Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002890A_C01 KMC002890A_c01
(564 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_197012.1| serine/threonine specific protein kinase -like;... 89 3e-17
dbj|BAC57958.1| serine/threonine protein kinase [Aster tripolium] 89 5e-17
gb|AAM64595.1| putative protein kinase [Arabidopsis thaliana] 88 6e-17
gb|AAL14379.1| AT3g01300/T22N4_7 [Arabidopsis thaliana] 88 6e-17
ref|NP_186779.1| putative protein kinase; protein id: At3g01300.... 88 6e-17
>ref|NP_197012.1| serine/threonine specific protein kinase -like; protein id:
At5g15080.1, supported by cDNA: gi_17064887 [Arabidopsis
thaliana] gi|11358839|pir||T51453 serine/threonine
specific protein kinase-like - Arabidopsis thaliana
gi|9755675|emb|CAC01827.1| serine/threonine specific
protein kinase-like [Arabidopsis thaliana]
gi|17064888|gb|AAL32598.1| serine/threonine specific
protein kinase-like [Arabidopsis thaliana]
gi|27311943|gb|AAO00937.1| serine/threonine specific
protein kinase-like [Arabidopsis thaliana]
Length = 493
Score = 89.4 bits (220), Expect = 3e-17
Identities = 56/92 (60%), Positives = 64/92 (68%), Gaps = 3/92 (3%)
Frame = -1
Query: 564 SRDPKARPLMSEVVEALKPLPSLKDMASSSYYFQTMPAERFRASPNTRSTPTQGSLLTRN 385
SRDPK RP MS+VVEALKPLP LKDMASSSYYFQTM AER + S +QG +RN
Sbjct: 406 SRDPKIRPKMSDVVEALKPLPHLKDMASSSYYFQTMQAERLK----NGSGRSQG-FGSRN 460
Query: 384 GQQR---RSLSMANGTHASPYHHQFPPLSPKP 298
GQ + R+LS +G +SPY HQ P SPKP
Sbjct: 461 GQHQPVFRTLSSPHG--SSPYRHQIP--SPKP 488
>dbj|BAC57958.1| serine/threonine protein kinase [Aster tripolium]
Length = 439
Score = 88.6 bits (218), Expect = 5e-17
Identities = 50/92 (54%), Positives = 60/92 (64%)
Frame = -1
Query: 564 SRDPKARPLMSEVVEALKPLPSLKDMASSSYYFQTMPAERFRASPNTRSTPTQGSLLTRN 385
SRDPKARPLMSEVV+ LKPLP+LKDMA SYY QT+ ER +SP+ T GS
Sbjct: 351 SRDPKARPLMSEVVDCLKPLPALKDMAGPSYYLQTVQPERAGSSPDPNRTRV-GSFSRNG 409
Query: 384 GQQRRSLSMANGTHASPYHHQFPPLSPKPHSQ 289
Q R+LS+ N ASP H+QF SP P+ +
Sbjct: 410 SQHPRTLSIPN---ASPRHNQFLQDSPNPNGK 438
>gb|AAM64595.1| putative protein kinase [Arabidopsis thaliana]
Length = 482
Score = 88.2 bits (217), Expect = 6e-17
Identities = 55/91 (60%), Positives = 61/91 (66%), Gaps = 2/91 (2%)
Frame = -1
Query: 564 SRDPKARPLMSEVVEALKPLPSLKDMASSSYYFQTMPAERFRASPNTRSTPTQGSLLTRN 385
SRD K RP MSEVVE LKPLP LKDMAS+SYYFQTM AER +A + S GS RN
Sbjct: 392 SRDSKIRPKMSEVVEVLKPLPHLKDMASASYYFQTMQAERLKAGSGSGSGRGFGS---RN 448
Query: 384 GQQ-RRSLSMANG-THASPYHHQFPPLSPKP 298
GQ R+LS +G +SPY HQ P SPKP
Sbjct: 449 GQPVFRTLSSPHGQAGSSPYRHQIP--SPKP 477
>gb|AAL14379.1| AT3g01300/T22N4_7 [Arabidopsis thaliana]
Length = 184
Score = 88.2 bits (217), Expect = 6e-17
Identities = 55/91 (60%), Positives = 61/91 (66%), Gaps = 2/91 (2%)
Frame = -1
Query: 564 SRDPKARPLMSEVVEALKPLPSLKDMASSSYYFQTMPAERFRASPNTRSTPTQGSLLTRN 385
SRD K RP MSEVVE LKPLP LKDMAS+SYYFQTM AER +A + S GS RN
Sbjct: 94 SRDSKIRPKMSEVVEVLKPLPHLKDMASASYYFQTMQAERLKAGSGSGSGRGFGS---RN 150
Query: 384 GQQ-RRSLSMANG-THASPYHHQFPPLSPKP 298
GQ R+LS +G +SPY HQ P SPKP
Sbjct: 151 GQPVFRTLSSPHGQAGSSPYRHQIP--SPKP 179
>ref|NP_186779.1| putative protein kinase; protein id: At3g01300.1, supported by
cDNA: 30775., supported by cDNA: gi_16209632
[Arabidopsis thaliana]
gi|6094554|gb|AAF03496.1|AC010676_6 putative protein
kinase [Arabidopsis thaliana]
gi|6714459|gb|AAF26145.1|AC008261_2 putative protein
kinase [Arabidopsis thaliana]
Length = 490
Score = 88.2 bits (217), Expect = 6e-17
Identities = 55/91 (60%), Positives = 61/91 (66%), Gaps = 2/91 (2%)
Frame = -1
Query: 564 SRDPKARPLMSEVVEALKPLPSLKDMASSSYYFQTMPAERFRASPNTRSTPTQGSLLTRN 385
SRD K RP MSEVVE LKPLP LKDMAS+SYYFQTM AER +A + S GS RN
Sbjct: 400 SRDSKIRPKMSEVVEVLKPLPHLKDMASASYYFQTMQAERLKAGSGSGSGRGFGS---RN 456
Query: 384 GQQ-RRSLSMANG-THASPYHHQFPPLSPKP 298
GQ R+LS +G +SPY HQ P SPKP
Sbjct: 457 GQPVFRTLSSPHGQAGSSPYRHQIP--SPKP 485
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 506,701,364
Number of Sequences: 1393205
Number of extensions: 10777854
Number of successful extensions: 26162
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 25135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26140
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20382500157
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
