Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002770A_C01 KMC002770A_c01
(603 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM62411.1|AF480489_1 EDS1 [Nicotiana tabacum] 151 7e-36
gb|AAL85347.1|AF479625_1 EDS1-like protein [Nicotiana benthamiana] 143 1e-33
pir||T48859 disease resistance protein EDS1 [validated] - Arabid... 123 2e-27
ref|NP_190392.1| disease resistance protein EDS1; protein id: At... 121 8e-27
ref|NP_190391.1| EDS1-like protein; protein id: At3g48080.1, sup... 104 8e-22
>gb|AAM62411.1|AF480489_1 EDS1 [Nicotiana tabacum]
Length = 606
Score = 151 bits (381), Expect = 7e-36
Identities = 77/143 (53%), Positives = 91/143 (62%), Gaps = 3/143 (2%)
Frame = -1
Query: 603 PDEFEGNKYWIEQGTRFRRLVEPLDIANYYRHPRE---GAYMDKGRPRRYRYAQRWLEHS 433
PD FEG K WI+ GT+FRR VEPLDIANYYRH + G YM + RP+RYR+ QRWLEH
Sbjct: 465 PDRFEGRKEWIQLGTQFRRQVEPLDIANYYRHSKNEDTGPYMIRARPKRYRFTQRWLEHD 524
Query: 432 QGRTEEAISESCFWAEVEDLWNMATSDKKCSFENVKERVVRVEEQIRVWIGKGELGNDVF 253
+ SESCFWAEVE+L N S V+ R++ +E+ RVW G LG+DVF
Sbjct: 525 KRVQTGERSESCFWAEVEELRNK-------SIMEVQNRILSLEKTARVWSQSGLLGDDVF 577
Query: 252 LEGSTLVKWWKFLPWQHKQYSCI 184
ST KWWK LP QHK S I
Sbjct: 578 FPESTFTKWWKQLPTQHKLASWI 600
>gb|AAL85347.1|AF479625_1 EDS1-like protein [Nicotiana benthamiana]
Length = 607
Score = 143 bits (361), Expect = 1e-33
Identities = 74/147 (50%), Positives = 90/147 (60%), Gaps = 3/147 (2%)
Frame = -1
Query: 603 PDEFEGNKYWIEQGTRFRRLVEPLDIANYYRHPRE---GAYMDKGRPRRYRYAQRWLEHS 433
PD FEG K WI+ GT+FRR VEPLDIANYYRH + G YM + RP+RYR+ QRWLEH
Sbjct: 466 PDSFEGRKEWIKLGTQFRRQVEPLDIANYYRHLKNEDTGPYMIRARPKRYRFTQRWLEHE 525
Query: 432 QGRTEEAISESCFWAEVEDLWNMATSDKKCSFENVKERVVRVEEQIRVWIGKGELGNDVF 253
+ SESCFWAEVE+L N + V+ R++ +E + W G LG+DVF
Sbjct: 526 ERVQTGERSESCFWAEVEELRNKPIME-------VQNRILSLETKAWDWSQSGLLGDDVF 578
Query: 252 LEGSTLVKWWKFLPWQHKQYSCIRSLV 172
ST KWWK LP QH+ S I V
Sbjct: 579 FPESTFTKWWKQLPTQHRMTSWISGKV 605
>pir||T48859 disease resistance protein EDS1 [validated] - Arabidopsis thaliana
gi|4454567|gb|AAD20950.1| EDS1 [Arabidopsis thaliana]
Length = 623
Score = 123 bits (309), Expect = 2e-27
Identities = 77/176 (43%), Positives = 94/176 (52%), Gaps = 35/176 (19%)
Frame = -1
Query: 603 PDEFEGNKYWIEQGTRFRRLVEPLDIANYYRHPRE---GAYMDKGRPRRYRYAQRWLEH- 436
PDEFEG+ WI+ TR+RRLVEPLDIANY+RH + G YM +GRP RY YAQR EH
Sbjct: 445 PDEFEGDIDWIKLATRYRRLVEPLDIANYHRHLKNEDTGPYMKRGRPTRYIYAQRGYEHH 504
Query: 435 --------------------SQGRTEEAISE----------SCFWAEVEDLWNMATSDKK 346
+ G E I E SCFWAEVE+L K
Sbjct: 505 ILKPNGMIAEDVFWNKVNGLNLGLQLEEIQETLKNSGSECGSCFWAEVEEL-------KG 557
Query: 345 CSFENVKERVVRVEEQIRVWIGKGELG-NDVFLEGSTLVKWWKFLPWQHKQYSCIR 181
+E V+ RV +E +R WI GE+ ++FLEGST KWW LP HK +S +R
Sbjct: 558 KPYEEVEVRVKTLEGMLREWITAGEVDEKEIFLEGSTFRKWWITLPKNHKSHSPLR 613
>ref|NP_190392.1| disease resistance protein EDS1; protein id: At3g48090.1, supported
by cDNA: gi_15028150 [Arabidopsis thaliana]
gi|7487125|pir||T06674 hypothetical protein T17F15.40 -
Arabidopsis thaliana gi|4678319|emb|CAB41130.1| putative
protein [Arabidopsis thaliana]
gi|15028151|gb|AAK76699.1| putative disease resistance
protein EDS1 [Arabidopsis thaliana]
gi|23297426|gb|AAN12884.1| putative disease resistance
protein EDS1 [Arabidopsis thaliana]
Length = 623
Score = 121 bits (303), Expect = 8e-27
Identities = 76/176 (43%), Positives = 94/176 (53%), Gaps = 35/176 (19%)
Frame = -1
Query: 603 PDEFEGNKYWIEQGTRFRRLVEPLDIANYYRHPRE---GAYMDKGRPRRYRYAQRWLEH- 436
PDEFEG+ WI+ TR+RRLVEPLDIANY+RH + G YM +GRP RY YAQR EH
Sbjct: 445 PDEFEGDIDWIKLATRYRRLVEPLDIANYHRHLKNEDTGPYMKRGRPTRYIYAQRGYEHY 504
Query: 435 --------------------SQGRTEEAISE----------SCFWAEVEDLWNMATSDKK 346
+ G E I E SCFWAEVE+L K
Sbjct: 505 ILKPNGMIAEDVFWNKVNGLNLGLQLEEIQETLKNSGSECGSCFWAEVEEL-------KG 557
Query: 345 CSFENVKERVVRVEEQIRVWIGKGELGN-DVFLEGSTLVKWWKFLPWQHKQYSCIR 181
+E V+ RV +E + WI GE+ + ++FLEGST KWW LP HK +S +R
Sbjct: 558 KPYEEVEVRVKTLEGMLGEWITDGEVDDKEIFLEGSTFRKWWITLPKNHKSHSPLR 613
>ref|NP_190391.1| EDS1-like protein; protein id: At3g48080.1, supported by cDNA:
gi_18087549 [Arabidopsis thaliana]
gi|7487126|pir||T06675 hypothetical protein T17F15.50 -
Arabidopsis thaliana gi|4678320|emb|CAB41131.1|
hypothetical protein [Arabidopsis thaliana]
gi|18087550|gb|AAL58907.1|AF462816_1 AT3g48080/T17F15_50
[Arabidopsis thaliana] gi|23463067|gb|AAN33203.1|
At3g48080/T17F15_50 [Arabidopsis thaliana]
Length = 629
Score = 104 bits (260), Expect = 8e-22
Identities = 65/169 (38%), Positives = 85/169 (49%), Gaps = 34/169 (20%)
Frame = -1
Query: 603 PDEFEGNKYWIEQGTRFRRLVEPLDIANYY---RHPREGAYMDKGRPRRYRYAQRWLEHS 433
PD FEG++ WI T++RRL+EPLDI+NY+ ++ G YM GRP RY+YAQR EH
Sbjct: 450 PDGFEGSRGWINLATQYRRLIEPLDISNYHGQLKNEDTGPYMLHGRPSRYKYAQRGYEHD 509
Query: 432 ------------------------QGRTEEAISE------SCFWAEVEDLWNMATSDKKC 343
Q +E + SCFWAEVE+L K
Sbjct: 510 ILKPTGMIAKDVFWSKVNGLNLGLQQDIQEILKNSGSECGSCFWAEVEEL-------KGK 562
Query: 342 SFENVKERVVRVEEQIRVWIGKGELG-NDVFLEGSTLVKWWKFLPWQHK 199
+E V+ R +E + WI GE+ ++FLEGST KWW LP HK
Sbjct: 563 PYEEVQVRFKTLEGLLEGWIKDGEVDEKEIFLEGSTFRKWWNTLPDSHK 611
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 589,449,360
Number of Sequences: 1393205
Number of extensions: 14291801
Number of successful extensions: 48538
Number of sequences better than 10.0: 112
Number of HSP's better than 10.0 without gapping: 43384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47656
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23711793746
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
