KMC002886A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC002886A_C01 KMC002886A_c01
gtgtgtttggGACATGTAAAAGTTTTTCTTTTTAAAATCTCACAGTACCAAAAATATTGA
AGTTGCAACCAAAAAAGAAAAAAGAAGTGATAACAAACAGCAAAATTAGATATGCTCTCA
TAAGAGAGTACTTCTCATAGGATTACAAATACATCCATAACAAGTAACAAAAAGACCTAA
AAAACAAACAGCAAAACAAGAAACTGAATCCCAGATAGGAGGAATTCAAAAGCATAAGAA
CTTATTTCAGTTTGGTCTCCCCCGTGCACTTCTCATCTGATTATCCCCAGCCGAGGGATT
TAAAAATCTCAAACCAGTAAGAGTGCTACTTTCAGAATGCAATTAAAATCGTTCTCAATG
ATCAAAATTTATCAATCATTCAAAATCAGGCTTCTCCGGGCTATGTGCAGCCAGACCTTG
GGATGACAACATTTGCTGCATAACATCCAGCTCTCACGCATTCTTGAATAGGCTTCTCCC
TAACCAACTGTGCAAGAAATCCTCCAACAAATGCATCTCCTGCTCCATTTGTGTCAACCA
ATTTCTCTTTAGGCAATAGTATTACAGGGAACAATGTGACTTTTCCATCCTCAGCAACAC
ACACAGGATCTGCAGCTTGTGTGATAACAGTAATCCTTTTGTGTGTTCCTGATGCCTTTG
GGCATTGGGATATCTTGAAGGCAATCTCCTCAAC


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC002886A_C01 KMC002886A_c01
         (694 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_195950.1| putative protein; protein id: At5g03300.1, supp...   159  3e-38
ref|NP_187593.1| putative adenosine kinase; protein id: At3g0982...   157  1e-37
emb|CAB40376.1| adenosine kinase [Zea mays]                           154  9e-37
gb|AAO72629.1| adenosine kinase-like protein [Oryza sativa (japo...   153  2e-36
dbj|BAC02723.1| adenosine kinase [Oryza sativa]                       153  2e-36

>ref|NP_195950.1| putative protein; protein id: At5g03300.1, supported by cDNA:
           gi_12017763, supported by cDNA: gi_14596134, supported
           by cDNA: gi_18377467 [Arabidopsis thaliana]
           gi|17366963|sp|Q9LZG0|ADK2_ARATH Adenosine kinase 2 (AK
           2) (Adenosine 5'-phosphotransferase 2)
           gi|11279638|pir||T48351 adenosine kinase-like protein -
           Arabidopsis thaliana gi|7378610|emb|CAB83286.1|
           adenosine kinase-like protein [Arabidopsis thaliana]
           gi|9757781|dbj|BAB08390.1| adenosine kinase [Arabidopsis
           thaliana] gi|12017764|gb|AAG45247.1|AF180895_1 adenosine
           kinase 2 [Arabidopsis thaliana]
           gi|12017768|gb|AAG45249.1|AF180897_1 adenosine kinase 2
           [Arabidopsis thaliana] gi|14596135|gb|AAK68795.1|
           adenosine kinase [Arabidopsis thaliana]
           gi|18377468|gb|AAL66900.1| adenosine kinase [Arabidopsis
           thaliana]
          Length = 345

 Score =  159 bits (402), Expect = 3e-38
 Identities = 78/99 (78%), Positives = 88/99 (88%)
 Frame = -1

Query: 694 VEEIAFKISQCPKASGTHKRITVITQAADPVCVAEDGKVTLFPVILLPKEKLVDTNGAGD 515
           VE+IA KISQ PKA+GT+KR TVITQ ADPV VAEDGKV  +PVI LPKEKLVDTNGAGD
Sbjct: 241 VEQIAIKISQLPKATGTYKRTTVITQGADPVVVAEDGKVKKYPVIPLPKEKLVDTNGAGD 300

Query: 514 AFVGGFLAQLVREKPIQECVRAGCYAANVVIPRSGCT*P 398
           AFVGGF++QLV+EK I+ECV+AGCYA+NVVI RSGCT P
Sbjct: 301 AFVGGFMSQLVKEKSIEECVKAGCYASNVVIQRSGCTYP 339

>ref|NP_187593.1| putative adenosine kinase; protein id: At3g09820.1, supported by
           cDNA: gi_12017761, supported by cDNA: gi_14030720
           [Arabidopsis thaliana] gi|17367081|sp|Q9SF85|ADK1_ARATH
           Adenosine kinase 1 (AK 1) (Adenosine
           5'-phosphotransferase 1)
           gi|6681336|gb|AAF23253.1|AC015985_11 putative adenosine
           kinase [Arabidopsis thaliana]
           gi|12017762|gb|AAG45246.1|AF180894_1 adenosine kinase 1
           [Arabidopsis thaliana]
           gi|12017766|gb|AAG45248.1|AF180896_1 adenosine kinase 1
           [Arabidopsis thaliana]
           gi|14030721|gb|AAK53035.1|AF375451_1 AT3g09820/F8A24_13
           [Arabidopsis thaliana]
          Length = 344

 Score =  157 bits (397), Expect = 1e-37
 Identities = 79/99 (79%), Positives = 86/99 (86%)
 Frame = -1

Query: 694 VEEIAFKISQCPKASGTHKRITVITQAADPVCVAEDGKVTLFPVILLPKEKLVDTNGAGD 515
           VE+IA K+SQ PKASGT+KR TVITQ ADPV VAEDGKV  +PVI LPKEKLVDTNGAGD
Sbjct: 240 VEQIAIKMSQLPKASGTYKRTTVITQGADPVVVAEDGKVKKYPVIPLPKEKLVDTNGAGD 299

Query: 514 AFVGGFLAQLVREKPIQECVRAGCYAANVVIPRSGCT*P 398
           AFVGGFL+QLV  K I+ECVRAGCYA+NVVI RSGCT P
Sbjct: 300 AFVGGFLSQLVHGKGIEECVRAGCYASNVVIQRSGCTYP 338

>emb|CAB40376.1| adenosine kinase [Zea mays]
          Length = 331

 Score =  154 bits (390), Expect = 9e-37
 Identities = 78/99 (78%), Positives = 83/99 (83%)
 Frame = -1

Query: 694 VEEIAFKISQCPKASGTHKRITVITQAADPVCVAEDGKVTLFPVILLPKEKLVDTNGAGD 515
           +EEIA KISQ P ASG  KRI VITQ ADPV VAEDGKV  FPVILLPKEKLVDTNGAGD
Sbjct: 227 IEEIALKISQLPLASGKQKRIAVITQGADPVVVAEDGKVKTFPVILLPKEKLVDTNGAGD 286

Query: 514 AFVGGFLAQLVREKPIQECVRAGCYAANVVIPRSGCT*P 398
           AFVGGFL+QLV  K I++CVRAGCYAANV+I R GCT P
Sbjct: 287 AFVGGFLSQLVLGKGIEDCVRAGCYAANVIIQRPGCTYP 325

>gb|AAO72629.1| adenosine kinase-like protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 370

 Score =  153 bits (387), Expect = 2e-36
 Identities = 77/99 (77%), Positives = 85/99 (85%)
 Frame = -1

Query: 694 VEEIAFKISQCPKASGTHKRITVITQAADPVCVAEDGKVTLFPVILLPKEKLVDTNGAGD 515
           VEEIA KISQ P ASG  KRI VITQ ADPV VAEDG+V  FPVILLPKEKLVDTNGAGD
Sbjct: 266 VEEIALKISQLPLASGKQKRIAVITQGADPVVVAEDGQVKTFPVILLPKEKLVDTNGAGD 325

Query: 514 AFVGGFLAQLVREKPIQECVRAGCYAANVVIPRSGCT*P 398
           AFVGGFL+QLV++K I++ V+AGCYAANV+I RSGCT P
Sbjct: 326 AFVGGFLSQLVQQKSIEDSVKAGCYAANVIIQRSGCTYP 364

>dbj|BAC02723.1| adenosine kinase [Oryza sativa]
          Length = 296

 Score =  153 bits (387), Expect = 2e-36
 Identities = 77/99 (77%), Positives = 85/99 (85%)
 Frame = -1

Query: 694 VEEIAFKISQCPKASGTHKRITVITQAADPVCVAEDGKVTLFPVILLPKEKLVDTNGAGD 515
           VEEIA KISQ P ASG  KRI VITQ ADPV VAEDG+V  FPVILLPKEKLVDTNGAGD
Sbjct: 192 VEEIALKISQLPLASGKQKRIAVITQGADPVVVAEDGQVKTFPVILLPKEKLVDTNGAGD 251

Query: 514 AFVGGFLAQLVREKPIQECVRAGCYAANVVIPRSGCT*P 398
           AFVGGFL+QLV++K I++ V+AGCYAANV+I RSGCT P
Sbjct: 252 AFVGGFLSQLVQQKSIEDSVKAGCYAANVIIQRSGCTYP 290

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 598,905,664
Number of Sequences: 1393205
Number of extensions: 13102879
Number of successful extensions: 38093
Number of sequences better than 10.0: 346
Number of HSP's better than 10.0 without gapping: 36360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38047
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 31401661572
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 MPD040e01_f AV772738 1 597
2 MPD002a09_f AV770111 14 365
3 MPD097c11_f AV776337 24 426
4 MR043e01_f BP079330 24 384
5 GNf027b08 BP069292 29 490
6 SPD071b06_f BP049655 29 562
7 MF046c03_f BP030712 29 525
8 MR027d05_f BP078073 31 533
9 SPD077g03_f BP050184 31 586
10 GNf029f01 BP069476 32 411
11 MPD008d05_f AV770523 32 567
12 SPDL037h08_f BP054363 32 645
13 MFB075e12_f BP039476 33 568
14 MR085c03_f BP082526 76 206
15 SPDL093b03_f BP057815 78 713
16 MF002g12_f BP028358 79 568
17 GNf003e05 BP067597 82 253
18 GNf080c10 BP073264 94 555
19 MF020a04_f BP029289 95 270
20 MF085h05_f BP032796 98 673
21 SPDL065e12_f BP056049 99 543
22 MPD068b08_f AV774503 100 662
23 MPD089e02_f AV775860 101 584
24 MPD044a08_f AV772964 102 671
25 MPDL079e10_f AV780601 102 629
26 MPD089e03_f AV775861 104 584
27 GNf073d07 BP072767 107 526
28 SPD064f08_f BP049124 107 683
29 MR050b11_f BP079851 107 507
30 GNf058c02 BP071667 107 563
31 MR064g01_f BP080935 107 515
32 SPD014g04_f BP045138 108 500
33 SPD087a08_f BP050916 108 674
34 GNf100h07 BP074819 108 182
35 SPD031h11_f BP046504 108 635
36 MFB043g03_f BP037163 109 566
37 SPD062b09_f BP048918 109 693
38 SPDL083a04_f BP057157 109 629
39 MFB037a05_f BP036672 110 477
40 MF025f11_f BP029595 110 439
41 MF045c12_f BP030661 110 649
42 SPD100g07_f BP052006 110 697
43 SPDL081d04_f BP057049 111 622
44 SPD010e06_f BP044801 111 690
45 GNf007b07 BP067858 112 548
46 MWM088f10_f AV766179 115 419
47 MF072g12_f BP032140 115 584
48 MWM120d03_f AV766656 126 506
49 SPD004c04_f BP044303 132 682
50 MPD042f07_f AV772872 150 731




Lotus japonicus
Kazusa DNA Research Institute