>KMC002930A_C03 KMC002930A_c03
tgataaatgaatttcatgatgaccatatatgtacGATTCTCATTTATATTGAGAGTAAAA
AGGAAAGGCAATAAAGAAATCTACAGAGAATCCCATGAGATATTTTTGAACCTCTAAGCC
ATGCAAGACACCAGTATACTTGACCTGTTGACCAGTCCAACTTTGTTACCAAAGTAAACT
TTCATGATATTTTCAAAAGCATGCAGAATAAGCAAACTGTCTGAACCCACTTGGTGACTC
TTCCCAACAACCCTCTTGAAATCTAGTATCTTACTTTGTTTCCCATTTACATTCTCAACC
TTAAGCAAATAATGAAAACCATAAAACATACTTTGGGCAACCCCATTTAAATGCGAAACC
ATAAATAAACACTAAATATAAGTAAAAATAGATACTTAATGGCATAAAGGAGCAAGGCAT
GTGCATCTTCTGCAATGGTGAATGGTTGAATGCTATTTTAGAAAGATAATAAAAAGCCAT
TAACAATGAAAATTTAAACAATGTAGATGAGCAGAAAGGGTTAATCAAGATTTTGACTGA
TTCACCCGTTTAAACATCTCTTATTGTGCAGATTTCATCATCTAAAACCTCATGTGTGAT
AAAGAATCAGCACCTGATGAAACATAGGGCTCATCCACAGTAAAAATACACACACGGTTG
ATGAGAAAAGGAATAGTCTAATACATGATTCAGATTTTAACATATGAAAAATAAAGAGCT
TGGAGCAATGGTGCTTACAAACATATGTCTTGATAAAAGAAAGTTTATCTCATCCATCTG
GGATCTGGATTCACTGCATTCAGTACTCACTGCAGTCACTTGATTCAGCCAATCTCTCCA
CCCTTGGGTTTATCTCCAAGAAATTTGTCATGCCTGCATTACACACTCGGGCTCGCCCAC
CAGCCCCTTCAAGCTGCTTCCGCCGCCTCACAAGATCCAAGGGAAATGTTACTGCAGATA
GGAAAACAGATGAATTGAACCATAATCATTCTAGTCAAAAGACATTCACATGGGATTGAG
ATTGTATTAAACCTTAGATTATTAATATTTTGTGTCATGCATCATCAAATATGGTAAAGT
AACAAATGGGCTGAAATG

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC002930A_C03 KMC002930A_c03
         (1098 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T45934 hypothetical protein F5K20.240 - Arabidopsis thalian...    50  6e-05
ref|NP_190962.2| mitochondrial carrier protein family; protein i...    50  6e-05
gb|AAM91520.1| putative mitochondrial carrier protein [Arabidops...    49  2e-04
ref|NP_191123.1| mitochondrial carrier protein family; protein i...    48  3e-04
ref|NP_181325.1| mitochondrial carrier protein family; protein i...    47  5e-04

>pir||T45934 hypothetical protein F5K20.240 - Arabidopsis thaliana
           gi|7630014|emb|CAB88356.1| putative protein [Arabidopsis
           thaliana]
          Length = 358

 Score = 50.1 bits (118), Expect = 6e-05
 Identities = 24/35 (68%), Positives = 26/35 (73%)
 Frame = -3

Query: 973 SSVFLSAVTFPLDLVRRRKQLEGAGGRARVCNAGM 869
           S +  S  TFPLDLVRRR QLEGAGGRARV   G+
Sbjct: 274 SGIVSSTATFPLDLVRRRMQLEGAGGRARVYTTGL 308

>ref|NP_190962.2| mitochondrial carrier protein family; protein id: At3g53940.1,
           supported by cDNA: gi_17064803, supported by cDNA:
           gi_20259827 [Arabidopsis thaliana]
           gi|17064804|gb|AAL32556.1| putative protein [Arabidopsis
           thaliana] gi|20259828|gb|AAM13261.1| putative protein
           [Arabidopsis thaliana]
          Length = 365

 Score = 50.1 bits (118), Expect = 6e-05
 Identities = 24/35 (68%), Positives = 26/35 (73%)
 Frame = -3

Query: 973 SSVFLSAVTFPLDLVRRRKQLEGAGGRARVCNAGM 869
           S +  S  TFPLDLVRRR QLEGAGGRARV   G+
Sbjct: 281 SGIVSSTATFPLDLVRRRMQLEGAGGRARVYTTGL 315

>gb|AAM91520.1| putative mitochondrial carrier protein [Arabidopsis thaliana]
           gi|23197668|gb|AAN15361.1| putative mitochondrial
           carrier protein [Arabidopsis thaliana]
          Length = 337

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 22/30 (73%), Positives = 25/30 (83%)
 Frame = -3

Query: 958 SAVTFPLDLVRRRKQLEGAGGRARVCNAGM 869
           S  T+PLDLVRRR Q+EGAGGRARV N G+
Sbjct: 258 STATYPLDLVRRRMQVEGAGGRARVYNTGL 287

>ref|NP_191123.1| mitochondrial carrier protein family; protein id: At3g55640.1,
           supported by cDNA: 260615., supported by cDNA:
           gi_13877984, supported by cDNA: gi_17104714 [Arabidopsis
           thaliana] gi|11277065|pir||T47703 Ca-dependent solute
           carrier-like protein - Arabidopsis thaliana
           gi|7263552|emb|CAB81589.1| Ca-dependent solute
           carrier-like protein [Arabidopsis thaliana]
           gi|13877985|gb|AAK44070.1|AF370255_1 putative
           Ca-dependent solute carrier protein [Arabidopsis
           thaliana] gi|17104715|gb|AAL34246.1| putative
           Ca-dependent solute carrier protein [Arabidopsis
           thaliana]
          Length = 332

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 24/40 (60%), Positives = 27/40 (67%)
 Frame = -3

Query: 973 SSVFLSAVTFPLDLVRRRKQLEGAGGRARVCNAGMTNFLE 854
           S +  S  TFPLDLVRRRKQLEG GGRA V   G+   L+
Sbjct: 246 SGIASSTATFPLDLVRRRKQLEGIGGRAVVYKTGLLGTLK 285

>ref|NP_181325.1| mitochondrial carrier protein family; protein id: At2g37890.1
           [Arabidopsis thaliana] gi|25295875|pir||D84798 probable
           mitochondrial carrier protein [imported] - Arabidopsis
           thaliana
          Length = 348

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 21/27 (77%), Positives = 24/27 (88%)
 Frame = -3

Query: 949 TFPLDLVRRRKQLEGAGGRARVCNAGM 869
           T+PLDLVRRR Q+EGAGGRARV N G+
Sbjct: 272 TYPLDLVRRRMQVEGAGGRARVYNTGL 298

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 920,032,755
Number of Sequences: 1393205
Number of extensions: 20379221
Number of successful extensions: 45038
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 42867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45022
length of database: 448,689,247
effective HSP length: 125
effective length of database: 274,538,622
effective search space used: 65889269280
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MFBL043f07_f BP043456 1 562 2 SPDL049g01_f BP055097 35 521 3 GNf006f11 BP067825 408 916 4 SPDL075h04_f BP056670 422 921 5 MPDL027d07_f AV777852 509 1104 6 SPD074f10_f BP049928 509 964 7 GNf086g04 BP073738 510 1031 8 MPD018c05_f AV771227 560 1048

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