Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002801A_C01 KMC002801A_c01
(660 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB09286.1| receptor protein kinase-like protein [Arabidopsi... 89 1e-29
pir||T05050 protein kinase homolog M3E9.30 - Arabidopsis thalian... 82 2e-27
gb|AAL32011.1|AF436829_1 AT4g26540/M3E9_30 [Arabidopsis thaliana] 80 1e-26
emb|CAC20842.1| receptor protein kinase [Pinus sylvestris] 62 1e-15
dbj|BAB64771.1| putative receptor protein kinase [Oryza sativa (... 56 8e-14
>dbj|BAB09286.1| receptor protein kinase-like protein [Arabidopsis thaliana]
Length = 1015
Score = 88.6 bits (218), Expect(2) = 1e-29
Identities = 43/63 (68%), Positives = 51/63 (80%)
Frame = -1
Query: 546 ILDPKLRGRTGPTMHEILQTLAVSFLCVSAQAEDRPTMKDIVAMLKEIRPVEASKTDPDV 367
ILDP+LRGR P MHE+LQTLAVSFLCVS +A DRP MKDIVAMLKEIR + +++ D+
Sbjct: 918 ILDPRLRGRADPIMHEMLQTLAVSFLCVSNKASDRPMMKDIVAMLKEIRQFDMDRSESDM 977
Query: 366 RKG 358
KG
Sbjct: 978 IKG 980
Score = 63.5 bits (153), Expect(2) = 1e-29
Identities = 26/35 (74%), Positives = 32/35 (91%)
Frame = -3
Query: 658 LLEVLPGRHPLEPTLPGGSHLVQWVRNHLASQRDP 554
LLEVL G+HPL+P LPGG+HLVQWVR+HLA ++DP
Sbjct: 881 LLEVLTGKHPLDPDLPGGAHLVQWVRDHLAGKKDP 915
>pir||T05050 protein kinase homolog M3E9.30 - Arabidopsis thaliana
gi|2982452|emb|CAA18216.1| receptor protein kinase-like
protein [Arabidopsis thaliana] gi|7269506|emb|CAB79509.1|
receptor protein kinase-like protein [Arabidopsis
thaliana]
Length = 1029
Score = 82.4 bits (202), Expect(2) = 2e-27
Identities = 51/127 (40%), Positives = 68/127 (53%)
Frame = -1
Query: 564 KETHVHILDPKLRGRTGPTMHEILQTLAVSFLCVSAQAEDRPTMKDIVAMLKEIRPVEAS 385
K+ +LDP+L GRT MHE+LQTLAV+FLCVS +A +RP MKD+VAML EIR ++
Sbjct: 926 KKDPSRLLDPRLDGRTDSIMHEMLQTLAVAFLCVSNKANERPLMKDVVAMLTEIRHIDVG 985
Query: 384 KTDPDVRKGFGHRILIACLVPQ*NVLESLLASLEPRSLCFF**TCL*ILSKS*NLVSHGS 205
+++ + K G S EP+ +S + SHGS
Sbjct: 986 RSETEKIKAGG------------------CGSKEPQQ----------FMSNEKIINSHGS 1017
Query: 204 SNCSF*F 184
SNCSF F
Sbjct: 1018 SNCSFAF 1024
Score = 62.0 bits (149), Expect(2) = 2e-27
Identities = 25/35 (71%), Positives = 32/35 (91%)
Frame = -3
Query: 658 LLEVLPGRHPLEPTLPGGSHLVQWVRNHLASQRDP 554
LLEVL G+HPL+P LPGG+HLV+WVR+HLA ++DP
Sbjct: 895 LLEVLTGKHPLDPDLPGGAHLVKWVRDHLAEKKDP 929
>gb|AAL32011.1|AF436829_1 AT4g26540/M3E9_30 [Arabidopsis thaliana]
Length = 1096
Score = 80.1 bits (196), Expect(2) = 1e-26
Identities = 50/127 (39%), Positives = 67/127 (52%)
Frame = -1
Query: 564 KETHVHILDPKLRGRTGPTMHEILQTLAVSFLCVSAQAEDRPTMKDIVAMLKEIRPVEAS 385
K+ +LDP+L GRT MHE+LQTLAV+FLCVS +A +RP MKD+VAML EIR ++
Sbjct: 988 KKDPSRLLDPRLDGRTDSIMHEMLQTLAVAFLCVSNKANERPLMKDVVAMLTEIRHIDVG 1047
Query: 384 KTDPDVRKGFGHRILIACLVPQ*NVLESLLASLEPRSLCFF**TCL*ILSKS*NLVSHGS 205
+++ + K G S EP+ +S + SHGS
Sbjct: 1048 RSETEKIKAGG------------------CGSKEPQQ----------FMSNEKIINSHGS 1079
Query: 204 SNCSF*F 184
SNCS F
Sbjct: 1080 SNCSLRF 1086
Score = 62.0 bits (149), Expect(2) = 1e-26
Identities = 25/35 (71%), Positives = 32/35 (91%)
Frame = -3
Query: 658 LLEVLPGRHPLEPTLPGGSHLVQWVRNHLASQRDP 554
LLEVL G+HPL+P LPGG+HLV+WVR+HLA ++DP
Sbjct: 957 LLEVLTGKHPLDPDLPGGAHLVKWVRDHLAEKKDP 991
>emb|CAC20842.1| receptor protein kinase [Pinus sylvestris]
Length = 1145
Score = 62.4 bits (150), Expect(2) = 1e-15
Identities = 26/49 (53%), Positives = 39/49 (79%)
Frame = -1
Query: 546 ILDPKLRGRTGPTMHEILQTLAVSFLCVSAQAEDRPTMKDIVAMLKEIR 400
++DP+L+GR + E+LQ L V+FLCV++ ++RPTMKD+ A+LKEIR
Sbjct: 1032 VIDPRLQGRPDTQIQEMLQVLGVAFLCVNSNPDERPTMKDVAALLKEIR 1080
Score = 42.4 bits (98), Expect(2) = 1e-15
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = -3
Query: 658 LLEVLPGRHPLEPTLPGGSHLVQWVRNHLASQR 560
LLEV+ G+ P++PT+P G HLV+W R+ + S +
Sbjct: 993 LLEVVTGKQPIDPTIPEGVHLVEWARDAVQSNK 1025
>dbj|BAB64771.1| putative receptor protein kinase [Oryza sativa (japonica
cultivar-group)]
Length = 1178
Score = 55.8 bits (133), Expect(2) = 8e-14
Identities = 23/55 (41%), Positives = 37/55 (66%)
Frame = -1
Query: 564 KETHVHILDPKLRGRTGPTMHEILQTLAVSFLCVSAQAEDRPTMKDIVAMLKEIR 400
K ++D +L+GR+ + E+LQ L ++ LC S + EDRPTMKD+ A+L+ +R
Sbjct: 1012 KRDPAEVIDSRLQGRSDTQVQEMLQALGIALLCASTRPEDRPTMKDVAALLRGLR 1066
Score = 42.7 bits (99), Expect(2) = 8e-14
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = -3
Query: 658 LLEVLPGRHPLEPTLPGGSHLVQWVRNHLASQRDP 554
LLE++ GR P+E G +VQWVR HL +RDP
Sbjct: 981 LLEIITGRRPIEAAFGEGQTVVQWVREHLHRKRDP 1015
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 549,840,551
Number of Sequences: 1393205
Number of extensions: 11006796
Number of successful extensions: 20895
Number of sequences better than 10.0: 350
Number of HSP's better than 10.0 without gapping: 20287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20878
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28289785200
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
