Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002784A_C01 KMC002784A_c01
(518 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_175587.1| IAA-Ala hydrolase (IAR3); protein id: At1g51760... 108 5e-23
emb|CAA73905.1| JR3 protein [Arabidopsis thaliana] 100 1e-20
ref|NP_175589.1| auxin conjugate hydrolase (ILL5); protein id: A... 96 2e-19
gb|AAL47552.1| IAA-amino acid conjugate hydrolase-like protein [... 93 2e-18
emb|CAA09330.1| gr1-protein [Arabidopsis thaliana] 93 2e-18
>ref|NP_175587.1| IAA-Ala hydrolase (IAR3); protein id: At1g51760.1, supported by
cDNA: gi_14030706 [Arabidopsis thaliana]
gi|25319488|pir||F96556 IAA-Ala hydrolase (IAR3)
[imported] - Arabidopsis thaliana
gi|3421384|gb|AAC32192.1| IAA-Ala hydrolase; IAA-amino
acid hydrolase [Arabidopsis thaliana]
gi|12321681|gb|AAG50883.1|AC025294_21 IAA-Ala hydrolase
(IAR3) [Arabidopsis thaliana]
gi|14030707|gb|AAK53028.1|AF375444_1 At1g51760/F19C24_4
[Arabidopsis thaliana] gi|23506081|gb|AAN28900.1|
At1g51760/F19C24_4 [Arabidopsis thaliana]
Length = 440
Score = 108 bits (269), Expect = 5e-23
Identities = 55/123 (44%), Positives = 82/123 (65%), Gaps = 2/123 (1%)
Frame = -2
Query: 517 TVNFFGEVYPPYPPTINDGGLHEQFRYVAINLLGIDKAHIDMPPMTAAEDFSFYQKVMPG 338
TV+F E P +PPT+ND LH+ F+ V+ ++LGI+ +++M P+ +EDFSFYQ+ +PG
Sbjct: 320 TVDFIEEEKPFFPPTVNDKALHQFFKNVSGDMLGIEN-YVEMQPLMGSEDFSFYQQAIPG 378
Query: 337 YFFFLGMQKDHRDHFL--HSPYLMIDEEGLPYGAALHASLAINYLQKYHQDRPMEEGKNR 164
+F F+GMQ R HSPY ++EE LPYGA+LHAS+A YL + + + + +
Sbjct: 379 HFSFVGMQNKARSPMASPHSPYFEVNEELLPYGASLHASMATRYLLEL-KASTLNKSNKK 437
Query: 163 DEL 155
DEL
Sbjct: 438 DEL 440
>emb|CAA73905.1| JR3 protein [Arabidopsis thaliana]
Length = 444
Score = 100 bits (248), Expect = 1e-20
Identities = 50/111 (45%), Positives = 75/111 (67%), Gaps = 2/111 (1%)
Frame = -2
Query: 481 PPTINDGGLHEQFRYVAINLLGIDKAHIDMPPMTAAEDFSFYQKVMPGYFFFLGMQKDHR 302
PPT+ND LH+ F+ V+ ++LGI+ +++M P+ +EDFSFYQ+ +PG+F F+GMQ R
Sbjct: 336 PPTVNDKALHQFFKNVSGDMLGIEN-YVEMQPLMGSEDFSFYQQAIPGHFSFVGMQNKAR 394
Query: 301 DHFL--HSPYLMIDEEGLPYGAALHASLAINYLQKYHQDRPMEEGKNRDEL 155
HSPY ++EE LPYGA+LHAS+A YL + + + + +DEL
Sbjct: 395 SPMASPHSPYFEVNEELLPYGASLHASMATRYLLEL-KASTLNKSNKKDEL 444
>ref|NP_175589.1| auxin conjugate hydrolase (ILL5); protein id: At1g51780.1
[Arabidopsis thaliana] gi|25319490|pir||H96556 auxin
conjugate hydrolase (ILL5) [imported] - Arabidopsis
thaliana gi|5725649|gb|AAD48152.1| auxin conjugate
hydrolase [Arabidopsis thaliana]
gi|12321667|gb|AAG50869.1|AC025294_7 auxin conjugate
hydrolase (ILL5) [Arabidopsis thaliana]
Length = 435
Score = 96.3 bits (238), Expect = 2e-19
Identities = 50/123 (40%), Positives = 77/123 (61%), Gaps = 2/123 (1%)
Frame = -2
Query: 517 TVNFFGEVYPPYPPTINDGGLHEQFRYVAINLLGIDKAHIDMPPMTAAEDFSFYQKVMPG 338
TV+F + PP+PPT+N+ LH ++ V++++LGI+ +++ P+ +EDF+FYQ+ +PG
Sbjct: 320 TVDFLEDETPPFPPTVNNKTLHLFYKNVSVDMLGIEN-YVETLPVMVSEDFAFYQQAIPG 378
Query: 337 YFFFLGMQKDHRDHFL--HSPYLMIDEEGLPYGAALHASLAINYLQKYHQDRPMEEGKNR 164
+F F+GMQ HSP+ ++EE LPYGA+L ASLA YL N+
Sbjct: 379 HFSFVGMQNKSHSPMANPHSPFFEVNEELLPYGASLLASLATRYL------LDSSSSPNK 432
Query: 163 DEL 155
DEL
Sbjct: 433 DEL 435
>gb|AAL47552.1| IAA-amino acid conjugate hydrolase-like protein [Arabidopsis
thaliana]
Length = 441
Score = 93.2 bits (230), Expect = 2e-18
Identities = 47/109 (43%), Positives = 66/109 (60%), Gaps = 2/109 (1%)
Frame = -2
Query: 517 TVNFFGEVYPPYPPTINDGGLHEQFRYVAINLLGIDKAHIDMPPMTAAEDFSFYQKVMPG 338
TVNFF + YPPT N+ + + V I+LLG D P M AEDF+FY +++P
Sbjct: 333 TVNFFEKQNAIYPPTTNNDATYNHLKKVTIDLLG-DSHFTLAPQMMGAEDFAFYSEIIPA 391
Query: 337 YFFFLGMQKDHRD--HFLHSPYLMIDEEGLPYGAALHASLAINYLQKYH 197
F+F+G++ + H HSP+ MIDE+ LP GAA+HA++A YL H
Sbjct: 392 AFYFIGIRNEELGSVHIAHSPHFMIDEDSLPVGAAVHAAVAERYLNDKH 440
>emb|CAA09330.1| gr1-protein [Arabidopsis thaliana]
Length = 464
Score = 93.2 bits (230), Expect = 2e-18
Identities = 47/109 (43%), Positives = 66/109 (60%), Gaps = 2/109 (1%)
Frame = -2
Query: 517 TVNFFGEVYPPYPPTINDGGLHEQFRYVAINLLGIDKAHIDMPPMTAAEDFSFYQKVMPG 338
TVNFF + YPPT N+ + + V I+LLG D P M AEDF+FY +++P
Sbjct: 356 TVNFFEKQNAIYPPTTNNDATYNHLKKVTIDLLG-DSHFTLAPQMMGAEDFAFYSEIIPA 414
Query: 337 YFFFLGMQKDHRD--HFLHSPYLMIDEEGLPYGAALHASLAINYLQKYH 197
F+F+G++ + H HSP+ MIDE+ LP GAA+HA++A YL H
Sbjct: 415 AFYFIGIRNEELGSVHIAHSPHFMIDEDSLPVGAAVHAAVAERYLNDKH 463
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 425,357,830
Number of Sequences: 1393205
Number of extensions: 8662012
Number of successful extensions: 18479
Number of sequences better than 10.0: 183
Number of HSP's better than 10.0 without gapping: 17912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18343
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16442828304
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
