Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002874A_C01 KMC002874A_c01
(852 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_564654.1| dihydrolipoamide S-acetyltransferase, putative;... 202 7e-51
gb|AAK53067.1| mono-lipoyl E2 [Arabidopsis thaliana] 202 7e-51
pir||E96583 hypothetical protein F20D21.4 [imported] - Arabidops... 202 7e-51
gb|AAM97076.1| dihydrolipoamide S-acetyltransferase, putative [A... 200 3e-50
gb|AAM12967.1| dihydrolipoamide acetyltransferase [Arabidopsis t... 199 4e-50
>ref|NP_564654.1| dihydrolipoamide S-acetyltransferase, putative; protein id:
At1g54220.1, supported by cDNA: gi_14161721 [Arabidopsis
thaliana]
Length = 539
Score = 202 bits (513), Expect = 7e-51
Identities = 92/112 (82%), Positives = 107/112 (95%)
Frame = -1
Query: 849 IGEEVKQLAKKARENSLKPQDYEGGTFTVSNLGGPFGVKQFCAIINPPQAGILAVGSAER 670
IGEEV+ LA+KA+ENSLKP+DYEGGTFTVSNLGGPFG+KQFCA++NPPQA ILAVGSAE+
Sbjct: 428 IGEEVRLLAQKAKENSLKPEDYEGGTFTVSNLGGPFGIKQFCAVVNPPQAAILAVGSAEK 487
Query: 669 RVIPGSGAEEFKFASFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 514
RV+PG+G ++F FAS+M VTLSCDHRV+DGAIGAEWLKAFKGYIENP+SMLL
Sbjct: 488 RVVPGNGPDQFNFASYMPVTLSCDHRVVDGAIGAEWLKAFKGYIENPKSMLL 539
>gb|AAK53067.1| mono-lipoyl E2 [Arabidopsis thaliana]
Length = 539
Score = 202 bits (513), Expect = 7e-51
Identities = 92/112 (82%), Positives = 107/112 (95%)
Frame = -1
Query: 849 IGEEVKQLAKKARENSLKPQDYEGGTFTVSNLGGPFGVKQFCAIINPPQAGILAVGSAER 670
IGEEV+ LA+KA+ENSLKP+DYEGGTFTVSNLGGPFG+KQFCA++NPPQA ILAVGSAE+
Sbjct: 428 IGEEVRLLAQKAKENSLKPEDYEGGTFTVSNLGGPFGIKQFCAVVNPPQAAILAVGSAEK 487
Query: 669 RVIPGSGAEEFKFASFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 514
RV+PG+G ++F FAS+M VTLSCDHRV+DGAIGAEWLKAFKGYIENP+SMLL
Sbjct: 488 RVVPGNGPDQFNFASYMPVTLSCDHRVVDGAIGAEWLKAFKGYIENPKSMLL 539
>pir||E96583 hypothetical protein F20D21.4 [imported] - Arabidopsis thaliana
gi|4585966|gb|AAD25602.1|AC005287_4 Putative
dihyrdolipoamide acetyltransferase [Arabidopsis
thaliana]
Length = 516
Score = 202 bits (513), Expect = 7e-51
Identities = 92/112 (82%), Positives = 107/112 (95%)
Frame = -1
Query: 849 IGEEVKQLAKKARENSLKPQDYEGGTFTVSNLGGPFGVKQFCAIINPPQAGILAVGSAER 670
IGEEV+ LA+KA+ENSLKP+DYEGGTFTVSNLGGPFG+KQFCA++NPPQA ILAVGSAE+
Sbjct: 405 IGEEVRLLAQKAKENSLKPEDYEGGTFTVSNLGGPFGIKQFCAVVNPPQAAILAVGSAEK 464
Query: 669 RVIPGSGAEEFKFASFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 514
RV+PG+G ++F FAS+M VTLSCDHRV+DGAIGAEWLKAFKGYIENP+SMLL
Sbjct: 465 RVVPGNGPDQFNFASYMPVTLSCDHRVVDGAIGAEWLKAFKGYIENPKSMLL 516
>gb|AAM97076.1| dihydrolipoamide S-acetyltransferase, putative [Arabidopsis
thaliana]
Length = 539
Score = 200 bits (508), Expect = 3e-50
Identities = 91/112 (81%), Positives = 107/112 (95%)
Frame = -1
Query: 849 IGEEVKQLAKKARENSLKPQDYEGGTFTVSNLGGPFGVKQFCAIINPPQAGILAVGSAER 670
IGEEV+ LA+KA+E+SLKP+DYEGGTFTVSNLGGPFG+KQFCA++NPPQA ILAVGSAE+
Sbjct: 428 IGEEVRLLAQKAKESSLKPEDYEGGTFTVSNLGGPFGIKQFCAVVNPPQAAILAVGSAEK 487
Query: 669 RVIPGSGAEEFKFASFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 514
RV+PG+G ++F FAS+M VTLSCDHRV+DGAIGAEWLKAFKGYIENP+SMLL
Sbjct: 488 RVVPGNGPDQFNFASYMPVTLSCDHRVVDGAIGAEWLKAFKGYIENPKSMLL 539
>gb|AAM12967.1| dihydrolipoamide acetyltransferase [Arabidopsis thaliana]
Length = 539
Score = 199 bits (506), Expect = 4e-50
Identities = 92/112 (82%), Positives = 106/112 (94%)
Frame = -1
Query: 849 IGEEVKQLAKKARENSLKPQDYEGGTFTVSNLGGPFGVKQFCAIINPPQAGILAVGSAER 670
IGEEV+ LA+KA+ENSLKP+DYEGGTFTVSNLGGPFG+KQFCA+INPPQA ILA+GSAE+
Sbjct: 428 IGEEVRFLAQKAKENSLKPEDYEGGTFTVSNLGGPFGIKQFCAVINPPQAAILAIGSAEK 487
Query: 669 RVIPGSGAEEFKFASFMSVTLSCDHRVIDGAIGAEWLKAFKGYIENPESMLL 514
RV+PG+G +++ AS+MSVTLSCDHRVIDGAIGAEWLKAFKGYIE PESMLL
Sbjct: 488 RVVPGTGPDQYNVASYMSVTLSCDHRVIDGAIGAEWLKAFKGYIETPESMLL 539
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 722,203,016
Number of Sequences: 1393205
Number of extensions: 15665500
Number of successful extensions: 41608
Number of sequences better than 10.0: 437
Number of HSP's better than 10.0 without gapping: 39801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40996
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 44873636157
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
