Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC002765A_C01 KMC002765A_c01
(589 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB91929.1| putative receptor-like kinase [Oryza sativa (jap... 52 7e-06
ref|NP_197965.1| receptor-like protein kinase - like; protein id... 50 2e-05
dbj|BAC06203.1| putative receptor protein kinase [Oryza sativa (... 43 0.003
gb|AAC36318.1| leucine-rich receptor-like protein kinase [Malus ... 43 0.003
gb|AAM77879.1|AF509746_1 receptor-like kinase [Hordeum vulgare s... 41 0.010
>dbj|BAB91929.1| putative receptor-like kinase [Oryza sativa (japonica
cultivar-group)]
Length = 1063
Score = 51.6 bits (122), Expect = 7e-06
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Frame = -3
Query: 569 YLDEMCSIFKLGVMCTATLPGSRPSMKEVLKVLLSYSD---PRANGEKKVGFYDVVPLL 402
Y DE+ +F+LGVMCT P SRP+MK+VL++L+ S+ + E Y+V PLL
Sbjct: 974 YSDEIEVVFRLGVMCTGATPASRPTMKDVLQILVKCSEQTHQKCKAESGQEEYEVAPLL 1032
>ref|NP_197965.1| receptor-like protein kinase - like; protein id: At5g25930.1
[Arabidopsis thaliana]
gi|5107831|gb|AAD40144.1|AF149413_25 contains similarity
to protein kinase domains (Pfam F00069, Score=162.6,
E=6.8e-45, N=1) and leucien rich repeats (Pfam PF00560,
Score=210.7, E=2.2e-59, N=10) [Arabidopsis thaliana]
gi|28393326|gb|AAO42089.1| putative receptor protein
kinase [Arabidopsis thaliana]
Length = 1005
Score = 50.1 bits (118), Expect = 2e-05
Identities = 24/39 (61%), Positives = 29/39 (73%)
Frame = -3
Query: 587 EIAEPSYLDEMCSIFKLGVMCTATLPGSRPSMKEVLKVL 471
+I E S + M ++FKLG+MCT TLP RPSMKEVL VL
Sbjct: 926 DIKEASTTEAMTTVFKLGLMCTNTLPSHRPSMKEVLYVL 964
>dbj|BAC06203.1| putative receptor protein kinase [Oryza sativa (japonica
cultivar-group)] gi|22202670|dbj|BAC07328.1| putative
receptor protein kinase [Oryza sativa (japonica
cultivar-group)]
Length = 964
Score = 43.1 bits (100), Expect = 0.003
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = -3
Query: 563 DEMCSIFKLGVMCTATLPGSRPSMKEVLKVLLSYSDPRANGEKK 432
++M + + ++CT LP RP+M+EV+K+L+ ANG+ K
Sbjct: 915 EDMTKVLNIAILCTVQLPSERPTMREVVKMLIDIDSISANGKAK 958
>gb|AAC36318.1| leucine-rich receptor-like protein kinase [Malus x domestica]
Length = 999
Score = 42.7 bits (99), Expect = 0.003
Identities = 16/36 (44%), Positives = 27/36 (74%)
Frame = -3
Query: 578 EPSYLDEMCSIFKLGVMCTATLPGSRPSMKEVLKVL 471
E Y +E+C + +G++CT+ LP +RPSM+ V+K+L
Sbjct: 931 ESCYKEEVCKVLNIGLLCTSPLPINRPSMRRVVKLL 966
>gb|AAM77879.1|AF509746_1 receptor-like kinase [Hordeum vulgare subsp. spontaneum]
Length = 327
Score = 41.2 bits (95), Expect = 0.010
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = -3
Query: 569 YLDEMCSIFKLGVMCTATLPGSRPSMKEVLKVL 471
Y+D+M S+F+LGV CT P RPSM VLK L
Sbjct: 279 YIDDMASVFRLGVDCTVVDPQQRPSMHMVLKRL 311
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 490,054,678
Number of Sequences: 1393205
Number of extensions: 9777473
Number of successful extensions: 23307
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 22400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23293
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22283372436
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
