Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002893A_C01 KMC002893A_c01
(948 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAN03468.1| bZIP transcription factor ATB2 [Glycine max] 162 9e-39
emb|CAC00658.1| common plant regulatory factor 7 [Petroselinum c... 140 3e-32
gb|AAK92213.1| bZIP transcription factor BZI-2 [Nicotiana tabacum] 137 2e-31
gb|AAD21199.1| putative bZIP DNA-binding protein [Capsicum chine... 137 2e-31
gb|AAN61914.1|AF430372_1 bZIP transcription factor [Capsicum chi... 135 7e-31
>gb|AAN03468.1| bZIP transcription factor ATB2 [Glycine max]
Length = 166
Score = 162 bits (409), Expect = 9e-39
Identities = 91/155 (58%), Positives = 109/155 (69%), Gaps = 14/155 (9%)
Frame = -3
Query: 937 QSSGSEGDLQMVM-DQRKNKRKQSNRESARRSRMRKQSHLEDLTSQVTQLTKENGEILTN 761
Q+SGSE DLQ +M DQRK KR SNRESARRSRMRKQ HL+DL SQV QL KEN +ILT+
Sbjct: 16 QNSGSEEDLQAMMEDQRKRKRMISNRESARRSRMRKQKHLDDLVSQVAQLRKENQQILTS 75
Query: 760 INITSQQYQNVETENSILRAQMGELSQRLQSLNDIINVIKTSAAATTTTTG--------- 608
+NIT+QQY +VE ENS+LRAQ+GELS RL+SLN+I++V+ ATTT G
Sbjct: 76 VNITTQQYLSVEAENSVLRAQVGELSHRLESLNEIVDVLN----ATTTVAGFGAAASSTF 131
Query: 607 ----SYNEREFYQTGALNFSYLNQPITASADIFQW 515
+ N F+ LN YLNQPI ASADI Q+
Sbjct: 132 VEPMNNNNNSFFNFNPLNMGYLNQPIMASADILQY 166
>emb|CAC00658.1| common plant regulatory factor 7 [Petroselinum crispum]
Length = 174
Score = 140 bits (353), Expect = 3e-32
Identities = 84/166 (50%), Positives = 102/166 (60%), Gaps = 23/166 (13%)
Frame = -3
Query: 943 KFQSSGSEGDLQMVMDQRKNKRKQSNRESARRSRMRKQSHLEDLTSQVTQLTKENGEILT 764
K Q+SGSEGDL MDQRK KR QSNRESARRSR RKQ+HL++L +Q QL KEN +I+T
Sbjct: 14 KLQNSGSEGDL---MDQRKRKRMQSNRESARRSRQRKQNHLDELMAQAAQLRKENNQIIT 70
Query: 763 NINITSQQYQNVETENSILRAQMGELSQRLQSLNDIINVIKT-----SAAATTTTTG--- 608
N+T+QQ+ VE ENS+LRAQM EL+QRLQSLNDI++ I T +AA TTG
Sbjct: 71 TTNLTTQQFVKVEAENSVLRAQMDELTQRLQSLNDILHYINTTTTAAAAATAAATTGIDG 130
Query: 607 ---------------SYNEREFYQTGALNFSYLNQPITASADIFQW 515
SY + N Y NQPI AD+F +
Sbjct: 131 VFEMDNLFGLDDHQSSYMNNNNNNNNSWNMMYPNQPI--MADMFMY 174
>gb|AAK92213.1| bZIP transcription factor BZI-2 [Nicotiana tabacum]
Length = 170
Score = 137 bits (346), Expect = 2e-31
Identities = 77/156 (49%), Positives = 100/156 (63%), Gaps = 15/156 (9%)
Frame = -3
Query: 937 QSSGSEGDLQMVMDQRKNKRKQSNRESARRSRMRKQSHLEDLTSQVTQLTKENGEILTNI 758
Q+SGSE DLQ ++DQRK KR SNRESARRSRMRKQ HL+DL +QV L KEN +ILT++
Sbjct: 16 QNSGSEEDLQQLVDQRKRKRMISNRESARRSRMRKQKHLDDLMAQVATLRKENNQILTSM 75
Query: 757 NITSQQYQNVETENSILRAQMGELSQRLQSLNDIINVIKTSAAATTTTTGSYNERE---- 590
N+T+Q Y NVE ENSILRAQ+ EL+ RL+SLN+II + + +N+ E
Sbjct: 76 NVTTQHYLNVEAENSILRAQLAELNHRLESLNEIIAFLDANNNCNGLANMDHNQEEPYSF 135
Query: 589 -----------FYQTGALNFSYLNQPITASADIFQW 515
F T + N+ NQPI +AD+ Q+
Sbjct: 136 NFAQNEPMVDGFNMTNSWNYLCANQPI-MTADVLQY 170
>gb|AAD21199.1| putative bZIP DNA-binding protein [Capsicum chinense]
Length = 167
Score = 137 bits (346), Expect = 2e-31
Identities = 78/154 (50%), Positives = 102/154 (65%), Gaps = 13/154 (8%)
Frame = -3
Query: 937 QSSGSEGDLQMVMDQRKNKRKQSNRESARRSRMRKQSHLEDLTSQVTQLTKENGEILTNI 758
Q+SGSE DLQ++MDQRK KR SNRESARRSRMRKQ HL+DL +QV+ L KEN +ILT++
Sbjct: 15 QNSGSEEDLQLLMDQRKRKRMISNRESARRSRMRKQKHLDDLMAQVSTLRKENDQILTSM 74
Query: 757 NITSQQYQNVETENSILRAQMGELSQRLQSLNDIINVIKTSAAATTTTTGSYNE------ 596
N+T+Q Y NVE ENSILRAQ+ ELS RL+SLN+II + + + + +NE
Sbjct: 75 NVTTQHYLNVEAENSILRAQLSELSHRLESLNEIIAYMDANNSCSNGLAMDHNEPYSFNF 134
Query: 595 -------REFYQTGALNFSYLNQPITASADIFQW 515
F T + N+ NQPI +A + Q+
Sbjct: 135 AQSDTVVDGFNMTNSWNYFCSNQPI-MTAHVLQY 167
>gb|AAN61914.1|AF430372_1 bZIP transcription factor [Capsicum chinense]
Length = 170
Score = 135 bits (341), Expect = 7e-31
Identities = 79/157 (50%), Positives = 104/157 (65%), Gaps = 16/157 (10%)
Frame = -3
Query: 937 QSSGSEGDLQMVMDQRKNKRKQSNRESARRSRMRKQSHLEDLTSQVTQLTKENGEILTNI 758
Q+SGSE DLQ++MDQRK KR SNRESARRSRMRKQ HL+DL +QV+ L KEN +ILT++
Sbjct: 15 QNSGSEEDLQLLMDQRKRKRMISNRESARRSRMRKQKHLDDLMAQVSTLRKENDQILTSM 74
Query: 757 NITSQQYQNVETENSILRAQMGELSQRLQSLNDIINVIKTSAAATTTTTG---------S 605
N+T+Q Y NVE ENSILRAQ+ ELS RL+SLN+II + + + + G S
Sbjct: 75 NVTTQHYLNVEAENSILRAQLSELSHRLESLNEIIAYMDANNNNNSCSNGLAMDHNEPYS 134
Query: 604 YNERE-------FYQTGALNFSYLNQPITASADIFQW 515
+N + F T + N+ NQPI +A + Q+
Sbjct: 135 FNFAQSDTVVDGFNMTNSWNYFCSNQPI-MTAHVLQY 170
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 830,760,357
Number of Sequences: 1393205
Number of extensions: 19329169
Number of successful extensions: 122867
Number of sequences better than 10.0: 453
Number of HSP's better than 10.0 without gapping: 66609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 105105
length of database: 448,689,247
effective HSP length: 123
effective length of database: 277,325,032
effective search space used: 53246406144
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
