KMC002834A_c04
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC002834A_C04 KMC002834A_c04
tggaGCCAATAAGGAAATGGGGTCTTTATTTTCATTTAAATATAGGTTACTTCAAAGACC
TCGTAGGATCTAGTACATAGGCAAATAAATGAACAACGCCAATCCACGAGGACAAAGCTT
AACATCATTCAATGCAAAGCCACAAACATAAAAGCTTTTATAAAGATTAACTATTGACCC
TACACAAATGAAAAAATAACACCAATAGTAGGGGTCGAGTTTGGCTTAAGCAAAGATCTC
ATTCATGGGCTTGGGTTCGAGTTTGGCCTTCTCCAAATCCTGCAGTTTCTTCTCCTTAGC
CAGCTTCTTCATCCGAGCAAGCTCAATGTCCTTGCTCATCTTCCTCCTGTACATTTCAGC
AAATGTGATTGGTTCTTCCATTACTGACTTCTCTCCCTCTCGAACCTTCAAAGGGTATAC
AGTTGCATCTGGTGCCGGGTTCTGGAATGTGGCGATTGATAAACGGCTTGAGTTTGAGTT
CACCACTGCTTGGTGATCAGCGTTCTTGAACCTTCCATTGCTCAGATAATGACCATGGTC
ACCAAGATTGACAACAAAAGCTCCTTCAACAGGCTGCACAGTGATCCATGTCTTCCCATT
ATCCCTAGTAGCTTGAAGCCCACCCACTTGATCCTGAAGCAGCAGAGTAATGGTGCCAGG
ATCAGTGTGTCGCTTCAGCCCAAGAGTGAGGTCAGGTTGAGGACATTTTGGGTAATAATT
CACCACAACCTTCTGGTCCATATCCACACACGCCTTTGTTAGAGCCTCTTTCTCTAACCC
CATTGCCTCAGACAACACCTCCAACAGCTTGCATGCTAAACCCATCAGCTTCTCGCTGTA
CTCCTCCGTCACCGCCTTCCACCCTGCTGGGGTGTCCGGCCACCGTGAGTAGTCCCTATT
CCTGATTGGATATGAAAAGTATGTCACTATCTCTCTCCAATCCTGCACTGATTCTCCTTG
GAGGTGGCTGGAGACGATGAAACCACCCTTTTTGCCACCGGTCATGTCAAACCGAAGCTT
CTCCTCCGGTGGAAGAGCAAAGAACTCTTTAGCAAGAGTGGTCATGTGGGAAACCAATTC
AGTGTCGACGCCATGATCAACAACCTGAAAAATACCCCAATTCTCACAAGCCTCCACAAT
CTTGTTGCAAATCTCCGATCTCCGGCCATCGACCTCGTCGATTCCGGCAAGGGAAATGAC
CGGGATCTCATTGCTGAAATTGTTGTAAGCGACCTTTGGGCGCTCGTCTTCGTCACGGAC
GAAGCTGGACTCAAGGGTGTTTTGTTGAGCCAGTGTGGTGAGAGTTTTGGGTTTGAATGA
TGCCATTGTTGGATGGTTAGTTAGAGTTTCAGAGTTTGTTT


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC002834A_C04 KMC002834A_c04
         (1361 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAC10996.1| flavanone 3-hydroxylase [Nierembergia sp. NB17]       635  0.0
gb|AAC49929.1| flavanone 3beta-hydroxylase [Petunia x hybrida]        633  e-180
pir||A42110 flavanone 3 beta-hydroxylase - garden petunia (fragm...   633  e-180
sp|Q07353|FL3H_PETHY Naringenin,2-oxoglutarate 3-dioxygenase (Fl...   632  e-180
gb|AAD56577.1|AF184270_1 flavanone 3-hydroxylase [Daucus carota]      629  e-179

>dbj|BAC10996.1| flavanone 3-hydroxylase [Nierembergia sp. NB17]
          Length = 367

 Score =  635 bits (1638), Expect = 0.0
 Identities = 310/365 (84%), Positives = 339/365 (91%), Gaps = 4/365 (1%)
 Frame = -3

Query: 1311 PKTLTTLAQQNTLESSFVRDEDERPKVAYNNFSNEIPVISLAGIDE-VDGRRSEICNKIV 1135
            P TLT LA++ TL++SF+RDEDERPKVAYN FSNEIP+ISL GID+   G+R EIC+KIV
Sbjct: 3    PSTLTALAEEKTLQTSFIRDEDERPKVAYNQFSNEIPIISLKGIDDDQSGKRGEICDKIV 62

Query: 1134 EACENWGIFQVVDHGVDTELVSHMTTLAKEFFALPPEEKLRFDMTGGKKGGFIVSSHLQG 955
            +ACE+WGIFQVVDHGVD EL++ MTTLAKEFFALPPEEKLRFDM+GGKKGGFIVSSHLQG
Sbjct: 63   KACEDWGIFQVVDHGVDVELINKMTTLAKEFFALPPEEKLRFDMSGGKKGGFIVSSHLQG 122

Query: 954  ESVQDWREIVTYFSYPIRNRDYSRWPDTPAGWKAVTEEYSEKLMGLACKLLEVLSEAMGL 775
            E+VQDWREIVTYFSYPIR RDYSRWP+ P GW AVTE+YS+ LM LACKLLEVLSEAMGL
Sbjct: 123  EAVQDWREIVTYFSYPIRARDYSRWPNKPEGWIAVTEKYSDTLMALACKLLEVLSEAMGL 182

Query: 774  EKEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDNG 595
            EKEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQAT+DNG
Sbjct: 183  EKEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNG 242

Query: 594  KTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPDATVY 415
            KTWITVQPVEGAFVVNLGDHGH+LSNGRFKNADHQAVVNSNSSRLSIATFQNPAP+A VY
Sbjct: 243  KTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEAIVY 302

Query: 414  PLKVREGEKSVMEEPITFAEMYRRKMSKDIELARMKKLAKEKKLQ---DLEKAKLEPKPM 244
            PLK+REGEKS+MEEPITFAEMYR+KMSKD+ELAR+KKLAKE++LQ     EK KLE KP+
Sbjct: 303  PLKIREGEKSIMEEPITFAEMYRKKMSKDLELARLKKLAKEQQLQAEVAAEKTKLESKPI 362

Query: 243  NEIFA 229
             EIFA
Sbjct: 363  EEIFA 367

>gb|AAC49929.1| flavanone 3beta-hydroxylase [Petunia x hybrida]
          Length = 366

 Score =  633 bits (1632), Expect = e-180
 Identities = 306/364 (84%), Positives = 337/364 (92%), Gaps = 3/364 (0%)
 Frame = -3

Query: 1311 PKTLTTLAQQNTLESSFVRDEDERPKVAYNNFSNEIPVISLAGIDEVDGRRSEICNKIVE 1132
            P TLT LA++ TL++SF+RDEDERPKVAYN FSNEIP+ISL GID+  G+R+EIC+KIV+
Sbjct: 3    PSTLTALAEEKTLQTSFIRDEDERPKVAYNQFSNEIPIISLEGIDDETGKRAEICDKIVK 62

Query: 1131 ACENWGIFQVVDHGVDTELVSHMTTLAKEFFALPPEEKLRFDMTGGKKGGFIVSSHLQGE 952
            ACE+WG+FQVVDHGVD EL+S MTT AKEFFALPPEEKLRFDM+GGKKGGFIVSSHLQGE
Sbjct: 63   ACEDWGVFQVVDHGVDAELISQMTTFAKEFFALPPEEKLRFDMSGGKKGGFIVSSHLQGE 122

Query: 951  SVQDWREIVTYFSYPIRNRDYSRWPDTPAGWKAVTEEYSEKLMGLACKLLEVLSEAMGLE 772
             VQDWREIVTYFSYP R RDYSRWPD P GW AVT++YSEKLM LACKLL+VLSEAMGLE
Sbjct: 123  VVQDWREIVTYFSYPTRARDYSRWPDKPEGWIAVTQKYSEKLMELACKLLDVLSEAMGLE 182

Query: 771  KEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDNGK 592
            KEALTKACVDMDQKVVVN+YPKCP+PDLTLGLKRHTDPGTITLLLQDQVGGLQAT+DNGK
Sbjct: 183  KEALTKACVDMDQKVVVNFYPKCPEPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGK 242

Query: 591  TWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPDATVYP 412
            TWITVQPVEGAFVVNLGDHGH+LSNGRFKNADHQAVVNSNSSRLSIATFQNPAP+A VYP
Sbjct: 243  TWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEAIVYP 302

Query: 411  LKVREGEKSVMEEPITFAEMYRRKMSKDIELARMKKLAKEKKLQ---DLEKAKLEPKPMN 241
            LK+REGEKS+M+EPITFAEMYRRKMSKD+ELAR+KK AKE++LQ     EKAKLE KP+ 
Sbjct: 303  LKIREGEKSIMDEPITFAEMYRRKMSKDLELARLKKQAKEQQLQAEVAAEKAKLESKPIE 362

Query: 240  EIFA 229
            EI A
Sbjct: 363  EILA 366

>pir||A42110 flavanone 3 beta-hydroxylase - garden petunia (fragment)
          Length = 369

 Score =  633 bits (1632), Expect = e-180
 Identities = 306/364 (84%), Positives = 337/364 (92%), Gaps = 3/364 (0%)
 Frame = -3

Query: 1311 PKTLTTLAQQNTLESSFVRDEDERPKVAYNNFSNEIPVISLAGIDEVDGRRSEICNKIVE 1132
            P TLT LA++ TL++SF+RDEDERPKVAYN FSNEIP+ISL GID+  G+R+EIC+KIV+
Sbjct: 6    PSTLTALAEEKTLQTSFIRDEDERPKVAYNQFSNEIPIISLEGIDDETGKRAEICDKIVK 65

Query: 1131 ACENWGIFQVVDHGVDTELVSHMTTLAKEFFALPPEEKLRFDMTGGKKGGFIVSSHLQGE 952
            ACE+WG+FQVVDHGVD EL+S MTT AKEFFALPPEEKLRFDM+GGKKGGFIVSSHLQGE
Sbjct: 66   ACEDWGVFQVVDHGVDAELISQMTTFAKEFFALPPEEKLRFDMSGGKKGGFIVSSHLQGE 125

Query: 951  SVQDWREIVTYFSYPIRNRDYSRWPDTPAGWKAVTEEYSEKLMGLACKLLEVLSEAMGLE 772
             VQDWREIVTYFSYP R RDYSRWPD P GW AVT++YSEKLM LACKLL+VLSEAMGLE
Sbjct: 126  VVQDWREIVTYFSYPTRARDYSRWPDKPEGWIAVTQKYSEKLMELACKLLDVLSEAMGLE 185

Query: 771  KEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDNGK 592
            KEALTKACVDMDQKVVVN+YPKCP+PDLTLGLKRHTDPGTITLLLQDQVGGLQAT+DNGK
Sbjct: 186  KEALTKACVDMDQKVVVNFYPKCPEPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGK 245

Query: 591  TWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPDATVYP 412
            TWITVQPVEGAFVVNLGDHGH+LSNGRFKNADHQAVVNSNSSRLSIATFQNPAP+A VYP
Sbjct: 246  TWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEAIVYP 305

Query: 411  LKVREGEKSVMEEPITFAEMYRRKMSKDIELARMKKLAKEKKLQ---DLEKAKLEPKPMN 241
            LK+REGEKS+M+EPITFAEMYRRKMSKD+ELAR+KK AKE++LQ     EKAKLE KP+ 
Sbjct: 306  LKIREGEKSIMDEPITFAEMYRRKMSKDLELARLKKQAKEQQLQAEVAAEKAKLESKPIE 365

Query: 240  EIFA 229
            EI A
Sbjct: 366  EILA 369

>sp|Q07353|FL3H_PETHY Naringenin,2-oxoglutarate 3-dioxygenase (Flavonone-3-hydroxylase)
            (F3H) (FHT) gi|100398|pir||S16780 naringenin
            3-dioxygenase (EC 1.14.11.9) - garden petunia
            gi|1345562|emb|CAA43027.1| naringenin,2-oxoglutarate
            3-dioxygenase [Petunia x hybrida]
          Length = 369

 Score =  632 bits (1629), Expect = e-180
 Identities = 305/364 (83%), Positives = 337/364 (91%), Gaps = 3/364 (0%)
 Frame = -3

Query: 1311 PKTLTTLAQQNTLESSFVRDEDERPKVAYNNFSNEIPVISLAGIDEVDGRRSEICNKIVE 1132
            P TLT LA++ TL++SF+RDEDERPKVAYN FSNEIP+ISL GID+  G+R+EIC+KIV+
Sbjct: 6    PSTLTALAEEKTLQTSFIRDEDERPKVAYNQFSNEIPIISLEGIDDETGKRAEICDKIVK 65

Query: 1131 ACENWGIFQVVDHGVDTELVSHMTTLAKEFFALPPEEKLRFDMTGGKKGGFIVSSHLQGE 952
            ACE+WG+FQVVDHGVD E++S MTT AKEFFALPPEEKLRFDM+GGKKGGFIVSSHLQGE
Sbjct: 66   ACEDWGVFQVVDHGVDAEVISQMTTFAKEFFALPPEEKLRFDMSGGKKGGFIVSSHLQGE 125

Query: 951  SVQDWREIVTYFSYPIRNRDYSRWPDTPAGWKAVTEEYSEKLMGLACKLLEVLSEAMGLE 772
             VQDWREIVTYFSYP R RDYSRWPD P GW AVT++YSEKLM LACKLL+VLSEAMGLE
Sbjct: 126  VVQDWREIVTYFSYPTRARDYSRWPDKPEGWIAVTQKYSEKLMELACKLLDVLSEAMGLE 185

Query: 771  KEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDNGK 592
            KEALTKACVDMDQKVVVN+YPKCP+PDLTLGLKRHTDPGTITLLLQDQVGGLQAT+DNGK
Sbjct: 186  KEALTKACVDMDQKVVVNFYPKCPEPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGK 245

Query: 591  TWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPDATVYP 412
            TWITVQPVEGAFVVNLGDHGH+LSNGRFKNADHQAVVNSNSSRLSIATFQNPAP+A VYP
Sbjct: 246  TWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEAIVYP 305

Query: 411  LKVREGEKSVMEEPITFAEMYRRKMSKDIELARMKKLAKEKKLQ---DLEKAKLEPKPMN 241
            LK+REGEKS+M+EPITFAEMYRRKMSKD+ELAR+KK AKE++LQ     EKAKLE KP+ 
Sbjct: 306  LKIREGEKSIMDEPITFAEMYRRKMSKDLELARLKKQAKEQQLQAEVAAEKAKLESKPIE 365

Query: 240  EIFA 229
            EI A
Sbjct: 366  EILA 369

>gb|AAD56577.1|AF184270_1 flavanone 3-hydroxylase [Daucus carota]
          Length = 366

 Score =  629 bits (1623), Expect = e-179
 Identities = 314/365 (86%), Positives = 333/365 (91%), Gaps = 4/365 (1%)
 Frame = -3

Query: 1311 PKTLTTLAQQNTLESSFVRDEDERPKVAYNNFSNEIPVISLAGIDEVDGRRSEICNKIVE 1132
            P TLT LAQ+ TL S FVRDEDERPKVAYN FS+EIPVISLAGID+   RRSEIC KIVE
Sbjct: 3    PSTLTALAQEKTLNSRFVRDEDERPKVAYNQFSDEIPVISLAGIDDA-ARRSEICRKIVE 61

Query: 1131 ACENWGIFQVVDHGVDTELVSHMTTLAKEFFALPPEEKLRFDMTGGKKGGFIVSSHLQGE 952
            ACE+WGIFQVVDHGVDT L++ MT LA+EFFALP  EKLRFDMTGGKKGGFIVSSHLQGE
Sbjct: 62   ACEDWGIFQVVDHGVDTALIAEMTRLAREFFALPAAEKLRFDMTGGKKGGFIVSSHLQGE 121

Query: 951  SVQDWREIVTYFSYPIRNRDYSRWPDTPAGWKAVTEEYSEKLMGLACKLLEVLSEAMGLE 772
            +VQDWREIVTYFSYPIR RDYSRWPD P GW++ T EYSEKLMGL CKLLEVLSEAMGL+
Sbjct: 122  AVQDWREIVTYFSYPIRARDYSRWPDKPEGWRSATGEYSEKLMGLGCKLLEVLSEAMGLD 181

Query: 771  KEALTKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDNGK 592
            KEA+TKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRD GK
Sbjct: 182  KEAITKACVDMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGK 241

Query: 591  TWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPDATVYP 412
            TWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSN SRLSIATFQNPAP+ATVYP
Sbjct: 242  TWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNYSRLSIATFQNPAPNATVYP 301

Query: 411  LKVREGEKSVMEEPITFAEMYRRKMSKDIELARMKKLAKEKKLQDLE--KAKLE--PKPM 244
            LK+REGEK+VMEEPITFAEMYRRKMSKDIE+A +KKLAKEK LQD E  KAKL+  PK  
Sbjct: 302  LKIREGEKAVMEEPITFAEMYRRKMSKDIEVANLKKLAKEKLLQDQEWDKAKLQMKPKSA 361

Query: 243  NEIFA 229
            +EIFA
Sbjct: 362  DEIFA 366

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,278,900,898
Number of Sequences: 1393205
Number of extensions: 31518676
Number of successful extensions: 126118
Number of sequences better than 10.0: 843
Number of HSP's better than 10.0 without gapping: 102124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 121484
length of database: 448,689,247
effective HSP length: 127
effective length of database: 271,752,212
effective search space used: 88591221112
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 SPDL095f03_f BP057977 1 504
2 MPD061d08_f AV774082 25 513
3 GNLf017h04 BP075804 34 516
4 SPD086c04_f BP050851 34 600
5 SPDL050b08_f BP055128 35 414
6 SPD084e12_f BP050720 37 620
7 MF058h06_f BP031383 37 584
8 MF059b08_f BP031395 37 229
9 MF079b04_f BP032461 37 563
10 MFBL008a12_f BP041652 37 426
11 MF009g01_f BP028708 37 539
12 MF096g12_f BP033319 37 528
13 MF038d06_f BP030284 37 519
14 MFBL043a07_f BP043419 37 516
15 MF018f05_f BP029207 37 383
16 MFB089f01_f BP040513 40 602
17 MFB038d02_f BP036780 41 581
18 MFB004h07_f BP034221 41 596
19 MFB085a09_f BP040186 42 578
20 MFB024b05_f BP035712 42 526
21 MF026a06_f BP029613 42 115
22 MF047c02_f BP030760 42 496
23 MF019d11_f BP029257 42 181
24 SPD008e01_f BP044639 43 620
25 MFB086a06_f BP040253 44 493
26 MFB080b11_f BP039833 45 560
27 SPD018f10_f BP045434 46 397
28 MFB038a04_f BP036751 46 498
29 MFB086h08_f BP040320 46 539
30 SPD020f04_f BP045590 46 562
31 SPDL028d08_f BP053736 46 572
32 MFB079e08_f BP039784 47 507
33 SPDL039e01_f BP054455 54 452
34 SPD058a12_f BP048588 55 571
35 SPDL078h10_f BP056878 65 243
36 MFB013f04_f BP034886 169 745
37 MFB020h04_f BP035454 448 944
38 MFB055f08_f BP038007 468 974
39 MFB004a03_f BP034152 809 1391
40 MFB068c09_f BP038924 906 1399
41 MFB072b07_f BP039221 936 1388




Lotus japonicus
Kazusa DNA Research Institute