Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002814A_C01 KMC002814A_c01
(542 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL32528.1| protein kinase, putative [Arabidopsis thaliana] 82 4e-15
ref|NP_187827.1| protein kinase, putative; protein id: At3g12200... 82 4e-15
dbj|BAB02494.1| kinase-like protein [Arabidopsis thaliana] 79 5e-14
ref|NP_188722.1| putative serine/threonine protein kinase; prote... 79 5e-14
dbj|BAB63817.1| putative kinase [Oryza sativa (japonica cultivar... 73 2e-12
>gb|AAL32528.1| protein kinase, putative [Arabidopsis thaliana]
Length = 571
Score = 82.0 bits (201), Expect = 4e-15
Identities = 47/98 (47%), Positives = 61/98 (61%)
Frame = -2
Query: 514 ENDKANVIDKTPNDISLSRHVLVGGGDKTKRRVDISCQQRADALESLLELCAQLLKQGKL 335
E DKA ++ T +++S L G + +RADALE LLE CA L+KQ K
Sbjct: 481 EGDKAKMVKLTASEMSSVLSKLTKLGPPQSK-------ERADALECLLEKCAGLVKQEKY 533
Query: 334 EELAAVLRPFGEDVVSSRETAIWLTKSLISSQKINPET 221
EELA +L PFGED VS+R+TAIW K+L+SS K+N T
Sbjct: 534 EELAGLLTPFGEDGVSARDTAIWFAKTLLSSDKLNQGT 571
>ref|NP_187827.1| protein kinase, putative; protein id: At3g12200.1, supported by
cDNA: gi_17064747 [Arabidopsis thaliana]
gi|12322040|gb|AAG51063.1|AC069472_3 protein kinase,
putative; 15231-11854 [Arabidopsis thaliana]
gi|15795140|dbj|BAB03128.1| contains similarity to
protein kinase~gene_id:MQC3.2 [Arabidopsis thaliana]
Length = 571
Score = 82.0 bits (201), Expect = 4e-15
Identities = 47/98 (47%), Positives = 61/98 (61%)
Frame = -2
Query: 514 ENDKANVIDKTPNDISLSRHVLVGGGDKTKRRVDISCQQRADALESLLELCAQLLKQGKL 335
E DKA ++ T +++S L G + +RADALE LLE CA L+KQ K
Sbjct: 481 EGDKAKMVKLTASEMSSVLSKLTKLGPPQSK-------ERADALECLLEKCAGLVKQEKY 533
Query: 334 EELAAVLRPFGEDVVSSRETAIWLTKSLISSQKINPET 221
EELA +L PFGED VS+R+TAIW K+L+SS K+N T
Sbjct: 534 EELAGLLTPFGEDGVSARDTAIWFAKTLLSSDKLNQGT 571
>dbj|BAB02494.1| kinase-like protein [Arabidopsis thaliana]
Length = 416
Score = 78.6 bits (192), Expect = 5e-14
Identities = 37/56 (66%), Positives = 49/56 (87%)
Frame = -2
Query: 403 QQRADALESLLELCAQLLKQGKLEELAAVLRPFGEDVVSSRETAIWLTKSLISSQK 236
++RA+ALESLLELCA LL+Q K +EL VL+PFG++ VSSRETAIWLTKSL++ ++
Sbjct: 352 EERAEALESLLELCAGLLRQEKFDELEGVLKPFGDETVSSRETAIWLTKSLMNVKR 407
>ref|NP_188722.1| putative serine/threonine protein kinase; protein id: At3g20860.1
[Arabidopsis thaliana]
Length = 427
Score = 78.6 bits (192), Expect = 5e-14
Identities = 37/56 (66%), Positives = 49/56 (87%)
Frame = -2
Query: 403 QQRADALESLLELCAQLLKQGKLEELAAVLRPFGEDVVSSRETAIWLTKSLISSQK 236
++RA+ALESLLELCA LL+Q K +EL VL+PFG++ VSSRETAIWLTKSL++ ++
Sbjct: 363 EERAEALESLLELCAGLLRQEKFDELEGVLKPFGDETVSSRETAIWLTKSLMNVKR 418
>dbj|BAB63817.1| putative kinase [Oryza sativa (japonica cultivar-group)]
gi|21644639|dbj|BAC01197.1| putative kinase [Oryza sativa
(japonica cultivar-group)]
Length = 943
Score = 73.2 bits (178), Expect = 2e-12
Identities = 39/60 (65%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = -2
Query: 430 TKRRVDI-SCQQRADALESLLELCAQLLKQGKLEELAAVLRPFGEDVVSSRETAIWLTKS 254
TK +D+ S +QRA+ALE LLEL A LL+ +LEELA VL+PFG+D VS RETAIWL KS
Sbjct: 870 TKEILDVKSFRQRAEALEGLLELSADLLQHNRLEELAVVLKPFGKDKVSPRETAIWLAKS 929
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 440,259,184
Number of Sequences: 1393205
Number of extensions: 8958872
Number of successful extensions: 41124
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41056
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18750593680
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
