Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002802A_C01 KMC002802A_c01
(935 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB09567.1| disease resistance protein-like [Arabidopsis tha... 172 4e-51
ref|NP_197270.1| disease resistance protein (TIR-NBS-LRR class),... 172 4e-51
ref|NP_198509.1| disease resistance protein (TIR-NBS-LRR class),... 174 4e-47
dbj|BAB11635.1| TMV resistance protein N [Arabidopsis thaliana] 174 4e-47
ref|NP_193686.1| disease resistance protein (TIR-NBS-LRR class),... 170 1e-46
>dbj|BAB09567.1| disease resistance protein-like [Arabidopsis thaliana]
Length = 1295
Score = 172 bits (435), Expect(2) = 4e-51
Identities = 91/223 (40%), Positives = 141/223 (62%), Gaps = 1/223 (0%)
Frame = -1
Query: 926 IYEVKEMSFEDSLQLFSLNAFKRNDPL-ETYIDLSKKLLSYAKGIPLALKVLGLFLYGRE 750
+Y+VK + +++LQLF AF+ L + +LS + ++YA G+PLAL+VLG FLY R
Sbjct: 338 VYKVKCLPKKEALQLFCNYAFREEIILPHGFEELSVQAVNYASGLPLALRVLGSFLYRRS 397
Query: 749 RKAWESQLVKLEKLPDPEIINVLKLSYDGLDDDQKDIFLDIACFYLGHLEESVAQTLDSC 570
+ WES L +L+ P +I+ VL++SYDGLD+ +K IFL I+CFY + V + LD C
Sbjct: 398 QIEWESTLARLKTYPHSDIMEVLRVSYDGLDEQEKAIFLYISCFYNMKQVDYVRKLLDLC 457
Query: 569 GFFADIGMEVLKDRCLISILEGRIVMHDLIEVMGKEIVRQQCPNDPGKRSRLWNDDQTYD 390
G+ A+IG+ +L ++ LI G + +HDL+E MG+E+VRQQ N+P +R LW+ +
Sbjct: 458 GYAAEIGITILTEKSLIVESNGCVKIHDLLEQMGRELVRQQAVNNPAQRLLLWDPEDICH 517
Query: 389 VLGKNKGTDAIQSIFLYTCPIKIVNLHAETFKYMTNLRMLQFY 261
+L +N GT ++ I L I V F+ ++NL++L FY
Sbjct: 518 LLSENSGTQLVEGISLNLSEISEVFASDRAFEGLSNLKLLNFY 560
Score = 52.8 bits (125), Expect(2) = 4e-51
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = -2
Query: 235 SNVILPASLGSLPNHLQFLRWDGFPLRYFPLDFCPQNLVKLDMRDSHLEHFGRKIRIYQT 56
+ V LP L LP L++LRWDG+PL+ P F P+ LV+L M +S+LE I+ +
Sbjct: 568 TRVHLPNGLSYLPRKLRYLRWDGYPLKTMPSRFFPEFLVELCMSNSNLEKLWDGIQPLRN 627
Query: 55 LKR 47
LK+
Sbjct: 628 LKK 630
>ref|NP_197270.1| disease resistance protein (TIR-NBS-LRR class), putative; protein id:
At5g17680.1 [Arabidopsis thaliana]
Length = 1294
Score = 172 bits (435), Expect(2) = 4e-51
Identities = 91/223 (40%), Positives = 141/223 (62%), Gaps = 1/223 (0%)
Frame = -1
Query: 926 IYEVKEMSFEDSLQLFSLNAFKRNDPL-ETYIDLSKKLLSYAKGIPLALKVLGLFLYGRE 750
+Y+VK + +++LQLF AF+ L + +LS + ++YA G+PLAL+VLG FLY R
Sbjct: 337 VYKVKCLPKKEALQLFCNYAFREEIILPHGFEELSVQAVNYASGLPLALRVLGSFLYRRS 396
Query: 749 RKAWESQLVKLEKLPDPEIINVLKLSYDGLDDDQKDIFLDIACFYLGHLEESVAQTLDSC 570
+ WES L +L+ P +I+ VL++SYDGLD+ +K IFL I+CFY + V + LD C
Sbjct: 397 QIEWESTLARLKTYPHSDIMEVLRVSYDGLDEQEKAIFLYISCFYNMKQVDYVRKLLDLC 456
Query: 569 GFFADIGMEVLKDRCLISILEGRIVMHDLIEVMGKEIVRQQCPNDPGKRSRLWNDDQTYD 390
G+ A+IG+ +L ++ LI G + +HDL+E MG+E+VRQQ N+P +R LW+ +
Sbjct: 457 GYAAEIGITILTEKSLIVESNGCVKIHDLLEQMGRELVRQQAVNNPAQRLLLWDPEDICH 516
Query: 389 VLGKNKGTDAIQSIFLYTCPIKIVNLHAETFKYMTNLRMLQFY 261
+L +N GT ++ I L I V F+ ++NL++L FY
Sbjct: 517 LLSENSGTQLVEGISLNLSEISEVFASDRAFEGLSNLKLLNFY 559
Score = 52.8 bits (125), Expect(2) = 4e-51
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = -2
Query: 235 SNVILPASLGSLPNHLQFLRWDGFPLRYFPLDFCPQNLVKLDMRDSHLEHFGRKIRIYQT 56
+ V LP L LP L++LRWDG+PL+ P F P+ LV+L M +S+LE I+ +
Sbjct: 567 TRVHLPNGLSYLPRKLRYLRWDGYPLKTMPSRFFPEFLVELCMSNSNLEKLWDGIQPLRN 626
Query: 55 LKR 47
LK+
Sbjct: 627 LKK 629
>ref|NP_198509.1| disease resistance protein (TIR-NBS-LRR class), putative; protein id:
At5g36930.1 [Arabidopsis thaliana]
Length = 1164
Score = 174 bits (442), Expect(2) = 4e-47
Identities = 89/223 (39%), Positives = 141/223 (62%)
Frame = -1
Query: 935 ADEIYEVKEMSFEDSLQLFSLNAFKRNDPLETYIDLSKKLLSYAKGIPLALKVLGLFLYG 756
A+ Y KE+ ++SL+LFS +AF+ ++P + ++ S+++++Y G+PLA++VLG FL
Sbjct: 335 AEGSYSPKELDGDESLELFSWHAFRTSEPPKEFLQHSEEVVTYCAGLPLAVEVLGAFLIE 394
Query: 755 RERKAWESQLVKLEKLPDPEIINVLKLSYDGLDDDQKDIFLDIACFYLGHLEESVAQTLD 576
R + WES L L+++P+ I L++S++ L +QKD+FLDIACF++G VA LD
Sbjct: 395 RSIREWESTLKLLKRIPNDNIQAKLQISFNALTIEQKDVFLDIACFFIGVDSYYVACILD 454
Query: 575 SCGFFADIGMEVLKDRCLISILEGRIVMHDLIEVMGKEIVRQQCPNDPGKRSRLWNDDQT 396
C + DI + +L +RCLI+I I+MHDL+ MG++IVR+ P G+RSRLW+ +
Sbjct: 455 GCNLYPDIVLSLLMERCLITISGNNIMMHDLLRDMGRQIVREISPKKCGERSRLWSHNDV 514
Query: 395 YDVLGKNKGTDAIQSIFLYTCPIKIVNLHAETFKYMTNLRMLQ 267
VL K GT+AI+ + L + E F M LR+L+
Sbjct: 515 VGVLKKKSGTNAIEGLSLKADVMDFQYFEVEAFAKMQELRLLE 557
Score = 36.6 bits (83), Expect(2) = 4e-47
Identities = 18/49 (36%), Positives = 28/49 (56%)
Frame = -2
Query: 229 VILPASLGSLPNHLQFLRWDGFPLRYFPLDFCPQNLVKLDMRDSHLEHF 83
V L S P L++L W GF L FP++ ++L LD++ S+L+ F
Sbjct: 561 VDLNGSYEHFPKDLRWLCWHGFSLECFPINLSLESLAALDLQYSNLKRF 609
>dbj|BAB11635.1| TMV resistance protein N [Arabidopsis thaliana]
Length = 1130
Score = 174 bits (442), Expect(2) = 4e-47
Identities = 89/223 (39%), Positives = 141/223 (62%)
Frame = -1
Query: 935 ADEIYEVKEMSFEDSLQLFSLNAFKRNDPLETYIDLSKKLLSYAKGIPLALKVLGLFLYG 756
A+ Y KE+ ++SL+LFS +AF+ ++P + ++ S+++++Y G+PLA++VLG FL
Sbjct: 340 AEGSYSPKELDGDESLELFSWHAFRTSEPPKEFLQHSEEVVTYCAGLPLAVEVLGAFLIE 399
Query: 755 RERKAWESQLVKLEKLPDPEIINVLKLSYDGLDDDQKDIFLDIACFYLGHLEESVAQTLD 576
R + WES L L+++P+ I L++S++ L +QKD+FLDIACF++G VA LD
Sbjct: 400 RSIREWESTLKLLKRIPNDNIQAKLQISFNALTIEQKDVFLDIACFFIGVDSYYVACILD 459
Query: 575 SCGFFADIGMEVLKDRCLISILEGRIVMHDLIEVMGKEIVRQQCPNDPGKRSRLWNDDQT 396
C + DI + +L +RCLI+I I+MHDL+ MG++IVR+ P G+RSRLW+ +
Sbjct: 460 GCNLYPDIVLSLLMERCLITISGNNIMMHDLLRDMGRQIVREISPKKCGERSRLWSHNDV 519
Query: 395 YDVLGKNKGTDAIQSIFLYTCPIKIVNLHAETFKYMTNLRMLQ 267
VL K GT+AI+ + L + E F M LR+L+
Sbjct: 520 VGVLKKKSGTNAIEGLSLKADVMDFQYFEVEAFAKMQELRLLE 562
Score = 36.6 bits (83), Expect(2) = 4e-47
Identities = 18/49 (36%), Positives = 28/49 (56%)
Frame = -2
Query: 229 VILPASLGSLPNHLQFLRWDGFPLRYFPLDFCPQNLVKLDMRDSHLEHF 83
V L S P L++L W GF L FP++ ++L LD++ S+L+ F
Sbjct: 566 VDLNGSYEHFPKDLRWLCWHGFSLECFPINLSLESLAALDLQYSNLKRF 614
>ref|NP_193686.1| disease resistance protein (TIR-NBS-LRR class), putative; protein id:
At4g19510.1 [Arabidopsis thaliana] gi|7484912|pir||T06144
disease resistance protein homolog F24J7.70 - Arabidopsis
thaliana gi|2853078|emb|CAA16928.1| TMV resistance
protein N-like [Arabidopsis thaliana]
gi|7268747|emb|CAB78953.1| TMV resistance protein N-like
[Arabidopsis thaliana]
Length = 1164
Score = 170 bits (430), Expect(2) = 1e-46
Identities = 94/249 (37%), Positives = 139/249 (55%)
Frame = -1
Query: 935 ADEIYEVKEMSFEDSLQLFSLNAFKRNDPLETYIDLSKKLLSYAKGIPLALKVLGLFLYG 756
AD Y V ++ ++++LF L F + P E ++DLS + YAKG+PLALK+LG L
Sbjct: 344 ADATYVVPRLNDREAMELFCLQVFGNHYPTEEFVDLSNDFVCYAKGLPLALKLLGKGLLT 403
Query: 755 RERKAWESQLVKLEKLPDPEIINVLKLSYDGLDDDQKDIFLDIACFYLGHLEESVAQTLD 576
+ W+ +L L+ PD E+ LK SY LDDDQK +FLDIACF+ + V+ L
Sbjct: 404 HDINYWKKKLEFLQVNPDKELQKELKSSYKALDDDQKSVFLDIACFFRSEKADFVSSILK 463
Query: 575 SCGFFADIGMEVLKDRCLISILEGRIVMHDLIEVMGKEIVRQQCPNDPGKRSRLWNDDQT 396
S A M L+++CL++I RI MHDL+ MGKEI +++ G+R RLWN
Sbjct: 464 SDDIDAKDVMRELEEKCLVTISYDRIEMHDLLHAMGKEIGKEKSIRKAGERRRLWNHKDI 523
Query: 395 YDVLGKNKGTDAIQSIFLYTCPIKIVNLHAETFKYMTNLRMLQFYKSRVCSLALECDPSC 216
D+L N GT+ ++ IFL ++ + L F ++ L+ L+F+ S CS + D
Sbjct: 524 RDILEHNTGTECVRGIFLNMSEVRRIKLFPAAFTMLSKLKFLKFHSSH-CSQWCDNDHIF 582
Query: 215 ISWKSPESF 189
K P+ F
Sbjct: 583 QCSKVPDHF 591
Score = 39.7 bits (91), Expect(2) = 1e-46
Identities = 16/37 (43%), Positives = 23/37 (61%)
Frame = -2
Query: 199 PNHLQFLRWDGFPLRYFPLDFCPQNLVKLDMRDSHLE 89
P+ L +L W G+P P DF P+ LV L +R SH++
Sbjct: 592 PDELVYLHWQGYPYDCLPSDFDPKELVDLSLRYSHIK 628
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 788,094,336
Number of Sequences: 1393205
Number of extensions: 17721522
Number of successful extensions: 44682
Number of sequences better than 10.0: 619
Number of HSP's better than 10.0 without gapping: 42302
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44279
length of database: 448,689,247
effective HSP length: 123
effective length of database: 277,325,032
effective search space used: 52137106016
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
