Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002881A_C01 KMC002881A_c01
(1062 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_196392.1| putative protein; protein id: At5g07750.1 [Arab... 42 6e-06
ref|NP_193978.1| extensin - like protein; protein id: At4g22470.... 37 1e-04
pir||T07623 extensin homolog HRGP2 - soybean (fragment) gi|34745... 37 3e-04
ref|NP_174461.1| unknown protein; protein id: At1g31810.1 [Arabi... 42 3e-04
gb|EAA34623.1| predicted protein [Neurospora crassa] 43 4e-04
>ref|NP_196392.1| putative protein; protein id: At5g07750.1 [Arabidopsis thaliana]
gi|9759597|dbj|BAB11454.1|
gb|AAD23008.1~gene_id:MBK20.21~similar to unknown protein
[Arabidopsis thaliana]
Length = 1289
Score = 41.6 bits (96), Expect(2) = 6e-06
Identities = 27/70 (38%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = -3
Query: 913 LPPFLPPFLHHNPPPFA-------TDLPPPTPSHRFFHLHQISCQHRLLAVPDLRQPPPP 755
LPP PP PPPFA T LPPP P + L+ + + PPPP
Sbjct: 809 LPPPPPP----PPPPFASVRRNSETLLPPPPPPPPWKSLYASTFETHEACSTSSSPPPPP 864
Query: 754 PPPSVSSLST 725
PPP S L+T
Sbjct: 865 PPPPFSPLNT 874
Score = 35.8 bits (81), Expect = 1.2
Identities = 39/146 (26%), Positives = 55/146 (36%), Gaps = 19/146 (13%)
Frame = -3
Query: 916 PLPPFLPPFLHHN----------PPPFATD-------LPPPTPSHRFFHLHQISCQHRLL 788
P PP LP + H+ PPPF+++ LPPP P F + + L
Sbjct: 651 PPPPPLPTYSHYQTSQLPPPPPPPPPFSSERPNSGTVLPPPPPPPPPFSSERPNSGTVL- 709
Query: 787 AVPDLRQPPPPPPPSVSSLSTRSVTTTLSRRVRS--ESTTSICFLLHQICGYRRIPPSAT 614
PPPPPPP S + T L +S + + IC + P S+
Sbjct: 710 -------PPPPPPPLPFSSERPNSGTVLPPPPSPPWKSVYASALAIPAICSTSQAPTSSP 762
Query: 613 TTLISAPTSPSAASTTCHRSTVLPGS 536
T P P A + +S+ L S
Sbjct: 763 T----PPPPPPAYYSVGQKSSDLQTS 784
Score = 35.4 bits (80), Expect(2) = 0.007
Identities = 22/64 (34%), Positives = 26/64 (40%)
Frame = -3
Query: 916 PLPPFLPPFLHHNPPPFATDLPPPTPSHRFFHLHQISCQHRLLAVPDLRQPPPPPPPSVS 737
P PP PP + +PPP PPP P P PPPPPPP S
Sbjct: 969 PPPPPPPPPGYGSPPP-----PPPPP-------------------PSYGSPPPPPPPPFS 1004
Query: 736 SLST 725
+S+
Sbjct: 1005 HVSS 1008
Score = 35.0 bits (79), Expect(2) = 8e-05
Identities = 27/78 (34%), Positives = 33/78 (41%), Gaps = 12/78 (15%)
Frame = -3
Query: 916 PLPPFLPPFLHHN----------PPPFATDLPPPTPSHRFFHLHQISCQHRLLAVPDLRQ 767
P PP PPF N PPP P+PS + LH IS P ++
Sbjct: 861 PPPPPPPPFSPLNTTKANDYILPPPPLPYTSIAPSPSVKILPLHGISSAPS----PPVKT 916
Query: 766 --PPPPPPPSVSSLSTRS 719
PPPPPPP ++ S S
Sbjct: 917 APPPPPPPPFSNAHSVLS 934
Score = 34.7 bits (78), Expect(2) = 8e-04
Identities = 25/76 (32%), Positives = 31/76 (39%), Gaps = 7/76 (9%)
Frame = -1
Query: 687 PSPPPASVSSFIRSVAIAEFRRQQQPP*SPPPHHHLR-------PQPLAIAPLSSLVLAA 529
P PPP +S R+ +E PP PPP +R P P P SL +
Sbjct: 791 PPPPPPPFASVRRN---SETLLPPPPPPPPPPFASVRRNSETLLPPPPPPPPWKSLYAST 847
Query: 528 VEFATVSSLPTSPPPP 481
E S +SPPPP
Sbjct: 848 FETHEACSTSSSPPPP 863
Score = 33.9 bits (76), Expect(2) = 8e-05
Identities = 26/85 (30%), Positives = 30/85 (34%)
Frame = -1
Query: 735 PCPQDL*PPRSLAVSDPSPPPASVSSFIRSVAIAEFRRQQQPP*SPPPHHHLRPQPLAIA 556
P P PP + P PPP S PP PPP + P P
Sbjct: 956 PPPPPPPPPSYGSPPPPPPPPPGYGS--------------PPPPPPPPPSYGSPPPPPPP 1001
Query: 555 PLSSLVLAAVEFATVSSLPTSPPPP 481
P F+ VSS+P PPPP
Sbjct: 1002 P----------FSHVSSIPPPPPPP 1016
Score = 33.5 bits (75), Expect = 5.8
Identities = 20/57 (35%), Positives = 22/57 (38%)
Frame = -3
Query: 916 PLPPFLPPFLHHNPPPFATDLPPPTPSHRFFHLHQISCQHRLLAVPDLRQPPPPPPP 746
P PP PP + +PPP PPP P P PPPPPPP
Sbjct: 943 PPPPPPPPPSYGSPPP-----PPPPP-------------------PSYGSPPPPPPP 975
Score = 33.5 bits (75), Expect = 5.8
Identities = 22/67 (32%), Positives = 25/67 (36%), Gaps = 6/67 (8%)
Frame = -3
Query: 916 PLPPFLPPF------LHHNPPPFATDLPPPTPSHRFFHLHQISCQHRLLAVPDLRQPPPP 755
P PP PPF L PP + + PPP P + PPPP
Sbjct: 918 PPPPPPPPFSNAHSVLSPPPPSYGSPPPPPPPPPSY----------------GSPPPPPP 961
Query: 754 PPPSVSS 734
PPPS S
Sbjct: 962 PPPSYGS 968
Score = 33.5 bits (75), Expect = 5.8
Identities = 40/140 (28%), Positives = 53/140 (37%), Gaps = 10/140 (7%)
Frame = -1
Query: 708 RSLAVSDPSPPPASVSSFIRSVAIAEFRRQQQPP*SPPPHHH----------LRPQPLAI 559
+++A P PPP + ++ + ++ Q PP PPP L P P
Sbjct: 642 QAVASPPPPPPPPPLPTY------SHYQTSQLPPPPPPPPPFSSERPNSGTVLPPPPPPP 695
Query: 558 APLSSLVLAAVEFATVSSLPTSPPPPL*WMSHSPSQLGCCHAMESLRTVSVFPLACWSCL 379
P SS TV LP PPPPL + S P+ S SV+ S L
Sbjct: 696 PPFSS---ERPNSGTV--LPPPPPPPLPFSSERPNSGTVLPPPPSPPWKSVYA----SAL 746
Query: 378 FGPLYCS*SLATGFLGSQPP 319
P CS S A + PP
Sbjct: 747 AIPAICSTSQAPTSSPTPPP 766
Score = 31.2 bits (69), Expect(2) = 6e-06
Identities = 23/78 (29%), Positives = 28/78 (35%)
Frame = -1
Query: 714 PPRSLAVSDPSPPPASVSSFIRSVAIAEFRRQQQPP*SPPPHHHLRPQPLAIAPLSSLVL 535
PP A P PPP S + + S + PP PPP + P P P
Sbjct: 912 PPVKTAPPPPPPPPFSNAHSVLSPPPPSYGSPPPPP-PPPPSYGSPPPPPPPPP------ 964
Query: 534 AAVEFATVSSLPTSPPPP 481
+ S P PPPP
Sbjct: 965 ------SYGSPPPPPPPP 976
Score = 31.2 bits (69), Expect(2) = 0.63
Identities = 21/57 (36%), Positives = 21/57 (36%)
Frame = -3
Query: 916 PLPPFLPPFLHHNPPPFATDLPPPTPSHRFFHLHQISCQHRLLAVPDLRQPPPPPPP 746
P PP PP PPP PPP P H P PPPPPPP
Sbjct: 1023 PPPPPPPPMHGGAPPP-----PPPPPMHG--------------GAP----PPPPPPP 1056
Score = 30.8 bits (68), Expect(2) = 8e-04
Identities = 15/51 (29%), Positives = 24/51 (46%)
Frame = -3
Query: 901 LPPFLHHNPPPFATDLPPPTPSHRFFHLHQISCQHRLLAVPDLRQPPPPPP 749
+P + P ++ PPP P ++ + Q S + +P PPPPPP
Sbjct: 748 IPAICSTSQAPTSSPTPPPPPP-AYYSVGQKSSDLQTSQLPSPPPPPPPPP 797
Score = 30.8 bits (68), Expect(2) = 0.023
Identities = 21/58 (36%), Positives = 23/58 (39%)
Frame = -3
Query: 919 LPLPPFLPPFLHHNPPPFATDLPPPTPSHRFFHLHQISCQHRLLAVPDLRQPPPPPPP 746
LP PP PP P T LPPP P F + + L PPPP PP
Sbjct: 688 LPPPPPPPPPFSSERPNSGTVLPPPPPPPLPFSSERPNSGTVL--------PPPPSPP 737
Score = 29.6 bits (65), Expect(2) = 0.023
Identities = 21/71 (29%), Positives = 28/71 (38%)
Frame = -1
Query: 693 SDPSPPPASVSSFIRSVAIAEFRRQQQPP*SPPPHHHLRPQPLAIAPLSSLVLAAVEFAT 514
S P+PPP + + ++ + Q P PPP P P A +S L
Sbjct: 760 SSPTPPPPPPAYYSVGQKSSDLQTSQLPSPPPPP----PPPPFASVRRNSETL------- 808
Query: 513 VSSLPTSPPPP 481
LP PPPP
Sbjct: 809 ---LPPPPPPP 816
Score = 26.9 bits (58), Expect(2) = 0.007
Identities = 23/91 (25%), Positives = 27/91 (29%)
Frame = -1
Query: 750 HRQFLPCPQDL*PPRSLAVSDPSPPPASVSSFIRSVAIAEFRRQQQPP*SPPPHHHLRPQ 571
H +P P P A P PPP + PP PPP H P
Sbjct: 1005 HVSSIPPPPPPPPMHGGAPPPPPPPPMHGGA--------------PPPPPPPPMHGGAPP 1050
Query: 570 PLAIAPLSSLVLAAVEFATVSSLPTSPPPPL 478
P P+ P PPPP+
Sbjct: 1051 PPPPPPMH------------GGAPPPPPPPM 1069
Score = 24.3 bits (51), Expect(2) = 0.63
Identities = 15/49 (30%), Positives = 17/49 (34%)
Frame = -1
Query: 714 PPRSLAVSDPSPPPASVSSFIRSVAIAEFRRQQQPP*SPPPHHHLRPQP 568
PP + P PPP + R PP PPP H P P
Sbjct: 1089 PPPPMRGGAPPPPPPPM-------------RGGAPPPPPPPMHGGAPPP 1124
>ref|NP_193978.1| extensin - like protein; protein id: At4g22470.1 [Arabidopsis
thaliana] gi|7446489|pir||T05441 proline-rich protein
F7K2.50 - Arabidopsis thaliana (fragment)
gi|25307797|pir||D85257 extensin-like protein [imported]
- Arabidopsis thaliana gi|4455154|emb|CAA22152.1|
extensin-like protein [Arabidopsis thaliana]
gi|7269093|emb|CAB79202.1| extensin-like protein
[Arabidopsis thaliana]
Length = 379
Score = 37.4 bits (85), Expect(2) = 1e-04
Identities = 31/97 (31%), Positives = 38/97 (38%)
Frame = -1
Query: 729 PQDL*PPRSLAVSDPSPPPASVSSFIRSVAIAEFRRQQQPP*SPPPHHHLRPQPLAIAPL 550
P+ L PP S + P PPPA ++ PP SPPP P PLA P
Sbjct: 94 PKPLPPPLSPPQTTPPPPPAITPPPPPAIT---------PPLSPPPPAITPPPPLATTP- 143
Query: 549 SSLVLAAVEFATVSSLPTSPPPPL*WMSHSPSQLGCC 439
+L + T PPPP SP +G C
Sbjct: 144 PALPPKPLPPPLSPPQTTPPPPPAITPPLSPPLVGIC 180
Score = 32.7 bits (73), Expect = 9.9
Identities = 55/219 (25%), Positives = 68/219 (30%), Gaps = 12/219 (5%)
Frame = -3
Query: 916 PLPPFLPPFLHHNPPPFATDLPPPTPSHRFFHLHQISCQHRLLAVPDLRQPPP--PPPPS 743
PLPP L P PPP A PPP P+ P L PPP PPP
Sbjct: 96 PLPPPLSPPQTTPPPPPAI-TPPPPPA----------------ITPPLSPPPPAITPPPP 138
Query: 742 VSSLSTRSVTTTLSRRVRSESTTSICFLLHQICGYRRIPPSATTTLISAPTSPSAASTTC 563
+++ L + TT PP A I+ P SP
Sbjct: 139 LATTPPALPPKPLPPPLSPPQTTP-------------PPPPA----ITPPLSPPLVGICS 181
Query: 562 HRSTVLPGSCCGGVCDGILLANFATTTSVMDVSLSFTAGLLPCYGISQN--------CFC 407
T L +C GIL + T T PC I +N CFC
Sbjct: 182 KNDTELK------ICAGILAISDGLLT---------TGRAEPCCSIIRNVSDLDAVTCFC 226
Query: 406 LPPGLLELLVWPLVLQLKPCYGLSWLATPGRV--ALSCP 296
G L P +G+ + R+ SCP
Sbjct: 227 KSVGAPR-------FSLSPNFGIFFKVCGRRIPQGFSCP 258
Score = 30.8 bits (68), Expect(2) = 1e-04
Identities = 19/63 (30%), Positives = 22/63 (34%)
Frame = -3
Query: 925 LFLPLPPFLPPFLHHNPPPFATDLPPPTPSHRFFHLHQISCQHRLLAVPDLRQPPPPPPP 746
++ P PP + PPP D PPTP P PPPPP
Sbjct: 32 VYCPPPPPCICICNPGPPPPQPDPQPPTPP-------------TFQPAPPANDQPPPPPQ 78
Query: 745 SVS 737
S S
Sbjct: 79 STS 81
>pir||T07623 extensin homolog HRGP2 - soybean (fragment)
gi|347455|gb|AAA33971.1| hydroxyproline-rich
glycoprotein
Length = 169
Score = 36.6 bits (83), Expect(2) = 3e-04
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = -3
Query: 916 PLPPFLPPFLHHNPPPFATDLPPPTPSHRFFHLHQISCQHRLLAVPDLRQPPPPPPPS 743
P PP PP+ +H+PPP + PPP ++ H P + PPPP PS
Sbjct: 30 PSPP--PPYYYHSPPPPSPSPPPP------YYYHSPPPPSPSPPSPYYYKSPPPPSPS 79
Score = 33.1 bits (74), Expect = 7.6
Identities = 20/61 (32%), Positives = 26/61 (41%)
Frame = -3
Query: 916 PLPPFLPPFLHHNPPPFATDLPPPTPSHRFFHLHQISCQHRLLAVPDLRQPPPPPPPSVS 737
P PP PP+ + +PPP + PPP ++ H P PPPP PS
Sbjct: 14 PSPP--PPYYYKSPPPPSPSPPPP------YYYHSPPPPSPSPPPPYYYHSPPPPSPSPP 65
Query: 736 S 734
S
Sbjct: 66 S 66
Score = 30.8 bits (68), Expect(2) = 3e-04
Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 10/96 (10%)
Frame = -1
Query: 735 PCPQDL*PPRSLAVSDPSPPPASVSSFI-------RSVAIAEFRRQQQPP*SP---PPHH 586
P P PP S P P P S + S + PP SP PP+H
Sbjct: 74 PPPSPSPPPPYYYKSPPPPSPTSHPPYYYKSPPPPTSYPPPPYHYVSPPPPSPSPPPPYH 133
Query: 585 HLRPQPLAIAPLSSLVLAAVEFATVSSLPTSPPPPL 478
+ P P + AP + + + SPPPP+
Sbjct: 134 YTSPPPPSPAPAPKYIYKSPPPPVY--IYASPPPPI 167
>ref|NP_174461.1| unknown protein; protein id: At1g31810.1 [Arabidopsis thaliana]
gi|25403124|pir||G86441 unknown protein [imported] -
Arabidopsis thaliana
gi|12321294|gb|AAG50715.1|AC079041_8 unknown protein
[Arabidopsis thaliana]
Length = 1201
Score = 41.6 bits (96), Expect = 0.021
Identities = 25/66 (37%), Positives = 28/66 (41%), Gaps = 1/66 (1%)
Frame = -3
Query: 916 PLPP-FLPPFLHHNPPPFATDLPPPTPSHRFFHLHQISCQHRLLAVPDLRQPPPPPPPSV 740
PLP +PP L PPP PPP PS R + P PPPPPPPS
Sbjct: 581 PLPSRSIPPPLAQPPPPRPPPPPPPPPSSRS------------IPSPSAPPPPPPPPPSF 628
Query: 739 SSLSTR 722
S +
Sbjct: 629 GSTGNK 634
Score = 38.5 bits (88), Expect = 0.18
Identities = 33/116 (28%), Positives = 41/116 (34%), Gaps = 10/116 (8%)
Frame = -1
Query: 768 NHHHHHHRQFLPCPQDL*PPRSLAVSDPS--------PPPASVSSFIRSVAIAEFRRQQQ 613
+HHHHH +P + P +L PS PPP + F Q
Sbjct: 448 SHHHHHE---IPAKDSVDNPLNLPSDPPSSGDHVTLLPPPPPPPPPPLFTSTTSFSPSQP 504
Query: 612 PP*SPPPHHHLRPQPLAIAPLSSLVLAAVEFATVSSLPTSPPPPL--*WMSHSPSQ 451
PP PPP L ++ F+ P PPPPL S SPSQ
Sbjct: 505 PPPPPPP---------------PLFMSTTSFSPSQPPPPPPPPPLFTSTTSFSPSQ 545
Score = 38.1 bits (87), Expect = 0.23
Identities = 28/77 (36%), Positives = 31/77 (39%), Gaps = 11/77 (14%)
Frame = -3
Query: 916 PLPPFLPPFLHHNP-----------PPFATDLPPPTPSHRFFHLHQISCQHRLLAVPDLR 770
P PP LP F + +P PP PPP PS LA P
Sbjct: 547 PPPPPLPSFSNRDPLTTLHQPINKTPPPPPPPPPPLPSRSI---------PPPLAQPPPP 597
Query: 769 QPPPPPPPSVSSLSTRS 719
+PPPPPPP SS S S
Sbjct: 598 RPPPPPPPPPSSRSIPS 614
Score = 37.7 bits (86), Expect = 0.31
Identities = 42/131 (32%), Positives = 53/131 (40%), Gaps = 10/131 (7%)
Frame = -1
Query: 840 PVTVSSISIRSPASTVSSPSQICGNHHHHHHRQFLPCPQDL*PPRS---LAVSDPSPPPA 670
P SS SI SP++ P + RQ P P PP + A P PPP
Sbjct: 604 PPPPSSRSIPSPSAPPPPPPPPPSFGSTGNKRQAQPPPPPPPPPPTRIPAAKCAPPPPPP 663
Query: 669 SVSSFIRSVAIAEFRRQQQPP*SPPPHHHL--RPQPLAIAPL--SSLVLAA---VEFATV 511
+S S+ + PP PPP ++ P+P A PL SS L A +
Sbjct: 664 PPTSHSGSIRVGPPSTPPPPP-PPPPKANISNAPKPPAPPPLPPSSTRLGAPPPPPPPPL 722
Query: 510 SSLPTSPPPPL 478
S P PPPPL
Sbjct: 723 SKTPAPPPPPL 733
Score = 35.8 bits (81), Expect(2) = 0.008
Identities = 23/69 (33%), Positives = 29/69 (41%)
Frame = -3
Query: 925 LFLPLPPFLPPFLHHNPPPFATDLPPPTPSHRFFHLHQISCQHRLLAVPDLRQPPPPPPP 746
L P PP PP L + F+ PPP P + S P PPPPPPP
Sbjct: 480 LLPPPPPPPPPPLFTSTTSFSPSQPPPPPPPPPLFMSTTSFS------PSQPPPPPPPPP 533
Query: 745 SVSSLSTRS 719
+S ++ S
Sbjct: 534 LFTSTTSFS 542
Score = 35.8 bits (81), Expect(2) = 3e-04
Identities = 31/95 (32%), Positives = 37/95 (38%), Gaps = 10/95 (10%)
Frame = -1
Query: 735 PCPQDL*PPRSLAVSDPS---PPPASVSSFIRSVAIAEFRRQQQPP*SPPPHHHLR---- 577
P P PP S ++ PS PPP SF +RQ QPP PPP R
Sbjct: 599 PPPPPPPPPSSRSIPSPSAPPPPPPPPPSF----GSTGNKRQAQPPPPPPPPPPTRIPAA 654
Query: 576 ---PQPLAIAPLSSLVLAAVEFATVSSLPTSPPPP 481
P P P S ++ S+ P PPPP
Sbjct: 655 KCAPPPPPPPPTSH--SGSIRVGPPSTPPPPPPPP 687
Score = 34.3 bits (77), Expect = 3.4
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = -3
Query: 916 PLPPFLPPFLHHNPPPFATDLPPPTPS-HRFFHLHQISCQHRLLAVPDLRQPPPPPPPSV 740
P PP PP L + F+ PPP P F + ++ H+ + PPPPPP
Sbjct: 525 PPPPPPPPPLFTSTTSFSPSQPPPPPPLPSFSNRDPLTTLHQPINKTPPPPPPPPPP--- 581
Query: 739 SSLSTRSVTTTLSR 698
L +RS+ L++
Sbjct: 582 --LPSRSIPPPLAQ 593
Score = 33.9 bits (76), Expect(2) = 0.11
Identities = 25/75 (33%), Positives = 30/75 (39%)
Frame = -3
Query: 916 PLPPFLPPFLHHNPPPFATDLPPPTPSHRFFHLHQISCQHRLLAVPDLRQPPPPPPPSVS 737
P PP PP L + F+ PPP P S QPPPPPP +
Sbjct: 504 PPPPPPPPPLFMSTTSFSPSQPPPPPPPPPLFTSTTSFSPS--------QPPPPPP--LP 553
Query: 736 SLSTRSVTTTLSRRV 692
S S R TTL + +
Sbjct: 554 SFSNRDPLTTLHQPI 568
Score = 33.1 bits (74), Expect = 7.6
Identities = 24/66 (36%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Frame = -3
Query: 916 PLPPFLPPFLHHNPP---PFATDLPPPTPSHRFFHLHQISCQHRLLAVPDLRQPPPPPPP 746
P PP PP PP P A PPP P H I P PPPPPPP
Sbjct: 639 PPPPPPPP-----PPTRIPAAKCAPPPPPPPPTSHSGSIRVG------PPSTPPPPPPPP 687
Query: 745 SVSSLS 728
+++S
Sbjct: 688 PKANIS 693
Score = 31.2 bits (69), Expect(2) = 3e-04
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = -2
Query: 920 LATTTFSPAVPPPQSTAVRDRSATTDAQSPFLPSPSDLLPAPSPRRP 780
++TT+FSP+ PPP ++TT + SP P P LP+ S R P
Sbjct: 515 MSTTSFSPSQPPPPPPPPPLFTSTT-SFSPSQPPPPPPLPSFSNRDP 560
Score = 26.2 bits (56), Expect(2) = 0.008
Identities = 26/86 (30%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Frame = -1
Query: 705 SLAVSDPSPPPASVSSFIRSVAIAEFRR--QQQPP*SPPPHHHLRPQPLAIAPLSSLVLA 532
S + S P PPP + SF + + + PP PPP P PL P S+
Sbjct: 540 SFSPSQP-PPPPPLPSFSNRDPLTTLHQPINKTPPPPPPP-----PPPL---PSRSIPPP 590
Query: 531 AVEFATVSSLPTSPPPPL*WMSHSPS 454
+ P PPPP SPS
Sbjct: 591 LAQPPPPRPPPPPPPPPSSRSIPSPS 616
Score = 24.3 bits (51), Expect(2) = 0.11
Identities = 20/69 (28%), Positives = 26/69 (36%)
Frame = -1
Query: 687 PSPPPASVSSFIRSVAIAEFRRQQQPP*SPPPHHHLRPQPLAIAPLSSLVLAAVEFATVS 508
P PPP + S +A+ + PP PPP R P AP +T +
Sbjct: 575 PPPPPPPLPSRSIPPPLAQPPPPRPPP-PPPPPPSSRSIPSPSAPPPPPPPPPSFGSTGN 633
Query: 507 SLPTSPPPP 481
PPPP
Sbjct: 634 KRQAQPPPP 642
>gb|EAA34623.1| predicted protein [Neurospora crassa]
Length = 452
Score = 43.1 bits (100), Expect = 0.007
Identities = 28/81 (34%), Positives = 32/81 (38%)
Frame = -3
Query: 913 LPPFLPPFLHHNPPPFATDLPPPTPSHRFFHLHQISCQHRLLAVPDLRQPPPPPPPSVSS 734
LPP PP PPP A PPP PS R PPPPPP SS
Sbjct: 261 LPPAPPP-----PPPTAAPRPPPAPS---------------------RSQPPPPPPPSSS 294
Query: 733 LSTRSVTTTLSRRVRSESTTS 671
S S + +R+ S+ S
Sbjct: 295 TSNLSQNIAVQAAIRAASSAS 315
Score = 41.6 bits (96), Expect = 0.021
Identities = 29/74 (39%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Frame = -3
Query: 916 PLPPFLPPFLHHNPPPFATDL---PPPTPSHRFFHLHQ-ISCQHRLLAVPDLRQP----P 761
P PP PP PPP + PPP PS +L Q I+ Q + A P P
Sbjct: 263 PAPPPPPPTAAPRPPPAPSRSQPPPPPPPSSSTSNLSQNIAVQAAIRAASSASSPAAPPP 322
Query: 760 PPPPPSVSSLSTRS 719
PPPPPS ST S
Sbjct: 323 PPPPPSAPPRSTAS 336
Score = 36.6 bits (83), Expect(2) = 4e-04
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = -1
Query: 714 PPRSLAVS-DPSPPPASVSSFIRSVAIAEFRRQQQPP*SPPPHHHLRPQPLAIAPLSSLV 538
PP S A S P+PPP ++ R + QPP PPP IA V
Sbjct: 253 PPSSAAPSLPPAPPPPPPTAAPRPPPAPS---RSQPPPPPPPSSSTSNLSQNIA-----V 304
Query: 537 LAAVEFATVSSLPTSPPPP 481
AA+ A+ +S P +PPPP
Sbjct: 305 QAAIRAASSASSPAAPPPP 323
Score = 32.7 bits (73), Expect(2) = 0.003
Identities = 31/98 (31%), Positives = 42/98 (42%), Gaps = 11/98 (11%)
Frame = -1
Query: 714 PPRSLAVSDPSPPP---ASVSSFIRSVAIAEFRR---QQQPP*SPPPHHHLRPQPLAIAP 553
PP + + S P PPP +S S+ +++A+ R P +PPP P P AP
Sbjct: 276 PPPAPSRSQPPPPPPPSSSTSNLSQNIAVQAAIRAASSASSPAAPPP-----PPPPPSAP 330
Query: 552 LSSLVLAAVEFATVSSLPTSPPPPL-----*WMSHSPS 454
S + A P PPPP +SHSPS
Sbjct: 331 PRSTASSPSHSAPA---PPPPPPPSSAPVPPSLSHSPS 365
Score = 30.8 bits (68), Expect(2) = 0.003
Identities = 21/58 (36%), Positives = 23/58 (39%)
Frame = -3
Query: 910 PPFLPPFLHHNPPPFATDLPPPTPSHRFFHLHQISCQHRLLAVPDLRQPPPPPPPSVS 737
PP PP PP FA PP PS A P L PPPPPP+ +
Sbjct: 239 PPSAPP----PPPSFA----PPPPSS---------------AAPSLPPAPPPPPPTAA 273
Score = 30.0 bits (66), Expect(2) = 4e-04
Identities = 20/53 (37%), Positives = 23/53 (42%), Gaps = 3/53 (5%)
Frame = -3
Query: 877 PPPFATDLPPPTPSHRFFHLHQISCQHRLLAVPDLRQPPP---PPPPSVSSLS 728
PPP PPP P R + S A P PPP PPPPS ++ S
Sbjct: 213 PPPPVGKKPPPPPGSR-----KPSAAIHSSAPPSAPPPPPSFAPPPPSSAAPS 260
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,122,481,516
Number of Sequences: 1393205
Number of extensions: 33044294
Number of successful extensions: 251838
Number of sequences better than 10.0: 1327
Number of HSP's better than 10.0 without gapping: 126271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206444
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 63188388383
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
