Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002865A_C04 KMC002865A_c04
(707 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_181847.1| putative carboxyphosphonoenolpyruvate mutase; p... 103 1e-32
dbj|BAC42257.1| putative carboxyphosphonoenolpyruvate mutase [Ar... 103 1e-32
ref|NP_485903.1| carboxyphosphonoenolpyruvate phosphonomutase [N... 60 4e-08
ref|ZP_00074372.1| hypothetical protein [Trichodesmium erythraeu... 59 9e-08
ref|NP_737327.1| putative carboxyphosphonoenolpyruvate phosphono... 58 1e-07
>ref|NP_181847.1| putative carboxyphosphonoenolpyruvate mutase; protein id:
At2g43180.1 [Arabidopsis thaliana]
gi|25408843|pir||A84863 probable
carboxyphosphonoenolpyruvate mutase [imported] -
Arabidopsis thaliana gi|3763927|gb|AAC64307.1| putative
carboxyphosphonoenolpyruvate mutase [Arabidopsis
thaliana]
Length = 492
Score = 103 bits (258), Expect(2) = 1e-32
Identities = 51/68 (75%), Positives = 58/68 (85%)
Frame = -1
Query: 707 LFIDALASIEEMKAFCQVAPHVPKLANMLEGGGKTPILSPRELDEIGYKLVVYPLSLLGV 528
L +D+L S EEMKAFC V P VPKLANMLE GGK PIL+P EL+EIGYKLV YP+SL+GV
Sbjct: 245 LSVDSLVSREEMKAFCNVYPLVPKLANMLESGGKIPILNPLELEEIGYKLVAYPISLIGV 304
Query: 527 SIKAMQDA 504
SI+AMQDA
Sbjct: 305 SIQAMQDA 312
Score = 58.2 bits (139), Expect(2) = 1e-32
Identities = 28/44 (63%), Positives = 33/44 (74%)
Frame = -2
Query: 502 LAAIKEGGVPPPESMPSFEEIKDIVGFNAYYEEEKRYATSSGQQ 371
L AIK G +PPP SM S EEI +I+GF+ Y EEEKRYATSS +
Sbjct: 313 LLAIKGGRIPPPGSMASLEEIGEILGFDTYEEEEKRYATSSSDR 356
>dbj|BAC42257.1| putative carboxyphosphonoenolpyruvate mutase [Arabidopsis thaliana]
gi|28827730|gb|AAO50709.1| putative
carboxyphosphonoenolpyruvate mutase [Arabidopsis
thaliana]
Length = 479
Score = 103 bits (258), Expect(2) = 1e-32
Identities = 51/68 (75%), Positives = 58/68 (85%)
Frame = -1
Query: 707 LFIDALASIEEMKAFCQVAPHVPKLANMLEGGGKTPILSPRELDEIGYKLVVYPLSLLGV 528
L +D+L S EEMKAFC V P VPKLANMLE GGK PIL+P EL+EIGYKLV YP+SL+GV
Sbjct: 250 LSVDSLVSREEMKAFCNVYPLVPKLANMLESGGKIPILNPLELEEIGYKLVAYPISLIGV 309
Query: 527 SIKAMQDA 504
SI+AMQDA
Sbjct: 310 SIQAMQDA 317
Score = 58.2 bits (139), Expect(2) = 1e-32
Identities = 28/44 (63%), Positives = 33/44 (74%)
Frame = -2
Query: 502 LAAIKEGGVPPPESMPSFEEIKDIVGFNAYYEEEKRYATSSGQQ 371
L AIK G +PPP SM S EEI +I+GF+ Y EEEKRYATSS +
Sbjct: 318 LLAIKGGRIPPPGSMASLEEIGEILGFDTYEEEEKRYATSSSDR 361
>ref|NP_485903.1| carboxyphosphonoenolpyruvate phosphonomutase [Nostoc sp. PCC 7120]
gi|25324632|pir||AI2038 carboxyphosphonoenolpyruvate
phosphonomutase [imported] - Nostoc sp. (strain PCC
7120) gi|17130953|dbj|BAB73562.1|
carboxyphosphonoenolpyruvate phosphonomutase [Nostoc sp.
PCC 7120]
Length = 287
Score = 59.7 bits (143), Expect = 4e-08
Identities = 31/71 (43%), Positives = 45/71 (62%)
Frame = -1
Query: 707 LFIDALASIEEMKAFCQVAPHVPKLANMLEGGGKTPILSPRELDEIGYKLVVYPLSLLGV 528
LF++A S+ E+KA PH P +AN++E GGKTP LS EL ++G+K+V +PL+ L
Sbjct: 181 LFVEAPQSVAELKAIASAFPHTPLVANIVE-GGKTPPLSASELQDLGFKIVFFPLTGL-- 237
Query: 527 SIKAMQDATCC 495
+ Q T C
Sbjct: 238 -LAVTQTLTAC 247
>ref|ZP_00074372.1| hypothetical protein [Trichodesmium erythraeum IMS101]
Length = 291
Score = 58.5 bits (140), Expect = 9e-08
Identities = 32/65 (49%), Positives = 46/65 (70%)
Frame = -1
Query: 707 LFIDALASIEEMKAFCQVAPHVPKLANMLEGGGKTPILSPRELDEIGYKLVVYPLSLLGV 528
+FI+A S+E+++A V ANM+EGG KTP+LS +EL E+G+K+VVYPLS L
Sbjct: 181 VFIEAPQSLEDLQAIATAFEDVYLFANMIEGG-KTPVLSGQELAEMGFKIVVYPLSGLFS 239
Query: 527 SIKAM 513
+ +AM
Sbjct: 240 ATQAM 244
>ref|NP_737327.1| putative carboxyphosphonoenolpyruvate phosphonomutase
[Corynebacterium efficiens YS-314]
gi|23492554|dbj|BAC17527.1| putative
carboxyphosphonoenolpyruvate phosphonomutase
[Corynebacterium efficiens YS-314]
Length = 302
Score = 57.8 bits (138), Expect = 1e-07
Identities = 30/68 (44%), Positives = 46/68 (67%)
Frame = -1
Query: 707 LFIDALASIEEMKAFCQVAPHVPKLANMLEGGGKTPILSPRELDEIGYKLVVYPLSLLGV 528
+F +AL + EE + F + P VP LANM E G KT +L+ REL+EIGY V+YP++ L +
Sbjct: 190 IFPEALHTREEFEMFRRAVPEVPLLANMTEFG-KTELLTTRELEEIGYDAVIYPVTTLRI 248
Query: 527 SIKAMQDA 504
++ ++ A
Sbjct: 249 AMGHVEQA 256
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 567,243,339
Number of Sequences: 1393205
Number of extensions: 11550536
Number of successful extensions: 27659
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 26881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27639
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 32373034405
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
