247
Query: 434 NKDSKEYLVWLKKVKSFIQ 378
NKDS+EYL WLK +KSF++
Sbjct: 248 NKDSREYLQWLKDLKSFVE 266
>gb|AAM64272.1| unknown [Arabidopsis thaliana]
Length = 267
Score = 120 bits (301), Expect = 1e-26
Identities = 54/79 (68%), Positives = 68/79 (85%)
Frame = -2
Query: 614 DEIVIDSLSVKNPELSEDQIAYEGPDFQDLDESLQKSFHKYLEIRGIKPSTTNFLHEYMI 435
DEIV DSLS+K P+ S++ +AYEGPDF DLDE+LQK+FH+YLEIRGIKPS T FL +Y+
Sbjct: 188 DEIVFDSLSIKQPQGSDNDLAYEGPDFDDLDENLQKAFHRYLEIRGIKPSFTTFLADYVA 247
Query: 434 NKDSKEYLVWLKKVKSFIQ 378
NKDS+EYL WLK +KSF++
Sbjct: 248 NKDSREYLQWLKDLKSFVE 266
>dbj|BAB16464.1| P0019D06.23 [Oryza sativa (japonica cultivar-group)]
gi|13486890|dbj|BAB40119.1| P0024G09.11 [Oryza sativa
(japonica cultivar-group)]
Length = 264
Score = 119 bits (297), Expect = 4e-26
Identities = 54/80 (67%), Positives = 68/80 (84%), Gaps = 1/80 (1%)
Frame = -2
Query: 614 DEIVIDSLSVKNPELSEDQ-IAYEGPDFQDLDESLQKSFHKYLEIRGIKPSTTNFLHEYM 438
DEI+ID+LSV E ED+ I YEGPDF DLDE+LQ++FHKYLE+RGI P TNFLHEYM
Sbjct: 184 DEILIDALSVMPSESGEDEMITYEGPDFNDLDENLQRAFHKYLEMRGITPMATNFLHEYM 243
Query: 437 INKDSKEYLVWLKKVKSFIQ 378
INKDS+EYL+WL+++K F++
Sbjct: 244 INKDSREYLIWLRRLKDFVR 263
>ref|NP_567025.1| Expressed protein; protein id: At3g55605.1, supported by cDNA:
250217. [Arabidopsis thaliana]
gi|21554314|gb|AAM63419.1| unknown [Arabidopsis
thaliana]
Length = 258
Score = 117 bits (292), Expect = 2e-25
Identities = 53/80 (66%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
Frame = -2
Query: 614 DEIVIDSLSVKNPE-LSEDQIAYEGPDFQDLDESLQKSFHKYLEIRGIKPSTTNFLHEYM 438
DEIVID LSV P+ SE+Q+ Y+GPDFQ+LDE+++KSFHK+LE RGIK S T+FL+EYM
Sbjct: 178 DEIVIDGLSVNRPDDSSEEQLTYDGPDFQELDENMRKSFHKFLETRGIKASATDFLYEYM 237
Query: 437 INKDSKEYLVWLKKVKSFIQ 378
+ KDS+EYL+WLKK+K+F+Q
Sbjct: 238 MKKDSREYLLWLKKLKTFVQ 257
>pir||T47699 hypothetical protein F1I16.10 - Arabidopsis thaliana
gi|7263548|emb|CAB81585.1| putative protein [Arabidopsis
thaliana]
Length = 474
Score = 117 bits (292), Expect = 2e-25
Identities = 53/80 (66%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
Frame = -2
Query: 614 DEIVIDSLSVKNPE-LSEDQIAYEGPDFQDLDESLQKSFHKYLEIRGIKPSTTNFLHEYM 438
DEIVID LSV P+ SE+Q+ Y+GPDFQ+LDE+++KSFHK+LE RGIK S T+FL+EYM
Sbjct: 394 DEIVIDGLSVNRPDDSSEEQLTYDGPDFQELDENMRKSFHKFLETRGIKASATDFLYEYM 453
Query: 437 INKDSKEYLVWLKKVKSFIQ 378
+ KDS+EYL+WLKK+K+F+Q
Sbjct: 454 MKKDSREYLLWLKKLKTFVQ 473
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 473,790,620
Number of Sequences: 1393205
Number of extensions: 9351391
Number of successful extensions: 20264
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 19824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20256
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24854530794
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
