Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002857A_C01 KMC002857A_c01
(441 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_179438.1| putative sugar transporter; protein id: At2g184... 172 8e-43
ref|NP_195385.1| sugar transporter like protein; protein id: At4... 166 8e-41
gb|AAL58131.1|AC093093_4 putative mannitol transporter protein [... 149 8e-36
gb|AAK13147.1|AC083945_22 Putative sugar transporter [Oryza sativa] 149 8e-36
ref|NP_188513.1| sugar transport, putative; protein id: At3g1883... 135 1e-31
>ref|NP_179438.1| putative sugar transporter; protein id: At2g18480.1 [Arabidopsis
thaliana] gi|25308961|pir||G84564 probable sugar
transporter [imported] - Arabidopsis thaliana
gi|4218010|gb|AAD12218.1| putative sugar transporter
[Arabidopsis thaliana] gi|20197812|gb|AAM15258.1|
putative sugar transporter [Arabidopsis thaliana]
Length = 508
Score = 172 bits (436), Expect = 8e-43
Identities = 81/119 (68%), Positives = 102/119 (85%)
Frame = +2
Query: 83 IFGYVTGVMAGALLFIKEELGINDMQVQLLGGILNVCALPACMVAGRTSDYVGRRYTIIL 262
IFGY TGVM+GA +FI+++L IND Q+++L GILN+CAL + AG+TSD +GRRYTI L
Sbjct: 35 IFGYDTGVMSGAQIFIRDDLKINDTQIEVLAGILNLCALVGSLTAGKTSDVIGRRYTIAL 94
Query: 263 SAVILLLGSILMGYGPSFPILMIGRCTAGLGVGLALIIAPVYSTEISLPSNRGFLTSLP 439
SAVI L+GS+LMGYGP++P+LM+GRC AG+GVG AL+IAPVYS EIS S+RGFLTSLP
Sbjct: 95 SAVIFLVGSVLMGYGPNYPVLMVGRCIAGVGVGFALMIAPVYSAEISSASHRGFLTSLP 153
>ref|NP_195385.1| sugar transporter like protein; protein id: At4g36670.1
[Arabidopsis thaliana] gi|25308953|pir||A85433 sugar
transporter like protein [imported] - Arabidopsis
thaliana gi|2464913|emb|CAB16808.1| sugar transporter
like protein [Arabidopsis thaliana]
gi|7270615|emb|CAB80333.1| sugar transporter like
protein [Arabidopsis thaliana]
Length = 493
Score = 166 bits (419), Expect = 8e-41
Identities = 75/119 (63%), Positives = 103/119 (86%)
Frame = +2
Query: 83 IFGYVTGVMAGALLFIKEELGINDMQVQLLGGILNVCALPACMVAGRTSDYVGRRYTIIL 262
IFGY TGVM+GA++FI+E+L ND+Q+++L GILN+CAL ++AGRTSD +GRRYTI+L
Sbjct: 30 IFGYDTGVMSGAMVFIEEDLKTNDVQIEVLTGILNLCALVGSLLAGRTSDIIGRRYTIVL 89
Query: 263 SAVILLLGSILMGYGPSFPILMIGRCTAGLGVGLALIIAPVYSTEISLPSNRGFLTSLP 439
++++ +LGSILMG+GP++P+L+ GRCTAGLGVG AL++APVYS EI+ S+RG L SLP
Sbjct: 90 ASILFMLGSILMGWGPNYPVLLSGRCTAGLGVGFALMVAPVYSAEIATASHRGLLASLP 148
>gb|AAL58131.1|AC093093_4 putative mannitol transporter protein [Oryza sativa (japonica
cultivar-group)]
Length = 506
Score = 149 bits (376), Expect = 8e-36
Identities = 80/144 (55%), Positives = 100/144 (68%)
Frame = +2
Query: 8 NEKSRRKLNTVCLCLRDGLSLLYLAIFGYVTGVMAGALLFIKEELGINDMQVQLLGGILN 187
N++ + K C + +S+L GY TGVM+GA+LFIKE+L ND QVQ+L GILN
Sbjct: 7 NDERKNKYAVGCSIIGSIISVL----MGYDTGVMSGAMLFIKEDLKTNDTQVQVLAGILN 62
Query: 188 VCALPACMVAGRTSDYVGRRYTIILSAVILLLGSILMGYGPSFPILMIGRCTAGLGVGLA 367
VCAL + AGR SD VGRR TI L+A I L+GS+LMG P+F L+ GRC AG+GVG A
Sbjct: 63 VCALVGSLTAGRVSDCVGRRLTISLAACIFLVGSVLMGLAPNFATLLAGRCVAGVGVGYA 122
Query: 368 LIIAPVYSTEISLPSNRGFLTSLP 439
L+IAPVY+ EI+ RG LTSLP
Sbjct: 123 LMIAPVYAAEIASADIRGSLTSLP 146
>gb|AAK13147.1|AC083945_22 Putative sugar transporter [Oryza sativa]
Length = 574
Score = 149 bits (376), Expect = 8e-36
Identities = 80/144 (55%), Positives = 100/144 (68%)
Frame = +2
Query: 8 NEKSRRKLNTVCLCLRDGLSLLYLAIFGYVTGVMAGALLFIKEELGINDMQVQLLGGILN 187
N++ + K C + +S+L GY TGVM+GA+LFIKE+L ND QVQ+L GILN
Sbjct: 75 NDERKNKYAVGCSIIGSIISVL----MGYDTGVMSGAMLFIKEDLKTNDTQVQVLAGILN 130
Query: 188 VCALPACMVAGRTSDYVGRRYTIILSAVILLLGSILMGYGPSFPILMIGRCTAGLGVGLA 367
VCAL + AGR SD VGRR TI L+A I L+GS+LMG P+F L+ GRC AG+GVG A
Sbjct: 131 VCALVGSLTAGRVSDCVGRRLTISLAACIFLVGSVLMGLAPNFATLLAGRCVAGVGVGYA 190
Query: 368 LIIAPVYSTEISLPSNRGFLTSLP 439
L+IAPVY+ EI+ RG LTSLP
Sbjct: 191 LMIAPVYAAEIASADIRGSLTSLP 214
>ref|NP_188513.1| sugar transport, putative; protein id: At3g18830.1 [Arabidopsis
thaliana] gi|9293909|dbj|BAB01812.1| sugar transporter
protein [Arabidopsis thaliana]
Length = 539
Score = 135 bits (340), Expect = 1e-31
Identities = 64/119 (53%), Positives = 87/119 (72%)
Frame = +2
Query: 83 IFGYVTGVMAGALLFIKEELGINDMQVQLLGGILNVCALPACMVAGRTSDYVGRRYTIIL 262
+ GY GVM+GA+++IK +L IND+Q+ +L G LN+ +L AGRTSD++GRRYTI+L
Sbjct: 49 LLGYDIGVMSGAMIYIKRDLKINDLQIGILAGSLNIYSLIGSCAAGRTSDWIGRRYTIVL 108
Query: 263 SAVILLLGSILMGYGPSFPILMIGRCTAGLGVGLALIIAPVYSTEISLPSNRGFLTSLP 439
+ I G+ILMG P++ LM GR AG+GVG AL+IAPVY+ E+S S+RGFL S P
Sbjct: 109 AGAIFFAGAILMGLSPNYAFLMFGRFIAGIGVGYALMIAPVYTAEVSPASSRGFLNSFP 167
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 405,516,284
Number of Sequences: 1393205
Number of extensions: 9117063
Number of successful extensions: 26643
Number of sequences better than 10.0: 1778
Number of HSP's better than 10.0 without gapping: 25519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26450
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 6689237688
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
