Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002798A_C01 KMC002798A_c01
(735 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM22614.1|AF403710_1 disulfide oxidoreductase [Ehrlichia canis] 32 9.3
>gb|AAM22614.1|AF403710_1 disulfide oxidoreductase [Ehrlichia canis]
Length = 246
Score = 32.0 bits (71), Expect = 9.3
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Frame = +3
Query: 216 KIVKSIENKPYNSAGKILSQITDVEWCTYKC*LRYLADKSFFFCQCR*ELMQSG----IW 383
K +EN Y SAG S+I VE+ Y C + + +++Q G I+
Sbjct: 75 KYKSELENTSYPSAGNKDSKIVFVEFFDYSCGYCKMMSEDMK------QIVQDGKVHVIF 128
Query: 384 STFSPMGAHLTLQSSVLIIFPTSLSLHVLWPNMLWAFIYTAFHAR*Q 524
F +G S L + +L++H++ PN F Y A H + Q
Sbjct: 129 RDFPILG------ESSLKVAQAALAVHMINPNKYIDFYYAALHYKQQ 169
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 620,049,074
Number of Sequences: 1393205
Number of extensions: 13597831
Number of successful extensions: 30486
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 29181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30481
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 34906576228
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
