KMC002886A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KMC002886A_C01 KMC002886A_c01
gtgtgtttggGACATGTAAAAGTTTTTCTTTTTAAAATCTCACAGTACCAAAAATATTGA
AGTTGCAACCAAAAAAGAAAAAAGAAGTGATAACAAACAGCAAAATTAGATATGCTCTCA
TAAGAGAGTACTTCTCATAGGATTACAAATACATCCATAACAAGTAACAAAAAGACCTAA
AAAACAAACAGCAAAACAAGAAACTGAATCCCAGATAGGAGGAATTCAAAAGCATAAGAA
CTTATTTCAGTTTGGTCTCCCCCGTGCACTTCTCATCTGATTATCCCCAGCCGAGGGATT
TAAAAATCTCAAACCAGTAAGAGTGCTACTTTCAGAATGCAATTAAAATCGTTCTCAATG
ATCAAAATTTATCAATCATTCAAAATCAGGCTTCTCCGGGCTATGTGCAGCCAGACCTTG
GGATGACAACATTTGCTGCATAACATCCAGCTCTCACGCATTCTTGAATAGGCTTCTCCC
TAACCAACTGTGCAAGAAATCCTCCAACAAATGCATCTCCTGCTCCATTTGTGTCAACCA
ATTTCTCTTTAGGCAATAGTATTACAGGGAACAATGTGACTTTTCCATCCTCAGCAACAC
ACACAGGATCTGCAGCTTGTGTGATAACAGTAATCCTTTTGTGTGTTCCTGATGCCTTTG
GGCATTGGGATATCTTGAAGGCAATCTCCTCAAC
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002886A_C01 KMC002886A_c01
(694 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195950.1| putative protein; protein id: At5g03300.1, supp... 159 3e-38
ref|NP_187593.1| putative adenosine kinase; protein id: At3g0982... 157 1e-37
emb|CAB40376.1| adenosine kinase [Zea mays] 154 9e-37
gb|AAO72629.1| adenosine kinase-like protein [Oryza sativa (japo... 153 2e-36
dbj|BAC02723.1| adenosine kinase [Oryza sativa] 153 2e-36
>ref|NP_195950.1| putative protein; protein id: At5g03300.1, supported by cDNA:
gi_12017763, supported by cDNA: gi_14596134, supported
by cDNA: gi_18377467 [Arabidopsis thaliana]
gi|17366963|sp|Q9LZG0|ADK2_ARATH Adenosine kinase 2 (AK
2) (Adenosine 5'-phosphotransferase 2)
gi|11279638|pir||T48351 adenosine kinase-like protein -
Arabidopsis thaliana gi|7378610|emb|CAB83286.1|
adenosine kinase-like protein [Arabidopsis thaliana]
gi|9757781|dbj|BAB08390.1| adenosine kinase [Arabidopsis
thaliana] gi|12017764|gb|AAG45247.1|AF180895_1 adenosine
kinase 2 [Arabidopsis thaliana]
gi|12017768|gb|AAG45249.1|AF180897_1 adenosine kinase 2
[Arabidopsis thaliana] gi|14596135|gb|AAK68795.1|
adenosine kinase [Arabidopsis thaliana]
gi|18377468|gb|AAL66900.1| adenosine kinase [Arabidopsis
thaliana]
Length = 345
Score = 159 bits (402), Expect = 3e-38
Identities = 78/99 (78%), Positives = 88/99 (88%)
Frame = -1
Query: 694 VEEIAFKISQCPKASGTHKRITVITQAADPVCVAEDGKVTLFPVILLPKEKLVDTNGAGD 515
VE+IA KISQ PKA+GT+KR TVITQ ADPV VAEDGKV +PVI LPKEKLVDTNGAGD
Sbjct: 241 VEQIAIKISQLPKATGTYKRTTVITQGADPVVVAEDGKVKKYPVIPLPKEKLVDTNGAGD 300
Query: 514 AFVGGFLAQLVREKPIQECVRAGCYAANVVIPRSGCT*P 398
AFVGGF++QLV+EK I+ECV+AGCYA+NVVI RSGCT P
Sbjct: 301 AFVGGFMSQLVKEKSIEECVKAGCYASNVVIQRSGCTYP 339
>ref|NP_187593.1| putative adenosine kinase; protein id: At3g09820.1, supported by
cDNA: gi_12017761, supported by cDNA: gi_14030720
[Arabidopsis thaliana] gi|17367081|sp|Q9SF85|ADK1_ARATH
Adenosine kinase 1 (AK 1) (Adenosine
5'-phosphotransferase 1)
gi|6681336|gb|AAF23253.1|AC015985_11 putative adenosine
kinase [Arabidopsis thaliana]
gi|12017762|gb|AAG45246.1|AF180894_1 adenosine kinase 1
[Arabidopsis thaliana]
gi|12017766|gb|AAG45248.1|AF180896_1 adenosine kinase 1
[Arabidopsis thaliana]
gi|14030721|gb|AAK53035.1|AF375451_1 AT3g09820/F8A24_13
[Arabidopsis thaliana]
Length = 344
Score = 157 bits (397), Expect = 1e-37
Identities = 79/99 (79%), Positives = 86/99 (86%)
Frame = -1
Query: 694 VEEIAFKISQCPKASGTHKRITVITQAADPVCVAEDGKVTLFPVILLPKEKLVDTNGAGD 515
VE+IA K+SQ PKASGT+KR TVITQ ADPV VAEDGKV +PVI LPKEKLVDTNGAGD
Sbjct: 240 VEQIAIKMSQLPKASGTYKRTTVITQGADPVVVAEDGKVKKYPVIPLPKEKLVDTNGAGD 299
Query: 514 AFVGGFLAQLVREKPIQECVRAGCYAANVVIPRSGCT*P 398
AFVGGFL+QLV K I+ECVRAGCYA+NVVI RSGCT P
Sbjct: 300 AFVGGFLSQLVHGKGIEECVRAGCYASNVVIQRSGCTYP 338
>emb|CAB40376.1| adenosine kinase [Zea mays]
Length = 331
Score = 154 bits (390), Expect = 9e-37
Identities = 78/99 (78%), Positives = 83/99 (83%)
Frame = -1
Query: 694 VEEIAFKISQCPKASGTHKRITVITQAADPVCVAEDGKVTLFPVILLPKEKLVDTNGAGD 515
+EEIA KISQ P ASG KRI VITQ ADPV VAEDGKV FPVILLPKEKLVDTNGAGD
Sbjct: 227 IEEIALKISQLPLASGKQKRIAVITQGADPVVVAEDGKVKTFPVILLPKEKLVDTNGAGD 286
Query: 514 AFVGGFLAQLVREKPIQECVRAGCYAANVVIPRSGCT*P 398
AFVGGFL+QLV K I++CVRAGCYAANV+I R GCT P
Sbjct: 287 AFVGGFLSQLVLGKGIEDCVRAGCYAANVIIQRPGCTYP 325
>gb|AAO72629.1| adenosine kinase-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 370
Score = 153 bits (387), Expect = 2e-36
Identities = 77/99 (77%), Positives = 85/99 (85%)
Frame = -1
Query: 694 VEEIAFKISQCPKASGTHKRITVITQAADPVCVAEDGKVTLFPVILLPKEKLVDTNGAGD 515
VEEIA KISQ P ASG KRI VITQ ADPV VAEDG+V FPVILLPKEKLVDTNGAGD
Sbjct: 266 VEEIALKISQLPLASGKQKRIAVITQGADPVVVAEDGQVKTFPVILLPKEKLVDTNGAGD 325
Query: 514 AFVGGFLAQLVREKPIQECVRAGCYAANVVIPRSGCT*P 398
AFVGGFL+QLV++K I++ V+AGCYAANV+I RSGCT P
Sbjct: 326 AFVGGFLSQLVQQKSIEDSVKAGCYAANVIIQRSGCTYP 364
>dbj|BAC02723.1| adenosine kinase [Oryza sativa]
Length = 296
Score = 153 bits (387), Expect = 2e-36
Identities = 77/99 (77%), Positives = 85/99 (85%)
Frame = -1
Query: 694 VEEIAFKISQCPKASGTHKRITVITQAADPVCVAEDGKVTLFPVILLPKEKLVDTNGAGD 515
VEEIA KISQ P ASG KRI VITQ ADPV VAEDG+V FPVILLPKEKLVDTNGAGD
Sbjct: 192 VEEIALKISQLPLASGKQKRIAVITQGADPVVVAEDGQVKTFPVILLPKEKLVDTNGAGD 251
Query: 514 AFVGGFLAQLVREKPIQECVRAGCYAANVVIPRSGCT*P 398
AFVGGFL+QLV++K I++ V+AGCYAANV+I RSGCT P
Sbjct: 252 AFVGGFLSQLVQQKSIEDSVKAGCYAANVIIQRSGCTYP 290
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 598,905,664
Number of Sequences: 1393205
Number of extensions: 13102879
Number of successful extensions: 38093
Number of sequences better than 10.0: 346
Number of HSP's better than 10.0 without gapping: 36360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38047
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 31401661572
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
EST assemble image
|
|
|
|
clone |
accession |
position |
1 |
MPD040e01_f |
AV772738 |
1 |
597 |
2 |
MPD002a09_f |
AV770111 |
14 |
365 |
3 |
MPD097c11_f |
AV776337 |
24 |
426 |
4 |
MR043e01_f |
BP079330 |
24 |
384 |
5 |
GNf027b08 |
BP069292 |
29 |
490 |
6 |
SPD071b06_f |
BP049655 |
29 |
562 |
7 |
MF046c03_f |
BP030712 |
29 |
525 |
8 |
MR027d05_f |
BP078073 |
31 |
533 |
9 |
SPD077g03_f |
BP050184 |
31 |
586 |
10 |
GNf029f01 |
BP069476 |
32 |
411 |
11 |
MPD008d05_f |
AV770523 |
32 |
567 |
12 |
SPDL037h08_f |
BP054363 |
32 |
645 |
13 |
MFB075e12_f |
BP039476 |
33 |
568 |
14 |
MR085c03_f |
BP082526 |
76 |
206 |
15 |
SPDL093b03_f |
BP057815 |
78 |
713 |
16 |
MF002g12_f |
BP028358 |
79 |
568 |
17 |
GNf003e05 |
BP067597 |
82 |
253 |
18 |
GNf080c10 |
BP073264 |
94 |
555 |
19 |
MF020a04_f |
BP029289 |
95 |
270 |
20 |
MF085h05_f |
BP032796 |
98 |
673 |
21 |
SPDL065e12_f |
BP056049 |
99 |
543 |
22 |
MPD068b08_f |
AV774503 |
100 |
662 |
23 |
MPD089e02_f |
AV775860 |
101 |
584 |
24 |
MPD044a08_f |
AV772964 |
102 |
671 |
25 |
MPDL079e10_f |
AV780601 |
102 |
629 |
26 |
MPD089e03_f |
AV775861 |
104 |
584 |
27 |
GNf073d07 |
BP072767 |
107 |
526 |
28 |
SPD064f08_f |
BP049124 |
107 |
683 |
29 |
MR050b11_f |
BP079851 |
107 |
507 |
30 |
GNf058c02 |
BP071667 |
107 |
563 |
31 |
MR064g01_f |
BP080935 |
107 |
515 |
32 |
SPD014g04_f |
BP045138 |
108 |
500 |
33 |
SPD087a08_f |
BP050916 |
108 |
674 |
34 |
GNf100h07 |
BP074819 |
108 |
182 |
35 |
SPD031h11_f |
BP046504 |
108 |
635 |
36 |
MFB043g03_f |
BP037163 |
109 |
566 |
37 |
SPD062b09_f |
BP048918 |
109 |
693 |
38 |
SPDL083a04_f |
BP057157 |
109 |
629 |
39 |
MFB037a05_f |
BP036672 |
110 |
477 |
40 |
MF025f11_f |
BP029595 |
110 |
439 |
41 |
MF045c12_f |
BP030661 |
110 |
649 |
42 |
SPD100g07_f |
BP052006 |
110 |
697 |
43 |
SPDL081d04_f |
BP057049 |
111 |
622 |
44 |
SPD010e06_f |
BP044801 |
111 |
690 |
45 |
GNf007b07 |
BP067858 |
112 |
548 |
46 |
MWM088f10_f |
AV766179 |
115 |
419 |
47 |
MF072g12_f |
BP032140 |
115 |
584 |
48 |
MWM120d03_f |
AV766656 |
126 |
506 |
49 |
SPD004c04_f |
BP044303 |
132 |
682 |
50 |
MPD042f07_f |
AV772872 |
150 |
731 |
|
Lotus japonicus
Kazusa DNA Research Institute