Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002920A_C01 KMC002920A_c01
(721 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM62833.1| putative zinc finger protein [Arabidopsis thaliana] 99 5e-20
gb|AAK62595.1| At1g30970/F17F8_14 [Arabidopsis thaliana] 99 5e-20
ref|NP_564369.1| putative zinc finger protein; protein id: At1g3... 99 5e-20
gb|AAF98186.1|AC000107_9 F17F8.14 [Arabidopsis thaliana] 91 1e-17
ref|NP_701405.1| hypothetical protein [Plasmodium falciparum 3D7... 32 8.9
>gb|AAM62833.1| putative zinc finger protein [Arabidopsis thaliana]
Length = 367
Score = 99.4 bits (246), Expect = 5e-20
Identities = 48/54 (88%), Positives = 53/54 (97%)
Frame = -1
Query: 721 EVYLVWDDEAMSMEERRMSLPKYQVHDESSQMSSIDAAIDKRILESRLAGRMAF 560
EVYLVWDDEAMSMEERRMSLPKY+VHDE+SQM+SI+AAID+RI ESRLAGRMAF
Sbjct: 314 EVYLVWDDEAMSMEERRMSLPKYKVHDETSQMNSINAAIDRRISESRLAGRMAF 367
>gb|AAK62595.1| At1g30970/F17F8_14 [Arabidopsis thaliana]
Length = 367
Score = 99.4 bits (246), Expect = 5e-20
Identities = 48/54 (88%), Positives = 53/54 (97%)
Frame = -1
Query: 721 EVYLVWDDEAMSMEERRMSLPKYQVHDESSQMSSIDAAIDKRILESRLAGRMAF 560
EVYLVWDDEAMSMEERRMSLPKY+VHDE+SQM+SI+AAID+RI ESRLAGRMAF
Sbjct: 314 EVYLVWDDEAMSMEERRMSLPKYKVHDETSQMNSINAAIDRRISESRLAGRMAF 367
>ref|NP_564369.1| putative zinc finger protein; protein id: At1g30970.1, supported by
cDNA: 16162., supported by cDNA: gi_13430729, supported
by cDNA: gi_14517409, supported by cDNA: gi_15293210
[Arabidopsis thaliana]
gi|13430730|gb|AAK25987.1|AF360277_1 putative zinc
finger protein [Arabidopsis thaliana]
gi|15293211|gb|AAK93716.1| putative zinc finger protein
[Arabidopsis thaliana]
Length = 367
Score = 99.4 bits (246), Expect = 5e-20
Identities = 48/54 (88%), Positives = 53/54 (97%)
Frame = -1
Query: 721 EVYLVWDDEAMSMEERRMSLPKYQVHDESSQMSSIDAAIDKRILESRLAGRMAF 560
EVYLVWDDEAMSMEERRMSLPKY+VHDE+SQM+SI+AAID+RI ESRLAGRMAF
Sbjct: 314 EVYLVWDDEAMSMEERRMSLPKYKVHDETSQMNSINAAIDRRISESRLAGRMAF 367
>gb|AAF98186.1|AC000107_9 F17F8.14 [Arabidopsis thaliana]
Length = 381
Score = 91.3 bits (225), Expect = 1e-17
Identities = 48/64 (75%), Positives = 53/64 (82%), Gaps = 10/64 (15%)
Frame = -1
Query: 721 EVYLVWDDEAMSMEERRMSLPKYQVHDESSQ----------MSSIDAAIDKRILESRLAG 572
EVYLVWDDEAMSMEERRMSLPKY+VHDE+SQ M+SI+AAID+RI ESRLAG
Sbjct: 318 EVYLVWDDEAMSMEERRMSLPKYKVHDETSQLAIVGSEKHSMNSINAAIDRRISESRLAG 377
Query: 571 RMAF 560
RMAF
Sbjct: 378 RMAF 381
>ref|NP_701405.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23496571|gb|AAN36129.1|AE014844_40 hypothetical
protein [Plasmodium falciparum 3D7]
Length = 1089
Score = 32.0 bits (71), Expect = 8.9
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1
Query: 136 NNTNDEEQRNAVNFVSQRHKTCRLHQMVMKYHVLKD*LKTSKGEKVREKERNK 294
N TN Q N ++ + H+T +HQ +H+L D S ++R+ +R +
Sbjct: 579 NETNQIHQTNHIHQTNHIHQTNHIHQTNHIHHILDDKDNLSNTRRIRQLKRRR 631
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 617,948,956
Number of Sequences: 1393205
Number of extensions: 13286350
Number of successful extensions: 32674
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 31563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32646
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 33499052993
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
