Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002831A_C01 KMC002831A_c01
(434 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO00842.1| putative protein [Arabidopsis thaliana] 99 9e-23
ref|NP_199801.1| putative protein; protein id: At5g49900.1 [Arab... 99 9e-23
gb|AAM19831.1| AT4g10060/T5L19_190 [Arabidopsis thaliana] gi|241... 95 2e-19
ref|NP_192744.2| putative protein; protein id: At4g10060.1, supp... 95 2e-19
pir||T04010 hypothetical protein T5L19.190 - Arabidopsis thalian... 95 2e-19
>gb|AAO00842.1| putative protein [Arabidopsis thaliana]
Length = 957
Score = 99.0 bits (245), Expect(2) = 9e-23
Identities = 44/62 (70%), Positives = 49/62 (78%)
Frame = -1
Query: 434 DMAFPTAGGIYEAAWSDDGLGYSFPTPEAWNTDDEYRSLCYMRPLPIWAMPWALSRAQAH 255
+MAF TA GIYEAAWS+ GLGYSF TPE+WNT DEYRSL YMRPL IWAM WAL++
Sbjct: 839 EMAFQTASGIYEAAWSETGLGYSFQTPESWNTVDEYRSLTYMRPLAIWAMQWALTKTSQK 898
Query: 254 SE 249
E
Sbjct: 899 QE 900
Score = 27.7 bits (60), Expect(2) = 9e-23
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = -3
Query: 192 F*KLLTLSQVKEEKASRSLFQVIYDFTCQRMI 97
F ++ L + E +++S Q ++D+TC+RM+
Sbjct: 925 FSRVSRLLSLPNEASAKSTLQTLFDYTCRRMM 956
>ref|NP_199801.1| putative protein; protein id: At5g49900.1 [Arabidopsis thaliana]
gi|8777421|dbj|BAA97011.1|
gene_id:K9P8.4~pir||T04010~strong similarity to unknown
protein [Arabidopsis thaliana]
Length = 928
Score = 99.0 bits (245), Expect(2) = 9e-23
Identities = 44/62 (70%), Positives = 49/62 (78%)
Frame = -1
Query: 434 DMAFPTAGGIYEAAWSDDGLGYSFPTPEAWNTDDEYRSLCYMRPLPIWAMPWALSRAQAH 255
+MAF TA GIYEAAWS+ GLGYSF TPE+WNT DEYRSL YMRPL IWAM WAL++
Sbjct: 810 EMAFQTASGIYEAAWSETGLGYSFQTPESWNTVDEYRSLTYMRPLAIWAMQWALTKTSQK 869
Query: 254 SE 249
E
Sbjct: 870 QE 871
Score = 27.7 bits (60), Expect(2) = 9e-23
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = -3
Query: 192 F*KLLTLSQVKEEKASRSLFQVIYDFTCQRMI 97
F ++ L + E +++S Q ++D+TC+RM+
Sbjct: 896 FSRVSRLLSLPNEASAKSTLQTLFDYTCRRMM 927
>gb|AAM19831.1| AT4g10060/T5L19_190 [Arabidopsis thaliana]
gi|24111431|gb|AAN46866.1| At4g10060/T5L19_190
[Arabidopsis thaliana]
Length = 922
Score = 95.1 bits (235), Expect = 2e-19
Identities = 42/62 (67%), Positives = 47/62 (75%)
Frame = -1
Query: 434 DMAFPTAGGIYEAAWSDDGLGYSFPTPEAWNTDDEYRSLCYMRPLPIWAMPWALSRAQAH 255
+ F TA GIYEA WSD GL SF TPEAWN +DEYRSLCYMRPL IWA+ WAL+R Q+
Sbjct: 804 EKGFQTASGIYEAIWSDRGLSCSFQTPEAWNMNDEYRSLCYMRPLAIWAIQWALTRTQSF 863
Query: 254 SE 249
E
Sbjct: 864 GE 865
>ref|NP_192744.2| putative protein; protein id: At4g10060.1, supported by cDNA:
gi_20453180 [Arabidopsis thaliana]
Length = 531
Score = 95.1 bits (235), Expect = 2e-19
Identities = 42/62 (67%), Positives = 47/62 (75%)
Frame = -1
Query: 434 DMAFPTAGGIYEAAWSDDGLGYSFPTPEAWNTDDEYRSLCYMRPLPIWAMPWALSRAQAH 255
+ F TA GIYEA WSD GL SF TPEAWN +DEYRSLCYMRPL IWA+ WAL+R Q+
Sbjct: 413 EKGFQTASGIYEAIWSDRGLSCSFQTPEAWNMNDEYRSLCYMRPLAIWAIQWALTRTQSF 472
Query: 254 SE 249
E
Sbjct: 473 GE 474
>pir||T04010 hypothetical protein T5L19.190 - Arabidopsis thaliana
gi|4539009|emb|CAB39630.1| putative protein [Arabidopsis
thaliana] gi|7267702|emb|CAB78129.1| putative protein
[Arabidopsis thaliana]
Length = 750
Score = 95.1 bits (235), Expect = 2e-19
Identities = 42/62 (67%), Positives = 47/62 (75%)
Frame = -1
Query: 434 DMAFPTAGGIYEAAWSDDGLGYSFPTPEAWNTDDEYRSLCYMRPLPIWAMPWALSRAQAH 255
+ F TA GIYEA WSD GL SF TPEAWN +DEYRSLCYMRPL IWA+ WAL+R Q+
Sbjct: 632 EKGFQTASGIYEAIWSDRGLSCSFQTPEAWNMNDEYRSLCYMRPLAIWAIQWALTRTQSF 691
Query: 254 SE 249
E
Sbjct: 692 GE 693
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 383,351,958
Number of Sequences: 1393205
Number of extensions: 8023292
Number of successful extensions: 23168
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 22574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23162
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 6756111528
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
